HitPredict

Interactor 1: RS40 (P92965)
Serine/arginine-rich splicing factor RS40 (At-RSp40) (AtRS40)
Gene: RS40

Interactor 2: U1135 (Q8VY74)
U11/U12 small nuclear ribonucleoprotein 35 kDa protein (U11/U12 snRNP 35 kDa protein) (U11/U12-35K)
Gene: SNRNP35

Species: Arabidopsis thaliana

Source: intact

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.46	1.00	0.681

Property	Details
Experiments	15987817
Identification Methods	pull down
Interaction Type	direct interaction, physical association

Property	Details
Interacting Pfam domains	RRM_1~RRM_1
Common GO terms	GO:0000398 - mRNA splicing, via spliceosome GO:0016607 - nuclear speck
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 350 At			1 333
+	At
		955327 SRS31_ARATH (1-267): 1.49e-50: 171: 49.25		U1135_ARATH (1-333): 5.74e-49: 168: 100.00
+	At
		955323 SRS31_ARATH (1-267): 1.49e-50: 171: 49.25		RU17_ARATH (48-333): 2.69e-46: 164: 26.89
+	At
		955331 RS40_ARATH (1-350): 7.38e-59: 195: 100.00		CYP59_ARATH (58-325): 2.29e-36: 138: 20.15
+	Hs
		516674 RBM4_HUMAN (1-344): 4.07e-52: 178: 17.45		PABP1_HUMAN (55-262): 5.52e-34: 133: 15.87
+	Hs
		442455 RBM4_HUMAN (1-344): 4.07e-52: 178: 17.45		RU17_HUMAN (48-275): 2.54e-34: 132: 28.14
+	At
		955324 SRS31_ARATH (1-267): 1.49e-50: 171: 49.25		CYP59_ARATH (58-325): 2.29e-36: 138: 20.15
+	Hs
		680422 TIA1_HUMAN (4-257): 4.48e-36: 136: 13.26		TIA1_HUMAN (59-277): 9.78e-40: 145: 14.93
+	Mm
		665745 TIA1_MOUSE (4-256): 1.06e-36: 138: 15.05		PABP1_MOUSE (55-262): 7.33e-34: 133: 15.87
+	Hs
		441896 TIA1_HUMAN (4-257): 4.48e-36: 136: 13.26		RU17_HUMAN (48-275): 2.54e-34: 132: 28.14
+	Hs
		516495 PABP4_HUMAN (1-177): 1.58e-30: 124: 18.85		PABP1_HUMAN (55-262): 5.52e-34: 133: 15.87
+	Hs
		442125 PABP4_HUMAN (1-177): 1.58e-30: 124: 18.85		RU17_HUMAN (48-275): 2.54e-34: 132: 28.14
+	Hs
		680439 TIA1_HUMAN (4-257): 4.48e-36: 136: 13.26		TIAR_HUMAN (2-188): 1.61e-28: 115: 13.27
+	Hs
		516339 PABP1_HUMAN (1-179): 3.23e-28: 117: 18.14		PABP1_HUMAN (55-262): 5.52e-34: 133: 15.87
+	Hs
		441852 PABP1_HUMAN (1-179): 3.23e-28: 117: 18.14		RU17_HUMAN (48-275): 2.54e-34: 132: 28.14
+	Hs
		1054543 RBM4B_HUMAN (1-345): 2.2e-52: 178: 18.82		RBM39_HUMAN (20-256): 6.33e-12: 68.3: 15.18
+	Hs
		1054557 RBM4_HUMAN (1-344): 4.07e-52: 178: 17.45		RBM39_HUMAN (20-256): 6.33e-12: 68.3: 15.18
+	Hs
		1020249 PABP4_HUMAN (1-177): 1.58e-30: 124: 18.85		ELAV2_HUMAN (1-146): 2e-29: 117: 11.62
+	Hs
		474021 PABP4_HUMAN (1-177): 1.58e-30: 124: 18.85		PAB4L_HUMAN (63-259): 2.25e-22: 98.3: 17.09
+	Mm
		857334 TIA1_MOUSE (4-256): 1.06e-36: 138: 15.05		RU17_MOUSE (49-183): 2.22e-15: 78.6: 44.93
+	Hs
		1031328 PABP4_HUMAN (1-177): 1.58e-30: 124: 18.85		RBM39_HUMAN (20-256): 6.33e-12: 68.3: 15.18