HitPredict

Interactor 1: PATL1 (Q86TB9)
Protein PAT1 homolog 1 (PAT1-like protein 1) (Protein PAT1 homolog b) (Pat1b) (hPat1b)
Gene: PATL1

Interactor 2: LSM4 (Q9Y4Z0)
U6 snRNA-associated Sm-like protein LSm4 (Glycine-rich protein) (GRP)
Gene: LSM4

Species: Homo sapiens

Source: intact

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.77	1.00	0.881

Property	Details
Experiments	27247266, 29395067, 33961781, 20584987
Identification Methods	affinity chromatography technology, proximity labelling technology, anti tag coimmunoprecipitation
Interaction Type	physical association, association

Property	Details
Interacting Pfam domains	LSM~PAT1
Common GO terms	GO:0000932 - P-body GO:0003723 - RNA binding GO:0005829 - cytosol GO:0033962 - P-body assembly
Homologous interactions	6

Homologous interactions

Color coding for hit scores

	1 770 Hs			1 139
+	Hs
		1198420 PATL1_HUMAN (1-770): 0: 606: 100.00		LSM2_HUMAN (1-94): 2.68e-36: 121: 28.42
+	Hs
		87377 PATL2_HUMAN (264-765): 1.91e-97: 314: 32.54		LSM4_HUMAN (1-139): 4.8e-47: 150: 100.00
+	Sc
		635852 PAT1_YEAST (178-765): 1.32e-74: 259: 16.38		LSM2_YEAST (1-88): 3.45e-32: 111: 28.09
+	Sc
		635868 PAT1_YEAST (178-765): 1.32e-74: 259: 16.38		LSM4_YEAST (1-98): 9.17e-25: 95.1: 36.11
+	Sp
		194953 PAT1_SCHPO (154-761): 6.3e-69: 243: 17.65		LSM2_SCHPO (1-87): 8.99e-30: 105: 25.00
+	Hs
		302278 SC31A_HUMAN (71-526): 5.04e-30: 129: 11.14		RUXF_HUMAN (3-70): 3.59e-27: 98.2: 33.82