HitPredict

Interactor 1: RBM47 (A0AV96)
RNA-binding protein 47 (RNA-binding motif protein 47)
Gene: RBM47

Interactor 2: RENT1 (Q92900)
Regulator of nonsense transcripts 1 (EC 3.6.4.12) (EC 3.6.4.13) (ATP-dependent helicase RENT1) (Nonsense mRNA reducing factor 1) (NORF1) (Up-frameshift suppressor 1 homolog) (hUpf1)
Gene: UPF1

Species: Homo sapiens

Source: intact

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.62	0.60	0.611

Property	Details
Experiments	29395067, 33961781
Identification Methods	proximity labelling technology, affinity chromatography technology, anti tag coimmunoprecipitation
Interaction Type	physical association, association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0003723 - RNA binding GO:0005634 - nucleus GO:0005737 - cytoplasm
Homologous interactions	10

Homologous interactions

Color coding for hit scores

	1 593 Hs			1 1129
+	Hs
		516622 PABP1_HUMAN (2-505): 1.93e-67: 232: 14.86		RENT1_HUMAN (1-1129): 0: 1604: 100.00
+	Hs
		235988 HNRPQ_HUMAN (3-477): 2.08e-20: 97.4: 13.59		RENT1_HUMAN (1-1129): 0: 1604: 100.00
+	Hs
		202236 HNRPR_HUMAN (1-244): 5.85e-19: 92.8: 13.51		RENT1_HUMAN (1-1129): 0: 1604: 100.00
+	Sc
		376676 PABP_YEAST (73-422): 1.12e-63: 221: 20.40		RENT1_YEAST (60-947): 0: 1085: 53.54
+	Hs
		47870 RBM47_HUMAN (1-593): 1.32e-116: 360: 100.00		MOV10_HUMAN (324-950): 2.67e-157: 496: 23.12
+	Hs
		47752 RBM47_HUMAN (1-593): 1.32e-116: 360: 100.00		HELZ_HUMAN (286-1087): 7.41e-121: 413: 18.92
+	Sc
		376894 PABP_YEAST (73-422): 1.12e-63: 221: 20.40		SEN1_YEAST (286-929): 7.8e-159: 523: 25.46
+	Hs
		1031468 PABP4_HUMAN (2-520): 4.08e-71: 243: 13.85		MOV10_HUMAN (324-950): 2.67e-157: 496: 23.12
+	Hs
		516699 PABP1_HUMAN (2-505): 1.93e-67: 232: 14.86		MOV10_HUMAN (324-950): 2.67e-157: 496: 23.12
+	Hs
		236082 HNRPQ_HUMAN (3-477): 2.08e-20: 97.4: 13.59		MOV10_HUMAN (324-950): 2.67e-157: 496: 23.12