HitPredict

Interactor 1: CSPC (P0A9Y6)
Cold shock-like protein CspC (CSP-C)
Gene: CSPC

Interactor 2: RHLE (P25888)
ATP-dependent RNA helicase RhlE (EC 3.6.4.13)
Gene: RHLE

Species: Escherichia coli K-12

Source: intact

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.57	0.60	0.588

Property	Details
Experiments	19402753, 15690043
Identification Methods	tandem affinity purification, pull down
Interaction Type	physical association, association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0003723 - RNA binding GO:0005829 - cytosol
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 69 Ec			1 454
+	Hs
		563028 YBOX3_HUMAN (3-68): 5.04e-27: 101: 44.29		IF4A3_HUMAN (2-373): 1.41e-161: 463: 35.39
+	Hs
		757556 YBOX1_HUMAN (3-68): 1.38e-26: 100: 44.29		IF4A3_HUMAN (2-373): 1.41e-161: 463: 35.39
+	Hs
		757660 LN28B_HUMAN (3-68): 4.87e-26: 96.9: 41.10		IF4A3_HUMAN (2-373): 1.41e-161: 463: 35.39
+	Hs
		1328085 LN28A_HUMAN (6-68): 2.88e-24: 91.5: 40.00		DDX47_HUMAN (2-448): 1.33e-137: 404: 30.58
+	Ec
		465431 CSPA_ECOLI (2-69): 2.5e-30: 102: 69.12		RHLE_ECOLI (1-442): 2.14e-132: 391: 100.00
+	Hs
		931311 YBOX1_HUMAN (3-68): 1.38e-26: 100: 44.29		DDX17_HUMAN (2-440): 7.36e-127: 386: 31.83
+	Hs
		571395 YBOX1_HUMAN (3-68): 1.38e-26: 100: 44.29		DDX5_HUMAN (1-450): 1.08e-127: 384: 29.89
+	Hs
		78151 YBOX1_HUMAN (3-68): 1.38e-26: 100: 44.29		B5BUE6_HUMAN (1-450): 1.95e-127: 384: 29.89
+	Hs
		1271664 LN28A_HUMAN (6-68): 2.88e-24: 91.5: 40.00		DDX17_HUMAN (2-440): 7.36e-127: 386: 31.83
+	Hs
		571600 LN28A_HUMAN (6-68): 2.88e-24: 91.5: 40.00		DDX5_HUMAN (1-450): 1.08e-127: 384: 29.89
+	Hs
		133971 YBOX1_HUMAN (3-68): 1.38e-26: 100: 44.29		DDX3X_HUMAN (2-381): 1.72e-123: 375: 39.30
+	Hs
		134211 LN28A_HUMAN (6-68): 2.88e-24: 91.5: 40.00		DDX3X_HUMAN (2-381): 1.72e-123: 375: 39.30
+	Ce
		248035 O62213_CAEEL (3-68): 5.91e-27: 98.5: 42.86		Q9XUW5_CAEEL (3-432): 1.27e-121: 367: 33.41
+	Ce
		106462 G5EDV3_CAEEL (3-68): 3.53e-22: 87.7: 39.19		Q9XUW5_CAEEL (3-432): 1.27e-121: 367: 33.41
+	Ec
		465120 CSPC_ECOLI (1-69): 5.06e-32: 106: 100.00		DEAD_ECOLI (2-377): 1.26e-84: 273: 41.11
+	Ec
		464324 CSPE_ECOLI (1-69): 1.75e-31: 105: 82.61		DEAD_ECOLI (2-377): 1.26e-84: 273: 41.11
+	Ce
		248030 O62213_CAEEL (3-68): 5.91e-27: 98.5: 42.86		Q9N3F4_CAEEL (3-369): 6.41e-86: 277: 42.08
+	Ec
		465119 CSPA_ECOLI (2-69): 2.5e-30: 102: 69.12		DEAD_ECOLI (2-377): 1.26e-84: 273: 41.11
+	Ce
		106457 G5EDV3_CAEEL (3-68): 3.53e-22: 87.7: 39.19		Q9N3F4_CAEEL (3-369): 6.41e-86: 277: 42.08
+	Ec
		464297 CSPD_ECOLI (5-63): 1.13e-25: 91.1: 54.24		DEAD_ECOLI (2-377): 1.26e-84: 273: 41.11