HitPredict

Interactor 1: LSM1 (O15116)
U6 snRNA-associated Sm-like protein LSm1 (Cancer-associated Sm-like) (Small nuclear ribonuclear CaSm)
Gene: LSM1

Interactor 2: DDX20 (Q9UHI6)
Probable ATP-dependent RNA helicase DDX20 (EC 3.6.1.15) (EC 3.6.4.13) (Component of gems 3) (DEAD box protein 20) (DEAD box protein DP 103) (Gemin-3)
Gene: DDX20

Species: Homo sapiens

Source: biogrid

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.38	0.60	0.479

Property	Details
Experiments	29395067
Identification Methods	proximity labelling technology
Interaction Type	physical association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0003729 - mRNA binding GO:0005634 - nucleus GO:0005737 - cytoplasm GO:0005829 - cytosol
Homologous interactions	16

Homologous interactions

Color coding for hit scores

	1 133 Hs			1 824
+	Hs
		928040 RSMN_HUMAN (6-86): 1.43e-24: 95.8: 23.86		DDX20_HUMAN (1-824): 0: 727: 100.00
+	Hs
		912126 RUXG_HUMAN (4-79): 1.75e-25: 93.5: 30.26		DDX20_HUMAN (1-824): 0: 727: 100.00
+	Hs
		539175 RSMB_HUMAN (6-86): 1.43e-23: 93.1: 23.86		DDX20_HUMAN (1-824): 0: 727: 100.00
+	Hs
		68466 RUXGL_HUMAN (4-79): 1.11e-22: 86.2: 28.95		DDX20_HUMAN (1-824): 0: 727: 100.00
+	Hs
		167668 LSM1_HUMAN (1-133): 3.57e-53: 165: 100.00		DDX6_HUMAN (25-444): 7.61e-164: 486: 32.62
+	Dm
		612787 Q9W2K2_DROME (1-124): 3.53e-39: 130: 63.71		DDX6_DROME (46-444): 3.45e-163: 483: 33.50
+	Sc
		761974 LSM1_YEAST (4-123): 5.07e-34: 118: 40.98		DHH1_YEAST (37-450): 3.88e-165: 490: 35.73
+	Sc
		762002 LSM7_YEAST (8-81): 5.46e-21: 83.1: 29.27		DHH1_YEAST (37-450): 3.88e-165: 490: 35.73
+	Sc
		762005 LSM3_YEAST (4-87): 7.53e-21: 81.9: 23.60		DHH1_YEAST (37-450): 3.88e-165: 490: 35.73
+	Dm
		612712 Q9VJI7_DROME (8-87): 4.88e-23: 88.1: 26.74		DDX6_DROME (46-444): 3.45e-163: 483: 33.50
+	Hs
		539083 RSMB_HUMAN (6-86): 1.43e-23: 93.1: 23.86		DDX17_HUMAN (13-501): 5.11e-135: 420: 23.99
+	Hs
		539041 RSMB_HUMAN (6-86): 1.43e-23: 93.1: 23.86		DDX42_HUMAN (9-756): 3.7e-132: 418: 17.75
+	Hs
		538830 RSMB_HUMAN (6-86): 1.43e-23: 93.1: 23.86		DDX5_HUMAN (13-488): 1.13e-131: 407: 22.70
+	Hs
		538855 RSMB_HUMAN (6-86): 1.43e-23: 93.1: 23.86		IF4A3_HUMAN (38-444): 2.03e-124: 381: 32.84
+	Hs
		538951 RSMB_HUMAN (6-86): 1.43e-23: 93.1: 23.86		DX39B_HUMAN (64-440): 3.19e-67: 231: 36.05
+	Hs
		117088 RSMB_HUMAN (6-86): 1.43e-23: 93.1: 23.86		DX39A_HUMAN (64-440): 1.21e-66: 229: 35.43