HitPredict

Interactor 1: NRPE1 (Q5D869)
DNA-directed RNA polymerase V subunit 1 (DNA-directed RNA polymerase D subunit 1b) (AtNRPD1b) (Nuclear RNA polymerase D 1b) (DNA-directed RNA polymerase E subunit 1) (Nuclear RNA polymerase E 1) (EC 2.7.7.6) (Protein DEFECTIVE IN MERISTEM SILENCING 5) (Protein DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 3) (Protein RNA-DIRECTED DNA METHYLATION DEFECTIVE 1) (RNA polymerase IV subunit 1) (POL IV 1)
Gene: NRPE1

Interactor 2: AGO4 (Q9ZVD5)
Protein argonaute 4 (AtAGO4) (Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 11)
Gene: AGO4

Species: Arabidopsis thaliana

Source: intact

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.80 0.60 0.694

The method score is based on:

Property Details
Experiments 19410546, 25561521, 17938239, 16839879
Identification Methods pull down, affinity chromatography technology, anti tag coimmunoprecipitation
Interaction Type direct interaction, physical association

The annotation score is based on:

Property Details
Interacting Pfam domains -
Common GO terms GO:0005730 - nucleolus
GO:0030422 - siRNA processing
GO:0035194 - regulatory ncRNA-mediated post-transcriptional gene silencing
Homologous interactions 12

Homologous interactions

Color coding for hit scores

1 1976
At

1 924
+ Hs
+ Hs
+ At
+ Hs
+ Mm
+ Hs
+ Hs
+ Hs
+ Hs
+ Dm
+ Sp
+ Dm

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Last updated: 15 Jul 2024