HitPredict

Interactor 1: RU17 (Q00916)
U1 small nuclear ribonucleoprotein 70 kDa homolog (U1 70K) (U1 snRNP 70 kDa homolog) (U1-70K) (U1 small nuclear ribonucleoprotein SNP1) (U1 snRNP protein SNP1)
Gene: SNP1

Interactor 2: SMD1 (Q02260)
Small nuclear ribonucleoprotein Sm D1 (Sm-D1) (snRNP core protein D1)
Gene: SMD1

Species: Saccharomyces cerevisiae S288C

Source: biogrid

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.68 1.00 0.827

The method score is based on:

Property Details
Experiments 29051543, 34349264, 37968396
Identification Methods affinity chromatography technology
Interaction Type physical association

The annotation score is based on:

Property Details
Interacting Pfam domains LSM~U1snRNP70_N
Common GO terms GO:0000243 - commitment complex
GO:0000395 - mRNA 5'-splice site recognition
GO:0000398 - mRNA splicing, via spliceosome
GO:0003729 - mRNA binding
GO:0005634 - nucleus
and 4 others

more...
Homologous interactions 2

Homologous interactions

Color coding for hit scores

1 300
Sc

1 146
+ Sp
+ Hs

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024