Protein: SQD
RNA-binding protein squid (Heterogeneous nuclear ribonucleoprotein 40) (HNRNP 40)

Gene: SQD
Organism: Drosophila melanogaster
Interactions: 70
UniProt ID: Q08473

Gene Ontology (top 5):
GO:0000184 - nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000381 - regulation of alternative mRNA splicing, via spliceosome
GO:0000398 - mRNA splicing, via spliceosome
GO:0000785 - chromatin
GO:0003723 - RNA binding

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

822824

RB27C
Heterogeneous nuclear ribonucleoprotein 27C

4

18

Small-scale

0.891

High

822848

RB87F
Heterogeneous nuclear ribonucleoprotein 87F

3

18

Small-scale

0.827

High

995804

Q9W1I0
TAR DNA-binding protein-43 homolog, isoform A

2

20

Small-scale

0.768

High

112939

M9NF14
IGF-II mRNA-binding protein, isoform L

2

20

Small-scale

0.754

High

432490

ROA1
Heterogeneous nuclear ribonucleoprotein A1

2

17

Small-scale

0.754

High

114952

M9PE01
Ecdysone-induced protein 63E, isoform N

1

4

High-throughput

0.625

High

597051

PABP
Polyadenylate-binding protein

1

18

Small-scale

0.618

High

995759

DSOR1
Dual specificity mitogen-activated protein kinase kinase dSOR1

1

12

High-throughput

0.618

High

995767

AKT1
RAC serine/threonine-protein kinase

1

12

High-throughput

0.618

High

995770

Q8SYC0
Bruno 1, isoform D

1

20

Small-scale

0.618

High

995771

Q94533
Ribosomal protein S6 kinase

1

13

High-throughput

0.618

High

995793

Q9VR61
Ribosomal protein S6 kinase II, isoform A

1

13

High-throughput

0.618

High

995803

PDPK1
3-phosphoinositide-dependent protein kinase 1

1

9

High-throughput

0.618

High

995789

Q9VMW2
Reticulon-like protein

2

1

High-throughput

0.584

High

995797

ORB2
Translational regulator orb2

2

18

Small-scale

0.584

High

995761

U2AF2
Splicing factor U2AF 50 kDa subunit

1

20

High-throughput

0.575

High

995769

SHEP
Protein alan shepard

1

20

High-throughput

0.575

High

995788

Q9VMV9
Reticulon-like protein

2

1

High-throughput

0.552

High

995779

Q9VD23
Pyruvate kinase

1

1

High-throughput

0.508

High

995782

Q9VGW7
Arginine methyltransferase 1

1

13

Small-scale

0.501

High

995783

CARM1
Probable histone-arginine methyltransferase CARMER

1

15

Small-scale

0.501

High

137654

O02374
Bruno

1

20

High-throughput

0.492

High

995786

Q9VLS7
LD21067p

1

2

High-throughput

0.484

High

113891

M9PAY7
Pi3K21B, isoform C

1

16

High-throughput

0.479

High

114610

M9PD17
Gigas, isoform B

1

1

High-throughput

0.479

High

527239

K10
DNA-binding protein K10

1

1

Small-scale

0.479

High

612602

DDX6
ATP-dependent RNA helicase me31b

1

13

High-throughput

0.479

High

728989

PARP
Poly [ADP-ribose] polymerase

1

11

Small-scale

0.479

High

995772

FOXO
Forkhead box protein O

1

6

High-throughput

0.479

High

995777

Q9VCC9
LD23779p

1

10

High-throughput

0.479

High

995787

CUP
Protein cup

1

1

Small-scale

0.479

High

995792

Q9VP20
RING-type E3 ubiquitin transferase

1

10

Small-scale

0.479

High

995794

Q9VRV8
FI21453p1

1

5

Small-scale

0.479

High

65878

MBD56
Methyl-CpG-binding domain protein 5/6 homolog sba

1

0

High-throughput

0.458

High

780571

PEP
Zinc finger protein on ecdysone puffs

1

0

Small-scale

0.458

High

995760

RBF
Retinoblastoma family protein

1

0

Small-scale

0.458

High

995775

ATLAS
Atlastin

1

0

Small-scale

0.458

High

995806

4EBP
Eukaryotic translation initiation factor 4E-binding protein

1

0

High-throughput

0.458

High

995790

Q9VN44
FI07923p

1

10

High-throughput

0.457

High

94827

F3YDN6
RE08495p

1

1

High-throughput

0.445

High

995764

Q7KHL0
Bancal protein

1

20

High-throughput

0.445

High

995776

ANKHM
Ankyrin repeat and KH domain-containing protein mask

1

1

High-throughput

0.445

High

995784

PIWI
Protein piwi

1

16

High-throughput

0.445

High

995785

Q9VLB7
Rab GDP dissociation inhibitor

1

1

High-throughput

0.445

High

995798

PYRG
CTP synthase

1

1

High-throughput

0.445

High

995800

FRIZ2
Frizzled-2

1

1

High-throughput

0.445

High

995802

Q9VYK0
Smrter, isoform D

1

1

High-throughput

0.445

High

995805

Q9W255
GH05812p

1

12

High-throughput

0.445

High

995807

FL2D
Pre-mRNA-splicing regulator female-lethal(2)D

1

1

High-throughput

0.445

High

995808

X2JCC3
CCR4-NOT transcription complex subunit 7

1

2

High-throughput

0.445

High

995763

Q32KE1
RE04201p

1

12

High-throughput

0.442

High

382209

EGFR
Epidermal growth factor receptor

1

7

High-throughput

0.437

High

817622

GAP1
GTPase-activating protein

1

6

High-throughput

0.437

High

995765

Q7KNQ9
Connector enhancer of KSR protein CNK

1

17

High-throughput

0.437

High

995781

Q9VEV3
LP07287p

1

10

High-throughput

0.437

High

995791

RHEB
GTP-binding protein Rheb homolog

1

2

High-throughput

0.437

High

567387

CATA
Catalase

1

0

High-throughput

0.426

High

995766

GAR1
Probable H/ACA ribonucleoprotein complex subunit 1

1

0

High-throughput

0.426

High

995768

Q8IQX8
histidine--tRNA ligase

1

0

High-throughput

0.426

High

995773

Q962S2
60S ribosomal protein L41

1

0

High-throughput

0.426

High

995780

Q9VEA1
Eukaryotic translation initiation factor 4C

1

0

High-throughput

0.426

High

995758

ATPB2
Sodium/potassium-transporting ATPase subunit beta-2

1

1

High-throughput

0.407

High

995762

Q2PDT4
Transforming growth factor beta-1-induced transcript 1 protein

1

2

High-throughput

0.407

High

995778

Q9VCS4
MIP11264p

1

0

High-throughput

0.265

Low

995799

MED19
Mediator of RNA polymerase II transcription subunit 19

1

0

High-throughput

0.265

Low

995801

Q9VWJ6
FI03615p

1

0

High-throughput

0.249

Low

995774

Q9V9P0
Uncharacterized protein, isoform B

1

0

High-throughput

0.238

Low

344035

PUR2
Trifunctional purine biosynthetic protein adenosine-3 [Includes: Phosphoribosylamine--glycine ligase

1

0

High-throughput

0.232

Low

995795

VPS8
Vacuolar protein sorting-associated protein 8 homolog

1

0

Small-scale

0.232

Low

995796

Q9VSK4
Adipose-secreted signaling protein

1

0

High-throughput

0.232

Low


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Last updated: 15 Jul 2024