HitPredict

Interactor 1: RUXE (P62304)
Small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E) (Sm-E) (SmE)
Gene: SNRPE

Interactor 2: SF3A3 (Q12874)
Splicing factor 3A subunit 3 (SF3a60) (Spliceosome-associated protein 61) (SAP 61)
Gene: SF3A3

Species: Homo sapiens

Source: intact

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.65	1.00	0.811

The method score is based on:

Property	Details
Experiments	28514442, 33961781
Identification Methods	affinity chromatography technology, anti tag coimmunoprecipitation
Interaction Type	physical association, association

The annotation score is based on:

Property	Details
Interacting Pfam domains	LSM~SDE2_2C, LSM~SF3A3
Common GO terms	GO:0000398 - mRNA splicing, via spliceosome GO:0003723 - RNA binding GO:0005634 - nucleus GO:0005654 - nucleoplasm GO:0005681 - spliceosomal complex and 5 others more... GO:0005684 - U2-type spliceosomal complex GO:0005686 - U2 snRNP GO:0071005 - U2-type precatalytic spliceosome GO:0071013 - catalytic step 2 spliceosome GO:1903241 - U2-type prespliceosome assembly
Homologous interactions	1

Homologous interactions

Color coding for hit scores

	1	92
Hs

1	501

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024