HitPredict - High confidence protein-protein interactions

Download interactions: TXT MITAB-2.5

Interaction	Interactor	Experiments	Homologs	Category	Interaction Score	Confidence
340745	CPSF4 Cleavage and polyadenylation specificity factor subunit 4	4	4	High-throughput	0.895	High
1083434	WDR33 pre-mRNA 3' end processing protein WDR33	4	18	Small-scale	0.860	High
775041	FUS RNA-binding protein FUS	2	7	Small-scale	0.789	High
1083370	CPSF6 Cleavage and polyadenylation specificity factor subunit 6	2	5	High-throughput	0.789	High
1083345	CSTF3 Cleavage stimulation factor subunit 3	2	5	Small-scale	0.768	High
1083423	RBM14 RNA-binding protein 14	2	0	Small-scale	0.748	High
1083439	STPAP Speckle targeted PIP5K1A-regulated poly(A) polymerase	1	1	Small-scale	0.715	High
1083389	FIP1 Pre-mRNA 3'-end-processing factor FIP1	4	2	Small-scale	0.698	High
1083433	GLIS2 Zinc finger protein GLIS2	1	3	Small-scale	0.698	High
1083455	CPSF3 Cleavage and polyadenylation specificity factor subunit 3	4	8	Small-scale	0.694	High
478015	SNRPA U1 small nuclear ribonucleoprotein A	1	8	High-throughput	0.691	High
889560	CLK2 Dual specificity protein kinase CLK2	1	4	High-throughput	0.691	High
1083353	CUL3 Cullin-3	1	18	High-throughput	0.691	High
1083410	DYRK2 Dual specificity tyrosine-phosphorylation-regulated kinase 2	1	7	High-throughput	0.691	High
1083462	CILK1 Serine/threonine-protein kinase ICK	1	1	High-throughput	0.691	High
371877	MYC Myc proto-oncogene protein	4	5	Small-scale	0.676	High
1083413	SYMPK Symplekin	3	2	High-throughput	0.656	High
1083364	TAF5 Transcription initiation factor TFIID subunit 5	1	12	Small-scale	0.647	High
1083442	ANLN Anillin	3	2	High-throughput	0.640	High
1083449	CPSF2 Cleavage and polyadenylation specificity factor subunit 2	3	8	Small-scale	0.640	High
269448	KI21B Kinesin-like protein KIF21B	1	1	High-throughput	0.618	High
908975	NEK4 Serine/threonine-protein kinase Nek4	1	7	High-throughput	0.618	High
209255	PRP4 U4/U6 small nuclear ribonucleoprotein Prp4	1	12	High-throughput	0.618	High
285237	EED Polycomb protein EED	1	17	High-throughput	0.618	High
349054	LATS1 Serine/threonine-protein kinase LATS1	1	4	High-throughput	0.618	High
400725	RAF1 RAF proto-oncogene serine/threonine-protein kinase	1	3	High-throughput	0.618	High
472683	RU17 U1 small nuclear ribonucleoprotein 70 kDa	1	7	High-throughput	0.618	High
675478	TYY1 Transcriptional repressor protein YY1	1	5	High-throughput	0.618	High
750411	CSTF2 Cleavage stimulation factor subunit 2	1	5	Small-scale	0.618	High
889091	RBM25 RNA-binding protein 25	1	3	High-throughput	0.618	High
897769	CDK9 Cyclin-dependent kinase 9	1	4	High-throughput	0.618	High
909544	ROA3 Heterogeneous nuclear ribonucleoprotein A3	1	2	Small-scale	0.618	High
988096	TRA2B Transformer-2 protein homolog beta	1	4	High-throughput	0.618	High
1083347	TADBP TAR DNA-binding protein 43	1	4	High-throughput	0.618	High
1083348	IKZF1 DNA-binding protein Ikaros	1	5	High-throughput	0.618	High
1083351	PRP4K Serine/threonine-protein kinase PRP4 homolog	1	9	High-throughput	0.618	High
1083354	CUL4A Cullin-4A	1	18	Small-scale	0.618	High
1083377	ZN362 Zinc finger protein 362	1	4	High-throughput	0.618	High
1083402	CPSF7 Cleavage and polyadenylation specificity factor subunit 7	1	2	High-throughput	0.618	High
1083407	SP7 Transcription factor Sp7	1	4	High-throughput	0.618	High
1083409	PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4	1	2	High-throughput	0.618	High
1083414	RBP56 TATA-binding protein-associated factor 2N	1	7	Small-scale	0.618	High
1083424	PP1RA Serine/threonine-protein phosphatase 1 regulatory subunit 10	1	3	High-throughput	0.618	High
1083445	SALL1 Sal-like protein 1	1	3	High-throughput	0.618	High
1083446	NLE1 Notchless protein homolog 1	1	9	High-throughput	0.618	High
1083457	IKZF3 Zinc finger protein Aiolos	1	6	High-throughput	0.618	High
1083458	ZBT21 Zinc finger and BTB domain-containing protein 21	1	2	High-throughput	0.618	High
1083463	ZN148 Zinc finger protein 148	1	3	High-throughput	0.618	High
1083447	WWOX WW domain-containing oxidoreductase	2	1	High-throughput	0.608	High
667282	RPB1 DNA-directed RNA polymerase II subunit RPB1	2	3	Small-scale	0.602	High
1083367	ELAV1 ELAV-like protein 1	1	0	Small-scale	0.586	High
899744	PAPOA Poly(A) polymerase alpha	2	4	Small-scale	0.585	High
588554	RFA2 Replication protein A 32 kDa subunit	2	2	High-throughput	0.584	High
695309	RFA1 Replication protein A 70 kDa DNA-binding subunit	2	2	High-throughput	0.584	High
768050	RFA3 Replication protein A 14 kDa subunit	2	2	High-throughput	0.584	High
1083371	HIF1A Hypoxia-inducible factor 1-alpha	2	7	Small-scale	0.584	High
1083395	RBBP6 E3 ubiquitin-protein ligase RBBP6	2	3	Small-scale	0.584	High
1081357	INCA1 Protein INCA1	2	0	High-throughput	0.580	High
1083360	RHG19 Rho GTPase-activating protein 19	2	7	High-throughput	0.571	High
1083387	RHGBA Rho GTPase-activating protein 11A	2	5	High-throughput	0.571	High
157292	CTRO Citron Rho-interacting kinase	1	5	High-throughput	0.553	High
1083359	CUL7 Cullin-7	1	2	High-throughput	0.553	High
1048839	REL Proto-oncogene c-Rel	1	0	High-throughput	0.549	High
251575	CCNT1 Cyclin-T1	1	4	High-throughput	0.536	High
446951	NPM Nucleophosmin	1	2	Small-scale	0.536	High
480112	RU1C U1 small nuclear ribonucleoprotein C	1	1	High-throughput	0.536	High
541974	TOP1 DNA topoisomerase 1	1	2	High-throughput	0.536	High
574236	RSMB Small nuclear ribonucleoprotein-associated proteins B and B'	1	3	High-throughput	0.536	High
1065156	SSRP1 FACT complex subunit SSRP1	1	4	High-throughput	0.536	High
1083352	SNW1 SNW domain-containing protein 1	1	3	High-throughput	0.536	High
1083393	CSN6 COP9 signalosome complex subunit 6	1	1	High-throughput	0.536	High
1083441	SSU72 RNA polymerase II subunit A C-terminal domain phosphatase SSU72	1	2	High-throughput	0.536	High
1083450	HDAC6 Protein deacetylase HDAC6	1	11	High-throughput	0.536	High
345720	STAU1 Double-stranded RNA-binding protein Staufen homolog 1	2	4	High-throughput	0.533	High
1083397	ZCH18 Zinc finger CCCH domain-containing protein 18	2	6	High-throughput	0.533	High
1083374	RHG29 Rho GTPase-activating protein 29	2	5	High-throughput	0.521	High
1083368	EZH2 Histone-lysine N-methyltransferase EZH2	1	8	High-throughput	0.515	High
1083384	CDC73 Parafibromin	1	0	Small-scale	0.513	High
1083400	HSC20 Iron-sulfur cluster co-chaperone protein HscB	1	0	High-throughput	0.513	High
875639	PRC2A Protein PRRC2A	1	3	Small-scale	0.508	High
507884	UBC Polyubiquitin-C [Cleaved into: Ubiquitin]	1	2	High-throughput	0.501	High
861586	NEDD4 E3 ubiquitin-protein ligase NEDD4	1	5	High-throughput	0.501	High
1083369	TAF12 Transcription initiation factor TFIID subunit 12	1	1	Small-scale	0.501	High
1083432	CPEB1 Cytoplasmic polyadenylation element-binding protein 1	1	2	High-throughput	0.500	High
1005737	RPP38 Ribonuclease P protein subunit p38	1	0	High-throughput	0.493	High
1083406	ARRD2 Arrestin domain-containing protein 2	1	2	High-throughput	0.489	High
1083418	ARRD3 Arrestin domain-containing protein 3	1	2	High-throughput	0.489	High
1083431	SHAN3 SH3 and multiple ankyrin repeat domains protein 3	1	2	High-throughput	0.489	High
1083365	TAF7 Transcription initiation factor TFIID subunit 7	1	0	Small-scale	0.480	High
129016	MEN1 Menin	1	1	High-throughput	0.479	High
131993	WWP2 NEDD4-like E3 ubiquitin-protein ligase WWP2	1	5	High-throughput	0.479	High
218115	TGON2 Trans-Golgi network integral membrane protein 2	1	2	High-throughput	0.479	High
241517	PRKN E3 ubiquitin-protein ligase parkin	1	5	High-throughput	0.479	High
247860	NUPR1 Nuclear protein 1	1	1	High-throughput	0.479	High
256845	H2B1K Histone H2B type 1-K	1	5	High-throughput	0.479	High
259859	BRD4 Bromodomain-containing protein 4	1	9	High-throughput	0.479	High
278322	NCOR1 Nuclear receptor corepressor 1	1	4	High-throughput	0.479	High
280595	PR40A Pre-mRNA-processing factor 40 homolog A	1	12	High-throughput	0.479	High
286452	WBP4 WW domain-binding protein 4	1	7	High-throughput	0.479	High
319713	UFL1 E3 UFM1-protein ligase 1	1	2	High-throughput	0.479	High
321838	PCF11 Pre-mRNA cleavage complex 2 protein Pcf11	1	2	High-throughput	0.479	High
325809	UBR5 E3 ubiquitin-protein ligase UBR5	1	8	High-throughput	0.479	High
330909	KI20A Kinesin-like protein KIF20A	1	11	High-throughput	0.479	High
406111	MYCN N-myc proto-oncogene protein	1	6	High-throughput	0.479	High
519494	MYBB Myb-related protein B	1	3	High-throughput	0.479	High
519987	ANDR Androgen receptor	1	5	High-throughput	0.479	High
537054	HSP7C Heat shock cognate 71 kDa protein	1	2	High-throughput	0.479	High
814798	CUX1 Homeobox protein cut-like 1	1	1	High-throughput	0.479	High
830631	CCNF Cyclin-F	1	2	High-throughput	0.479	High
904647	MECP2 Methyl-CpG-binding protein 2	1	4	High-throughput	0.479	High
958626	CSN2 COP9 signalosome complex subunit 2	1	4	Small-scale	0.479	High
970408	UBE2H Ubiquitin-conjugating enzyme E2 H	1	3	High-throughput	0.479	High
979560	H4 Histone H4	1	4	High-throughput	0.479	High
980725	H2B1C Histone H2B type 1-C/E/F/G/I	1	5	High-throughput	0.479	High
1024531	VIGLN Vigilin	1	4	High-throughput	0.479	High
1026341	HSF1 Heat shock factor protein 1	1	2	High-throughput	0.479	High
1035570	KIF23 Kinesin-like protein KIF23	1	8	High-throughput	0.479	High
1067230	EP300 Histone acetyltransferase p300	1	10	High-throughput	0.479	High
1083346	CSN1 COP9 signalosome complex subunit 1	1	4	Small-scale	0.479	High
1083349	FKBP5 Peptidyl-prolyl cis-trans isomerase FKBP5	1	3	High-throughput	0.479	High
1083350	BIRC3 Baculoviral IAP repeat-containing protein 3	1	2	High-throughput	0.479	High
1083355	WRN Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN	1	5	High-throughput	0.479	High
1083356	TRIPC E3 ubiquitin-protein ligase TRIP12	1	8	High-throughput	0.479	High
1083361	TNIP1 TNFAIP3-interacting protein 1	1	7	High-throughput	0.479	High
1083362	KIF14 Kinesin-like protein KIF14	1	4	High-throughput	0.479	High
1083366	NCOA2 Nuclear receptor coactivator 2	1	7	High-throughput	0.479	High
1083379	BRE1A E3 ubiquitin-protein ligase BRE1A	1	4	High-throughput	0.479	High
1083381	TSH3 Teashirt homolog 3	1	2	High-throughput	0.479	High
1083383	VIR Protein virilizer homolog	1	2	High-throughput	0.479	High
1083388	ZC3HE Zinc finger CCCH domain-containing protein 14	1	2	High-throughput	0.479	High
1083392	HAKAI E3 ubiquitin-protein ligase Hakai	1	1	High-throughput	0.479	High
1083394	PARPT Protein mono-ADP-ribosyltransferase TIPARP	1	1	High-throughput	0.479	High
1083396	SLN11 Schlafen family member 11	1	2	Small-scale	0.479	High
1083398	DDX42 ATP-dependent RNA helicase DDX42	1	2	High-throughput	0.479	High
1083399	SIAH1 E3 ubiquitin-protein ligase SIAH1	1	1	Small-scale	0.479	High
1083401	SRRM1 Serine/arginine repetitive matrix protein 1	1	3	High-throughput	0.479	High
1083403	FBX22 F-box only protein 22	1	1	High-throughput	0.479	High
1083404	ARI1B AT-rich interactive domain-containing protein 1B	1	2	High-throughput	0.479	High
1083408	DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific	1	1	High-throughput	0.479	High
1083411	ESR2 Estrogen receptor beta	1	5	High-throughput	0.479	High
1083412	KAT6A Histone acetyltransferase KAT6A	1	2	High-throughput	0.479	High
1083415	CSN5 COP9 signalosome complex subunit 5	1	3	Small-scale	0.479	High
1083417	FUBP1 Far upstream element-binding protein 1	1	4	High-throughput	0.479	High
1083420	ZBT10 Zinc finger and BTB domain-containing protein 10	1	4	High-throughput	0.479	High
1083422	CI072 Guanine nucleotide exchange factor C9orf72	1	2	High-throughput	0.479	High
1083426	WRIP1 ATPase WRNIP1	1	1	High-throughput	0.479	High
1083427	ANM1 Protein arginine N-methyltransferase 1	1	3	High-throughput	0.479	High
1083428	HNRL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1	1	1	Small-scale	0.479	High
1083430	FACD2 Fanconi anemia group D2 protein	1	5	High-throughput	0.479	High
1083435	NSRP1 Nuclear speckle splicing regulatory protein 1	1	1	High-throughput	0.479	High
1083437	SMRCD SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1	1	9	High-throughput	0.479	High
1083443	SIR7 NAD-dependent protein deacetylase sirtuin-7	1	5	High-throughput	0.479	High
1083451	ZRAN1 Ubiquitin thioesterase ZRANB1	1	3	High-throughput	0.479	High
1083452	TCF20 Transcription factor 20	1	1	High-throughput	0.479	High
1083456	GPTC8 G patch domain-containing protein 8	1	1	High-throughput	0.479	High
1083459	YETS2 YEATS domain-containing protein 2	1	3	High-throughput	0.479	High
1083460	FZR1 Fizzy-related protein homolog	1	13	High-throughput	0.479	High
1083461	MYO6 Unconventional myosin-VI	1	1	High-throughput	0.479	High
1083464	NUDC Nuclear migration protein nudC	1	4	High-throughput	0.479	High
1083419	DDT4L DNA damage-inducible transcript 4-like protein	1	1	High-throughput	0.470	High
215087	PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3	1	0	High-throughput	0.458	High
424396	HMGN1 Non-histone chromosomal protein HMG-14	1	0	High-throughput	0.458	High
445538	IF4E Eukaryotic translation initiation factor 4E	1	0	Small-scale	0.458	High
628766	TBP TATA-box-binding protein	1	0	Small-scale	0.458	High
883227	UB2R1 Ubiquitin-conjugating enzyme E2 R1	1	0	High-throughput	0.458	High
1004329	NOP14 Nucleolar protein 14	1	0	High-throughput	0.458	High
1083344	ILF2 Interleukin enhancer-binding factor 2	1	0	Small-scale	0.458	High
1083378	BEND3 BEN domain-containing protein 3	1	0	High-throughput	0.458	High
1083386	MED27 Mediator of RNA polymerase II transcription subunit 27	1	0	High-throughput	0.458	High
1083405	TNIP2 TNFAIP3-interacting protein 2	1	0	High-throughput	0.458	High
1083416	FBX32 F-box only protein 32	1	0	High-throughput	0.458	High
1083444	RAD18 E3 ubiquitin-protein ligase RAD18	1	0	High-throughput	0.458	High
1083453	DACH1 Dachshund homolog 1	1	0	High-throughput	0.458	High
765447	BMI1 Polycomb complex protein BMI-1	1	5	High-throughput	0.445	High
1083358	CASP8 Caspase-8	1	2	High-throughput	0.445	High
1083363	PCBP2 Poly(rC)-binding protein 2	1	4	Small-scale	0.445	High
1083375	NCBP3 Nuclear cap-binding protein subunit 3	1	1	High-throughput	0.445	High
1083440	LN28A Protein lin-28 homolog A	1	2	High-throughput	0.445	High
1083454	DDX41 Probable ATP-dependent RNA helicase DDX41	1	3	High-throughput	0.445	High
272117	OBSL1 Obscurin-like protein 1	1	2	High-throughput	0.437	High
276120	NIPS2 Protein NipSnap homolog 2	1	1	Small-scale	0.437	High
293627	CD123 Translation initiation factor eIF2 assembly protein	1	2	High-throughput	0.437	High
411819	NTRK1 High affinity nerve growth factor receptor	1	2	High-throughput	0.437	High
995556	ACTC Actin, alpha cardiac muscle 1	1	1	High-throughput	0.437	High
1083372	QSER1 Glutamine and serine-rich protein 1	1	4	High-throughput	0.437	High
1083380	RN123 E3 ubiquitin-protein ligase RNF123	1	1	High-throughput	0.437	High
1083391	TRI67 Tripartite motif-containing protein 67	1	6	High-throughput	0.437	High
1083429	LGR4 Leucine-rich repeat-containing G-protein coupled receptor 4	1	1	High-throughput	0.437	High
1083438	PKHA4 Pleckstrin homology domain-containing family A member 4	1	6	High-throughput	0.437	High
1083425	NUDC1 NudC domain-containing protein 1	1	0	High-throughput	0.426	High
327971	GBRAP Gamma-aminobutyric acid receptor-associated protein	1	5	High-throughput	0.407	High
1083390	NBEL2 Neurobeachin-like protein 2	1	11	High-throughput	0.407	High
1083421	C170L Cep170-like protein	1	1	High-throughput	0.407	High
1083465	CSAG2 Chondrosarcoma-associated gene 2/3 protein	1	4	High-throughput	0.407	High
571421	GLU2B Glucosidase 2 subunit beta	1	0	High-throughput	0.249	Low
903890	BAP31 B-cell receptor-associated protein 31	1	0	High-throughput	0.249	Low
1083357	GSE1 Genetic suppressor element 1	1	0	High-throughput	0.249	Low
1083373	CL16A Protein CLEC16A	1	0	High-throughput	0.249	Low
1083376	FA76B Protein FAM76B	1	0	High-throughput	0.249	Low
1083385	CH082 UPF0598 protein C8orf82	1	0	High-throughput	0.249	Low
1083436	ATG5 Autophagy protein 5	1	0	High-throughput	0.249	Low
1083448	KCMF1 E3 ubiquitin-protein ligase KCMF1	1	0	High-throughput	0.249	Low
1083382	CP135 Centrosomal protein of 135 kDa	1	0	High-throughput	0.232	Low