Protein: LDB1
LIM domain-binding protein 1 (LDB-1) (Carboxyl-terminal LIM domain-binding protein 2) (CLIM-2) (LIM domain-binding factor CLIM2) (hLdb1) (Nuclear LIM interactor)

Gene: LDB1
Organism: Homo sapiens
Interactions: 96
UniProt ID: Q86U70

Gene Ontology (top 5):
GO:0000122 - negative regulation of transcription by RNA polymerase II
GO:0000785 - chromatin
GO:0000972 - transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0001702 - gastrulation with mouth forming second
GO:0001942 - hair follicle development

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

638328

RBTN2
Rhombotin-2

9

20

Small-scale

0.974

High

1199149

LHX6
LIM/homeobox protein Lhx6

7

20

High-throughput

0.971

High

238112

LMX1B
LIM homeobox transcription factor 1-beta

8

20

Small-scale

0.971

High

903745

LMO4
LIM domain transcription factor LMO4

7

20

Small-scale

0.968

High

1199128

LHX4
LIM/homeobox protein Lhx4

7

20

High-throughput

0.965

High

1199126

LMO3
LIM domain only protein 3

5

20

High-throughput

0.927

High

1199143

LHX9
LIM/homeobox protein Lhx9

5

20

High-throughput

0.926

High

899923

ISL1
Insulin gene enhancer protein ISL-1

5

20

Small-scale

0.911

High

638528

RBTN1
Rhombotin-1

4

20

High-throughput

0.909

High

1148473

LHX8
LIM/homeobox protein Lhx8

4

20

High-throughput

0.909

High

839771

LHX2
LIM/homeobox protein Lhx2

4

20

High-throughput

0.904

High

1199146

LHX3
LIM/homeobox protein Lhx3

4

20

High-throughput

0.902

High

1199129

ISL2
Insulin gene enhancer protein ISL-2

4

20

High-throughput

0.894

High

822644

LHX1
LIM/homeobox protein Lhx1

3

20

High-throughput

0.858

High

1199136

SSBP3
Single-stranded DNA-binding protein 3

9

13

Small-scale

0.756

High

1199135

SSBP4
Single-stranded DNA-binding protein 4

7

13

High-throughput

0.748

High

946649

SSBP2
Single-stranded DNA-binding protein 2

6

13

Small-scale

0.738

High

568217

TAL1
T-cell acute lymphocytic leukemia protein 1

4

4

Small-scale

0.699

High

276195

PSD10
26S proteasome non-ATPase regulatory subunit 10

1

0

High-throughput

0.663

High

1199145

RNF12
E3 ubiquitin-protein ligase RLIM

3

4

Small-scale

0.631

High

1199150

TRI33
E3 ubiquitin-protein ligase TRIM33

2

0

Small-scale

0.585

High

253991

MTG16
Protein CBFA2T3

2

1

Small-scale

0.584

High

1199140

RNF38
E3 ubiquitin-protein ligase RNF38

2

4

Small-scale

0.584

High

1016730

CETN1
Centrin-1

2

2

High-throughput

0.574

High

227929

PRKN
E3 ubiquitin-protein ligase parkin

2

0

High-throughput

0.559

High

126467

FOXE1
Forkhead box protein E1

1

3

High-throughput

0.536

High

877785

FOXA1
Hepatocyte nuclear factor 3-alpha

1

3

High-throughput

0.536

High

1021129

FOXC1
Forkhead box protein C1

1

4

High-throughput

0.536

High

1199152

PYGO1
Pygopus homolog 1

1

3

High-throughput

0.536

High

234544

DSCAM
Cell adhesion molecule DSCAM

1

0

High-throughput

0.518

High

1199130

LCOR
Ligand-dependent corepressor

1

0

High-throughput

0.518

High

1199139

TOLIP
Toll-interacting protein

1

0

High-throughput

0.518

High

1199142

RPA2
DNA-directed RNA polymerase I subunit RPA2

1

0

High-throughput

0.518

High

1199148

LSM7
U6 snRNA-associated Sm-like protein LSm7

1

0

High-throughput

0.518

High

875862

MFAP4
Microfibril-associated glycoprotein 4

1

0

High-throughput

0.513

High

369919

ESR1
Estrogen receptor

1

1

Small-scale

0.501

High

435133

SP1
Transcription factor Sp1

1

1

Small-scale

0.501

High

1199123

LDB1
LIM domain-binding protein 1

1

1

Small-scale

0.501

High

791719

HD
Huntingtin

1

0

High-throughput

0.493

High

648538

CALL3
Calmodulin-like protein 3

1

2

High-throughput

0.489

High

868577

ATX1
Ataxin-1

1

0

High-throughput

0.486

High

637470

PSA1
Proteasome subunit alpha type-1

1

1

High-throughput

0.481

High

1199147

DNM3L
DNA

1

0

Small-scale

0.480

High

131729

BCL9
B-cell CLL/lymphoma 9 protein

1

1

High-throughput

0.479

High

171046

TBXT
T-box transcription factor T

1

1

High-throughput

0.479

High

197750

CRX
Cone-rod homeobox protein

1

20

High-throughput

0.479

High

211900

TLX3
T-cell leukemia homeobox protein 3

1

10

High-throughput

0.479

High

213351

TLX2
T-cell leukemia homeobox protein 2

1

4

High-throughput

0.479

High

225754

SOX15
Transcription factor SOX-15

1

4

High-throughput

0.479

High

487562

ANDR
Androgen receptor

1

1

High-throughput

0.479

High

507461

ERG
Transcriptional regulator ERG

1

1

High-throughput

0.479

High

551549

TFE2
Transcription factor E2-alpha

1

2

Small-scale

0.479

High

600178

TAF1
Transcription initiation factor TFIID subunit 1

1

2

Small-scale

0.479

High

620170

PAX7
Paired box protein Pax-7

1

15

High-throughput

0.479

High

620375

GATA2
Endothelial transcription factor GATA-2

1

3

High-throughput

0.479

High

641465

PAX6
Paired box protein Pax-6

1

4

High-throughput

0.479

High

656266

PSA5
Proteasome subunit alpha type-5

1

1

Small-scale

0.479

High

679130

TLX1
T-cell leukemia homeobox protein 1

1

7

High-throughput

0.479

High

727553

HNF1B
Hepatocyte nuclear factor 1-beta

1

7

High-throughput

0.479

High

727887

SOX6
Transcription factor SOX-6

1

5

High-throughput

0.479

High

818203

SOX2
Transcription factor SOX-2

1

5

High-throughput

0.479

High

878428

PAX9
Paired box protein Pax-9

1

3

High-throughput

0.479

High

881813

SOX10
Transcription factor SOX-10

1

5

High-throughput

0.479

High

882138

GSC
Homeobox protein goosecoid

1

4

High-throughput

0.479

High

905997

PP1A
Serine/threonine-protein phosphatase PP1-alpha catalytic subunit

1

1

High-throughput

0.479

High

927236

1433Z
14-3-3 protein zeta/delta

1

1

High-throughput

0.479

High

980801

TLE3
Transducin-like enhancer protein 3

1

1

High-throughput

0.479

High

988777

PAX8
Paired box protein Pax-8

1

7

High-throughput

0.479

High

998851

EP300
Histone acetyltransferase p300

1

1

High-throughput

0.479

High

1046706

KLF5
Krueppel-like factor 5

1

1

High-throughput

0.479

High

1085155

TBR1
T-box brain protein 1

1

1

High-throughput

0.479

High

1199124

BCL9L
B-cell CLL/lymphoma 9-like protein

1

1

High-throughput

0.479

High

1199127

SP7
Transcription factor Sp7

1

1

High-throughput

0.479

High

1199132

CIC
Protein capicua homolog

1

2

High-throughput

0.479

High

1199134

FEV
Protein FEV

1

1

High-throughput

0.479

High

1199141

SOX17
Transcription factor SOX-17

1

5

High-throughput

0.479

High

1199151

RNF6
E3 ubiquitin-protein ligase RNF6

1

4

Small-scale

0.479

High

1199154

IRAK3
Interleukin-1 receptor-associated kinase 3

1

0

High-throughput

0.460

High

135128

NFIB
Nuclear factor 1 B-type

1

0

High-throughput

0.458

High

318658

EYA4
Eyes absent homolog 4

1

0

High-throughput

0.458

High

414330

RB
Retinoblastoma-associated protein

1

0

Small-scale

0.458

High

505248

EGR2
E3 SUMO-protein ligase EGR2

1

0

High-throughput

0.458

High

553079

RFA2
Replication protein A 32 kDa subunit

1

0

High-throughput

0.458

High

720821

RFA3
Replication protein A 14 kDa subunit

1

0

High-throughput

0.458

High

986934

SUH
Recombining binding protein suppressor of hairless

1

0

High-throughput

0.458

High

1071048

IRF4
Interferon regulatory factor 4

1

0

High-throughput

0.458

High

1191123

I2BP2
Interferon regulatory factor 2-binding protein 2

1

0

Small-scale

0.458

High

1199125

DTX2
Probable E3 ubiquitin-protein ligase DTX2

1

0

High-throughput

0.458

High

1199138

BEX2
Protein BEX2

1

0

Small-scale

0.458

High

1199153

ORC6
Origin recognition complex subunit 6

1

0

High-throughput

0.458

High

1199133

NUDC1
NudC domain-containing protein 1

1

0

High-throughput

0.426

High

1199137

IDI2
Isopentenyl-diphosphate delta-isomerase 2

5

0

High-throughput

0.374

High

1199144

PICK1
PRKCA-binding protein

2

0

High-throughput

0.328

High

1199131

SYGP1
Ras/Rap GTPase-activating protein SynGAP

2

0

High-throughput

0.314

High

885693

NXPH1
Neurexophilin-1

1

0

High-throughput

0.279

Low


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Last updated: 15 Jul 2024