HitPredict

Interactor 1: PRP39 (P39682)
Pre-mRNA-processing factor 39
Gene: PRP39

Interactor 2: LSM3 (P57743)
U6 snRNA-associated Sm-like protein LSm3 (SmX4 protein)
Gene: LSM3

Species: Saccharomyces cerevisiae S288C

Source: intact

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.33	0.60	0.445

Property	Details
Experiments	16429126
Identification Methods	tandem affinity purification
Interaction Type	association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0000398 - mRNA splicing, via spliceosome GO:0005634 - nucleus GO:0005681 - spliceosomal complex
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 629 Sc			1 89
+	Sc
		763250 PRP39_YEAST (1-629): 0: 528: 100.00		SMD2_YEAST (4-76): 1.35e-20: 80.2: 30.67
+	Sc
		884838 CLF1_YEAST (18-529): 4.18e-65: 228: 11.39		LSM3_YEAST (1-89): 1.27e-28: 99.9: 100.00
+	Sc
		865990 CLF1_YEAST (18-529): 4.18e-65: 228: 11.39		LSM7_YEAST (2-83): 1.07e-20: 80.6: 30.23
+	Sc
		986609 CLF1_YEAST (18-529): 4.18e-65: 228: 11.39		SMD2_YEAST (4-76): 1.35e-20: 80.2: 30.67
+	Sc
		768263 CLF1_YEAST (18-529): 4.18e-65: 228: 11.39		LSM5_YEAST (4-83): 2.79e-19: 76.4: 24.69
+	Ce
		1088934 SART3_CAEEL (43-500): 4.26e-52: 194: 12.62		Q9U1W8_CAEEL (1-81): 1.51e-25: 92.6: 47.13
+	Sc
		977590 PRP42_YEAST (29-405): 3.05e-58: 206: 18.22		SMD2_YEAST (4-76): 1.35e-20: 80.2: 30.67
+	Ce
		1088923 SART3_CAEEL (43-500): 4.26e-52: 194: 12.62		Q23543_CAEEL (2-86): 1.37e-23: 87.6: 27.91
+	Ce
		954822 SART3_CAEEL (43-500): 4.26e-52: 194: 12.62		RSMB_CAEEL (11-84): 2.82e-22: 86: 30.00
+	Ce
		186305 SART3_CAEEL (43-500): 4.26e-52: 194: 12.62		O18694_CAEEL (4-85): 2e-22: 84.5: 21.95
+	Ce
		1088926 SART3_CAEEL (43-500): 4.26e-52: 194: 12.62		Q95XD4_CAEEL (6-89): 7.58e-21: 80.6: 27.38
+	Ce
		1088927 SART3_CAEEL (43-500): 4.26e-52: 194: 12.62		Q95XN6_CAEEL (2-78): 9.09e-21: 79.8: 27.27
+	Ce
		1088918 SART3_CAEEL (43-500): 4.26e-52: 194: 12.62		SMD2_CAEEL (4-77): 3.19e-20: 79.5: 28.92
+	Hs
		300110 PRP6_HUMAN (4-473): 6.83e-36: 146: 11.28		RSMN_HUMAN (10-86): 1.36e-24: 93.7: 26.51
+	Hs
		300046 PRP6_HUMAN (4-473): 6.83e-36: 146: 11.28		RSMB_HUMAN (10-86): 3.53e-24: 92.9: 26.51
+	Hs
		300284 PRP6_HUMAN (4-473): 6.83e-36: 146: 11.28		LSM7_HUMAN (2-85): 7.35e-25: 91: 30.59
+	Hs
		300101 PRP6_HUMAN (4-473): 6.83e-36: 146: 11.28		LSM3_HUMAN (1-81): 7.88e-25: 90.6: 40.23
+	Hs
		300102 PRP6_HUMAN (4-473): 6.83e-36: 146: 11.28		LSM6_HUMAN (2-81): 5.33e-21: 80.2: 28.75
+	Hs
		300103 PRP6_HUMAN (4-473): 6.83e-36: 146: 11.28		SMD2_HUMAN (4-76): 1.47e-20: 80.2: 28.05
+	Hs
		300100 PRP6_HUMAN (4-473): 6.83e-36: 146: 11.28		RUXG_HUMAN (8-81): 2.24e-20: 78.7: 27.03