HitPredict

Interactor 1: RP41L (A2RVK7)
Exosome complex component RRP41-like (Protein SLOWER GROWTH) (Ribosomal RNA-processing protein 41-like)
Gene: RRP41L

Interactor 2: RRP41 (Q9SP08)
Exosome complex component RRP41 homolog (Ribosomal RNA-processing protein 41) (AtRRP41) (AtRrp41p)
Gene: RRP41

Species: Arabidopsis thaliana

Source: intact

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.54	1.00	0.737

Property	Details
Experiments	25144737, 18160042
Identification Methods	affinity chromatography technology, tandem affinity purification
Interaction Type	physical association, association

Property	Details
Interacting Pfam domains	RNase_PH~RNase_PH, RNase_PH~RNase_PH_C, RNase_PH_C~RNase_PH_C
Common GO terms	GO:0000178 - exosome (RNase complex) GO:0003723 - RNA binding GO:0005737 - cytoplasm GO:0006364 - rRNA processing
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 256 At			1 241
+	At
		1456925 RRP41_ARATH (31-255): 4.09e-78: 237: 27.39		RRP41_ARATH (1-241): 2.09e-88: 262: 100.00
+	Hs
		1446189 EXOS4_HUMAN (26-254): 5.73e-78: 237: 22.55		EXOS4_HUMAN (1-236): 1.32e-80: 243: 47.68
+	Sp
		206869 RRP41_SCHPO (23-254): 3.07e-70: 217: 22.36		RRP41_SCHPO (1-235): 7.36e-70: 215: 39.83
+	Hs
		1384031 EXOS4_HUMAN (26-254): 5.73e-78: 237: 22.55		EXOS8_HUMAN (1-234): 3.64e-59: 189: 19.85
+	At
		1441031 RRP41_ARATH (31-255): 4.09e-78: 237: 27.39		CER7L_ARATH (1-240): 6.1e-55: 180: 15.83
+	At
		1444334 RRP41_ARATH (31-255): 4.09e-78: 237: 27.39		CER7_ARATH (1-240): 8.32e-53: 178: 15.83
+	At
		1443596 RRP41_ARATH (31-255): 4.09e-78: 237: 27.39		EXOS5_ARATH (10-236): 4.66e-54: 175: 23.67
+	Ss
		1463039 RRP41_SACS2 (26-256): 2.05e-77: 236: 29.79		RRP42_SACS2 (4-228): 2e-52: 172: 17.58
+	Hs
		1137671 EXOS4_HUMAN (26-254): 5.73e-78: 237: 22.55		EXOS7_HUMAN (5-233): 7.27e-50: 166: 15.04
+	Hs
		1446190 EXOS4_HUMAN (26-254): 5.73e-78: 237: 22.55		EXOS5_HUMAN (2-234): 4.78e-50: 165: 25.11
+	Dm
		1345959 Q9VK19_DROME (25-250): 5.94e-72: 222: 24.24		Q8T4A9_DROME (1-237): 6.71e-51: 172: 19.49
+	Hs
		1209122 EXOS4_HUMAN (26-254): 5.73e-78: 237: 22.55		EXOS6_HUMAN (3-228): 7.86e-46: 155: 28.75
+	Dm
		1478994 Q9VK19_DROME (25-250): 5.94e-72: 222: 24.24		Q9VW53_DROME (14-234): 5.94e-49: 165: 23.97
+	Mt
		203443 RRP41_METTH (33-253): 7.93e-74: 226: 29.78		RRP42_METTH (4-228): 1.65e-47: 159: 21.57
+	Sp
		206873 RRP41_SCHPO (23-254): 3.07e-70: 217: 22.36		RRP45_SCHPO (5-238): 2.85e-49: 165: 13.06
+	Dm
		1475374 Q9VK19_DROME (25-250): 5.94e-72: 222: 24.24		Q9VGZ2_DROME (17-230): 8.93e-47: 156: 23.26
+	Dm
		1177485 Q9VK19_DROME (25-250): 5.94e-72: 222: 24.24		Q29QQ9_DROME (5-239): 2.14e-44: 152: 16.79
+	Dm
		1177459 Q8SYC8_DROME (25-250): 1.78e-71: 221: 24.24		Q29QQ9_DROME (5-239): 2.14e-44: 152: 16.79
+	Hs
		1137652 EXOS8_HUMAN (6-253): 2.14e-65: 206: 18.31		EXOS7_HUMAN (5-233): 7.27e-50: 166: 15.04
+	Sp
		206879 RRP41_SCHPO (23-254): 3.07e-70: 217: 22.36		MTR3_SCHPO (14-236): 1.85e-44: 151: 26.20