Interactor 1: RPOD (P00579)
RNA polymerase sigma factor RpoD (Sigma-70)
Gene: RPOD
Interactor 2: RPOD (P00579)
RNA polymerase sigma factor RpoD (Sigma-70)
Gene: RPOD
Species: Escherichia coli K-12
Source: intact
Category: Small-scale
Confidence: High
| Method score | Annotation score | Interaction score |
|---|---|---|
| 0.61 | 1.00 | 0.785 |
The method score is based on:
The annotation score is based on:
| Property | Details |
|---|---|
| Interacting Pfam domains | Sigma70_ner~Sigma70_ner, Sigma70_ner~Sigma70_r1_2, Sigma70_ner~Sigma70_r2, Sigma70_r1_1~Sigma70_r1_2, Sigma70_r1_1~Sigma70_r2, Sigma70_r1_2~Sigma70_r2, Sigma70_r1_2~Sigma70_r3, Sigma70_r2~Sigma70_r2, Sigma70_r2~Sigma70_r3, Sigma70_r2~Sigma70_r4, Sigma70_r3~Sigma70_r4, Sigma70_r4~Sigma70_r4 |
| Common GO terms | GO:0000345 - cytosolic DNA-directed RNA polymerase complex GO:0003677 - DNA binding GO:0005829 - cytosol GO:0006352 - DNA-templated transcription initiation GO:0009408 - response to heat and 4 others more... |
| Homologous interactions | 8 |
Homologous interactions
Color coding for hit scores 
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Service provided by Combinatics, Japan
Last updated: 15 Jul 2024
