HitPredict

Interactor 1: LSM7 (Q9SI54)
Sm-like protein LSM7 (AtLSM7) (Protein EMBRYO DEFECTIVE 2816) (U6 snRNA-associated Sm-like protein LSM7)
Gene: LSM7

Interactor 2: Q9ZV45 (Q9ZV45)
Small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E)
Gene: PCP

Species: Arabidopsis thaliana

Source: intact

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.48	1.00	0.698

Property	Details
Experiments	21798944
Identification Methods	two hybrid, two hybrid array
Interaction Type	direct interaction, physical association

Property	Details
Interacting Pfam domains	LSM~LSM
Common GO terms	GO:0003723 - RNA binding GO:0005681 - spliceosomal complex
Homologous interactions	15

Homologous interactions

Color coding for hit scores

	1 99 At			1 88
+	At
		1319289 LSM7_ARATH (1-99): 6.07e-37: 121: 100.00		Q8LAK5_ARATH (1-88): 1.28e-44: 140: 97.73
+	Hs
		973844 LSM7_HUMAN (4-97): 1.13e-33: 113: 55.32		RUXE_HUMAN (5-85): 1.83e-41: 132: 67.90
+	Dm
		1478476 Q9VJI7_DROME (4-96): 9.41e-30: 103: 58.51		RUXE_DROME (5-85): 6.14e-41: 131: 67.90
+	Hs
		973687 RSMN_HUMAN (3-92): 1.17e-25: 97.2: 25.00		RUXE_HUMAN (5-85): 1.83e-41: 132: 67.90
+	Hs
		574200 RSMB_HUMAN (3-92): 2.67e-25: 96.1: 25.00		RUXE_HUMAN (5-85): 1.83e-41: 132: 67.90
+	Dm
		1052578 RSMB_DROME (10-81): 2.52e-23: 89.9: 24.32		RUXE_DROME (5-85): 6.14e-41: 131: 67.90
+	Hs
		973679 RUXG_HUMAN (3-86): 3.61e-24: 88.8: 34.52		RUXE_HUMAN (5-85): 1.83e-41: 132: 67.90
+	Dm
		1481280 RUXG_DROME (3-86): 1.95e-23: 86.8: 33.33		RUXE_DROME (5-85): 6.14e-41: 131: 67.90
+	Hs
		71565 RUXGL_HUMAN (3-86): 1.77e-22: 84.5: 33.33		RUXE_HUMAN (5-85): 1.83e-41: 132: 67.90
+	Hs
		344524 LSM8_HUMAN (11-90): 6.69e-22: 83.7: 33.75		RUXE_HUMAN (5-85): 1.83e-41: 132: 67.90
+	Hs
		178008 LSM1_HUMAN (7-95): 5.96e-21: 82.2: 29.21		RUXE_HUMAN (5-85): 1.83e-41: 132: 67.90
+	Hs
		973680 LSM3_HUMAN (6-83): 3.14e-20: 79.5: 30.95		RUXE_HUMAN (5-85): 1.83e-41: 132: 67.90
+	Ce
		1445016 RUXG_CAEEL (3-86): 1.17e-21: 82.2: 34.52		RUXE_CAEEL (1-86): 2.32e-40: 129: 56.98
+	Sc
		945362 LSM3_YEAST (6-90): 1.9e-22: 84.9: 34.88		RUXE_YEAST (3-86): 6.95e-34: 113: 52.17
+	Sc
		820852 RUXG_YEAST (7-86): 2.09e-21: 81.6: 34.57		RUXE_YEAST (3-86): 6.95e-34: 113: 52.17