HitPredict

Interactor 1: MSI3 (O22469)
WD-40 repeat-containing protein MSI3
Gene: MSI3

Interactor 2: DDB1B (O49552)
DNA damage-binding protein 1b (UV-damaged DNA-binding protein 1b) (DDB1b)
Gene: DDB1B

Species: Arabidopsis thaliana

Source: biogrid

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.38	0.80	0.553

Property	Details
Experiments	18223036
Identification Methods	affinity chromatography technology
Interaction Type	physical association

Property	Details
Interacting Pfam domains	MMS1_N~WD40, CPSF_A~WD40
Common GO terms	-
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 424 At			1 1088
+	At
		198952 MSI4_ARATH (24-312): 1.4e-38: 147: 14.41		DDB1B_ARATH (1-1088): 0: 1316: 100.00
+	At
		198967 MSI4_ARATH (24-312): 1.4e-38: 147: 14.41		DDB1A_ARATH (1-1088): 0: 1312: 91.27
+	At
		1444136 HTD1_ARATH (167-395): 1.71e-37: 143: 17.41		DDB1A_ARATH (1-1088): 0: 1312: 91.27
+	At
		198899 MSI3_ARATH (1-199): 1.01e-36: 140: 10.00		DDB1A_ARATH (1-1088): 0: 1312: 91.27
+	Hs
		1157912 TBL1R_HUMAN (100-423): 3.96e-65: 218: 17.80		DDB1_HUMAN (3-1088): 0: 1202: 51.13
+	At
		198892 MSI1_ARATH (260-419): 5.05e-22: 99.4: 19.77		DDB1A_ARATH (1-1088): 0: 1312: 91.27
+	At
		235864 COP1_ARATH (144-335): 6.51e-13: 72.4: 24.48		DDB1B_ARATH (1-1088): 0: 1316: 100.00
+	Hs
		1157890 GRWD1_HUMAN (250-422): 3.93e-26: 111: 16.48		DDB1_HUMAN (3-1088): 0: 1202: 51.13
+	Hs
		1157733 RBBP7_HUMAN (1-158): 1.93e-21: 97.5: 11.48		DDB1_HUMAN (3-1088): 0: 1202: 51.13
+	Hs
		1066320 RBBP4_HUMAN (260-419): 1.83e-20: 94.8: 22.67		DDB1_HUMAN (3-1088): 0: 1202: 51.13
+	Hs
		1085662 TBL3_HUMAN (229-423): 1.07e-18: 90.6: 17.77		DDB1_HUMAN (3-1088): 0: 1202: 51.13
+	Hs
		1157860 SNR40_HUMAN (291-422): 4.69e-19: 89.8: 21.43		DDB1_HUMAN (3-1088): 0: 1202: 51.13
+	Hs
		284949 TAF5L_HUMAN (41-280): 3.8e-45: 166: 15.95		SF3B3_HUMAN (3-1085): 0: 1013: 21.29
+	Hs
		1148022 GRWD1_HUMAN (250-422): 3.93e-26: 111: 16.48		SF3B3_HUMAN (3-1085): 0: 1013: 21.29
+	Hs
		1148066 NLE1_HUMAN (355-424): 1.47e-13: 74: 12.86		SF3B3_HUMAN (3-1085): 0: 1013: 21.29
+	Ce
		233653 LIN53_CAEEL (260-419): 5.11e-23: 102: 23.81		O44985_CAEEL (3-1085): 0: 951: 20.45
+	Sp
		151712 CKN1_SCHPO (185-394): 1.07e-14: 77.4: 27.06		DDB1_SCHPO (6-1088): 0: 809: 26.25
+	Hs
		1083364 TAF5_HUMAN (173-423): 2.99e-47: 175: 14.13		CPSF1_HUMAN (3-519): 7.5e-118: 398: 17.30
+	Hs
		1083446 NLE1_HUMAN (355-424): 1.47e-13: 74: 12.86		CPSF1_HUMAN (3-519): 7.5e-118: 398: 17.30
+	Ce
		1018719 LIN53_CAEEL (260-419): 5.11e-23: 102: 23.81		CPSF1_CAEEL (622-1087): 4.12e-102: 353: 18.99