Protein: RIX1
Pre-rRNA-processing protein RIX1 (Involved in processing IST2 protein 2) (Ribosomal export protein 1)

Gene: RIX1
Organism: Saccharomyces cerevisiae S288C
Interactions: 167
UniProt ID: P38883

Gene Ontology (top 5):
GO:0000027 - ribosomal large subunit assembly
GO:0003682 - chromatin binding
GO:0005634 - nucleus
GO:0005654 - nucleoplasm
GO:0005829 - cytosol

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

756850

IPI3
Pre-rRNA-processing protein IPI3

14

1

Small-scale

0.761

High

756824

NUG1
Nuclear GTP-binding protein NUG1

13

1

Small-scale

0.756

High

756849

NOG2
Nucleolar GTP-binding protein 2

11

1

Small-scale

0.753

High

756859

NOG1
Nucleolar GTP-binding protein 1

16

0

Small-scale

0.729

High

755227

IPI1
Pre-rRNA-processing protein IPI1

14

0

Small-scale

0.728

High

703050

MRT4
Ribosome assembly factor MRT4

6

1

Small-scale

0.726

High

630863

NLE1
Ribosome assembly protein 4

12

0

Small-scale

0.725

High

756847

PESC
Pescadillo homolog

13

0

Small-scale

0.725

High

756862

ARX1
Probable metalloprotease ARX1

11

0

Small-scale

0.723

High

534988

RL3
Large ribosomal subunit protein uL3

10

0

Small-scale

0.722

High

756885

MDN1
Midasin

9

0

Small-scale

0.721

High

756893

IF6
Eukaryotic translation initiation factor 6

9

0

Small-scale

0.721

High

756825

NSA2
Ribosome biogenesis protein NSA2

10

0

Small-scale

0.720

High

756877

BUD20
Bud site selection protein 20

8

0

Small-scale

0.719

High

756848

SDA1
Protein SDA1

8

0

Small-scale

0.715

High

638748

SPB4
ATP-dependent rRNA helicase SPB4

5

1

Small-scale

0.709

High

756887

NOP53
Ribosome biogenesis protein NOP53

6

0

Small-scale

0.688

High

756875

NOC3
Nucleolar complex-associated protein 3

4

1

Small-scale

0.686

High

756851

NOP15
Ribosome biogenesis protein 15

5

0

Small-scale

0.686

High

756839

ALB1
Ribosome biogenesis protein ALB1

5

0

Small-scale

0.684

High

733822

RPF2
Ribosome biogenesis protein RPF2

5

0

Small-scale

0.679

High

756861

HAS1
ATP-dependent RNA helicase HAS1

4

1

Small-scale

0.676

High

640944

RL5
Large ribosomal subunit protein uL18

5

0

Small-scale

0.676

High

482870

RL35A
Large ribosomal subunit protein uL29A

5

0

Small-scale

0.672

High

756876

RLP24
Ribosome biogenesis protein RLP24

7

2

Small-scale

0.671

High

756867

ERB1
Ribosome biogenesis protein ERB1

3

1

Small-scale

0.640

High

498924

RL4A
Large ribosomal subunit protein uL4A

3

1

Small-scale

0.633

High

405617

RL26A
Large ribosomal subunit protein uL24A

2

1

Small-scale

0.611

High

756871

ATG17
Autophagy-related protein 17

2

0

High-throughput

0.594

High

383141

RL25
Large ribosomal subunit protein uL23

2

0

Small-scale

0.585

High

756884

NIP7
60S ribosome subunit biogenesis protein NIP7

2

0

High-throughput

0.585

High

491193

HSP71
Heat shock protein SSA1

2

2

High-throughput

0.584

High

634408

SPB1
27S pre-rRNA

2

1

Small-scale

0.584

High

645029

RL16A
Large ribosomal subunit protein uL13A

2

1

Small-scale

0.584

High

756891

MAK21
Ribosome biogenesis protein MAK21

2

2

Small-scale

0.584

High

511281

SSB1
Ribosome-associated molecular chaperone SSB1

2

2

High-throughput

0.571

High

742789

GBLP
Small ribosomal subunit protein RACK1

2

1

High-throughput

0.571

High

407042

RS3
Small ribosomal subunit protein uS3

2

0

High-throughput

0.559

High

472187

RL31A
Large ribosomal subunit protein eL31A

2

0

Small-scale

0.559

High

564287

RL8A
Large ribosomal subunit protein eL8A

2

0

Small-scale

0.559

High

698160

AFG2
ATPase family gene 2 protein

2

0

High-throughput

0.559

High

756833

NOP2
25S rRNA

2

0

Small-scale

0.559

High

756844

CGR1
rRNA-processing protein CGR1

2

0

Small-scale

0.559

High

756866

PUF6
Pumilio homology domain family member 6

2

0

Small-scale

0.547

High

756868

RRP5
rRNA biogenesis protein RRP5

2

0

Small-scale

0.547

High

707270

RT05
Small ribosomal subunit protein uS5m

2

1

High-throughput

0.537

High

756879

BRX1
Ribosome biogenesis protein BRX1

1

1

High-throughput

0.536

High

756855

NOP3
Serine/arginine

1

1

Small-scale

0.515

High

355891

H2B2
Histone H2B.2

1

0

High-throughput

0.513

High

655612

RPAC2
DNA-directed RNA polymerases I and III subunit RPAC2

1

0

High-throughput

0.513

High

743258

RL32
Large ribosomal subunit protein eL32

1

0

Small-scale

0.513

High

756344

NMD3
60S ribosomal export protein NMD3

1

0

Small-scale

0.513

High

756834

RL10
Large ribosomal subunit protein uL16

1

0

Small-scale

0.513

High

756830

MSL1
U2 small nuclear ribonucleoprotein B''

1

0

High-throughput

0.486

High

389280

HXKA
Hexokinase-1

1

0

High-throughput

0.479

High

454318

TBA1
Tubulin alpha-1 chain

1

0

High-throughput

0.479

High

588071

HSP60
Heat shock protein 60, mitochondrial

1

0

High-throughput

0.479

High

756852

ALDH6
Magnesium-activated aldehyde dehydrogenase, cytosolic

1

0

High-throughput

0.479

High

382746

RL24A
Large ribosomal subunit protein eL24A

1

2

Small-scale

0.479

High

399462

RLA0
Large ribosomal subunit protein uL10

1

1

High-throughput

0.479

High

481157

RL1A
Large ribosomal subunit protein uL1A

1

1

High-throughput

0.479

High

621469

RL24B
Large ribosomal subunit protein eL24B

1

2

Small-scale

0.479

High

631874

RS2
Small ribosomal subunit protein uS5

1

1

High-throughput

0.479

High

645207

RL16B
Large ribosomal subunit protein uL13B

1

1

High-throughput

0.479

High

650289

SPT5
Transcription elongation factor SPT5

1

1

High-throughput

0.479

High

742014

NOP4
Nucleolar protein 4

1

1

Small-scale

0.479

High

756872

NOC4
Nucleolar complex protein 4

1

2

High-throughput

0.479

High

756886

YTM1
Ribosome biogenesis protein YTM1

1

1

Small-scale

0.479

High

141326

RS9A
Small ribosomal subunit protein uS4A

1

0

High-throughput

0.458

High

358062

RS17A
Small ribosomal subunit protein eS17A

1

0

High-throughput

0.458

High

376784

PABP
Polyadenylate-binding protein, cytoplasmic and nuclear

1

0

High-throughput

0.458

High

404838

RL9A
Large ribosomal subunit protein uL6A

1

0

Small-scale

0.458

High

405188

RL17A
Large ribosomal subunit protein uL22A

1

0

Small-scale

0.458

High

407913

RS13
Small ribosomal subunit protein uS15

1

0

High-throughput

0.458

High

408356

RS31
Ubiquitin-ribosomal protein eS31 fusion protein [Cleaved into: Ubiquitin; Small ribosomal subunit protein eS31

1

0

High-throughput

0.458

High

413501

RS14A
Small ribosomal subunit protein uS11A

1

0

High-throughput

0.458

High

425947

RS19A
Small ribosomal subunit protein eS19A

1

0

High-throughput

0.458

High

471052

RS22A
Small ribosomal subunit protein uS8A

1

0

High-throughput

0.458

High

471398

RL11A
Large ribosomal subunit protein uL5A

1

0

Small-scale

0.458

High

471777

RL27A
Large ribosomal subunit protein eL27A

1

0

Small-scale

0.458

High

478895

RL20B
Large ribosomal subunit protein eL20B

1

0

Small-scale

0.458

High

479109

RL43B
Large ribosomal subunit protein eL43B

1

0

Small-scale

0.458

High

480099

RS6A
Small ribosomal subunit protein eS6A

1

0

High-throughput

0.458

High

480667

RS8A
Small ribosomal subunit protein eS8A

1

0

High-throughput

0.458

High

481024

RL23B
Large ribosomal subunit protein uL14B

1

0

Small-scale

0.458

High

481335

RL2A
Large ribosomal subunit protein uL2A

1

0

Small-scale

0.458

High

481638

RL18B
Large ribosomal subunit protein eL18B

1

0

Small-scale

0.458

High

481916

RL12B
Large ribosomal subunit protein uL11B

1

0

Small-scale

0.458

High

482259

RS18A
Small ribosomal subunit protein uS13A

1

0

High-throughput

0.458

High

543714

HSC82
ATP-dependent molecular chaperone HSC82

1

0

High-throughput

0.458

High

558049

RPB3
DNA-directed RNA polymerase II subunit RPB3

1

0

High-throughput

0.458

High

606640

RPC2
DNA-directed RNA polymerase III subunit RPC2

1

0

High-throughput

0.458

High

627615

NAP1
Nucleosome assembly protein

1

0

High-throughput

0.458

High

628037

SIS1
Protein SIS1

1

0

High-throughput

0.458

High

634599

KRR1
KRR1 small subunit processome component

1

0

High-throughput

0.458

High

645439

RS7A
Small ribosomal subunit protein eS7A

1

0

High-throughput

0.458

High

662196

TF2B
Transcription initiation factor IIB

1

0

High-throughput

0.458

High

688237

RPC3
DNA-directed RNA polymerase III subunit RPC3

1

0

High-throughput

0.458

High

700401

RSSA1
Small ribosomal subunit protein uS2A

1

0

High-throughput

0.458

High

706268

RS3A1
Small ribosomal subunit protein eS1A

1

0

High-throughput

0.458

High

729909

RS27A
Small ribosomal subunit protein eS27A

1

0

High-throughput

0.458

High

731809

EBP2
rRNA-processing protein EBP2

1

0

Small-scale

0.458

High

732717

RL14A
Large ribosomal subunit protein eL14A

1

0

Small-scale

0.458

High

733657

LAS1
Protein LAS1

1

0

Small-scale

0.458

High

745651

NU170
Nucleoporin NUP170

1

0

High-throughput

0.458

High

746238

YBC8
UPF0642 protein YBL028C

1

0

High-throughput

0.458

High

748606

ENP1
Essential nuclear protein 1

1

0

High-throughput

0.458

High

752448

RS20
Small ribosomal subunit protein uS10

1

0

High-throughput

0.458

High

756821

LAA1
AP-1 accessory protein LAA1

1

0

High-throughput

0.458

High

756823

NOC2
Nucleolar complex protein 2

1

0

Small-scale

0.458

High

756829

BMT5
25S rRNA

1

0

High-throughput

0.458

High

756840

MTR4
ATP-dependent RNA helicase DOB1

1

0

Small-scale

0.458

High

756841

RS12
Small ribosomal subunit protein eS12

1

0

High-throughput

0.458

High

756843

NSA1
Ribosome biogenesis protein NSA1

1

0

High-throughput

0.458

High

756853

H3
Histone H3

1

0

High-throughput

0.458

High

756856

RS15
Small ribosomal subunit protein uS19

1

0

High-throughput

0.458

High

756858

RL6A
Large ribosomal subunit protein eL6A

1

0

Small-scale

0.458

High

756860

TOM1
E3 ubiquitin-protein ligase TOM1

1

0

High-throughput

0.458

High

756864

MTQ2
eRF1 methyltransferase catalytic subunit MTQ2

1

0

High-throughput

0.458

High

756865

RRP17
Ribosomal RNA-processing protein 17

1

0

High-throughput

0.458

High

756870

FKBP4
FK506-binding protein 4

1

0

Small-scale

0.458

High

756880

SGO1
Shugoshin

1

0

High-throughput

0.458

High

756881

TMA16
Translation machinery-associated protein 16

1

0

High-throughput

0.458

High

756882

RS10A
Small ribosomal subunit protein eS10A

1

0

High-throughput

0.458

High

756883

RRS1
Regulator of ribosome biosynthesis

1

0

High-throughput

0.458

High

756888

YL11B
Transposon Ty1-LR1 Gag-Pol polyprotein

1

0

High-throughput

0.458

High

756890

SCC1
Sister chromatid cohesion protein 1

1

0

High-throughput

0.458

High

493942

HSP72
Heat shock protein SSA2

1

2

High-throughput

0.445

High

605346

HSP74
Heat shock protein SSA4

1

2

High-throughput

0.445

High

694682

HSP7F
Heat shock protein homolog SSE1

1

2

High-throughput

0.445

High

756826

SSB2
Ribosome-associated molecular chaperone SSB2

1

2

High-throughput

0.445

High

756827

RL13B
Large ribosomal subunit protein eL13B

1

1

Small-scale

0.445

High

756842

RL4B
Large ribosomal subunit protein uL4B

1

1

Small-scale

0.445

High

756845

RL26B
Large ribosomal subunit protein uL24B

1

1

Small-scale

0.445

High

756894

RL13A
Large ribosomal subunit protein eL13A

1

1

Small-scale

0.445

High

756835

GLDS1
Protein GDS1

1

0

High-throughput

0.438

High

756837

ZNF1
Respiratory transcription factor ZNF1

1

0

High-throughput

0.438

High

756857

UBC7
Ubiquitin-conjugating enzyme E2 7

1

0

High-throughput

0.438

High

756873

RXT3
Transcriptional regulatory protein RXT3

1

0

High-throughput

0.438

High

756889

MED2
Mediator of RNA polymerase II transcription subunit 2

1

0

High-throughput

0.438

High

756892

MED4
Mediator of RNA polymerase II transcription subunit 4

1

0

High-throughput

0.438

High

581363

MED14
Mediator of RNA polymerase II transcription subunit 14

1

0

High-throughput

0.426

High

693110

CDC5
Cell cycle serine/threonine-protein kinase CDC5/MSD2

1

0

High-throughput

0.426

High

697604

HBS1
Elongation factor 1 alpha-like protein

1

0

High-throughput

0.426

High

701297

VPS17
Vacuolar protein sorting-associated protein 17

1

0

High-throughput

0.426

High

756828

YIR7
Y' element ATP-dependent helicase YIL177C

1

1

High-throughput

0.407

High

756832

YJW5
Y' element ATP-dependent helicase YJL225C

1

1

High-throughput

0.407

High

754116

CIC1
Proteasome-interacting protein CIC1

6

0

Small-scale

0.380

High

756831

RLP7
Ribosome biogenesis protein RLP7

5

0

Small-scale

0.368

High

634021

BUD3
Bud site selection protein 3

1

0

High-throughput

0.279

Low

743803

ATPG
ATP synthase subunit gamma, mitochondrial

1

0

High-throughput

0.279

Low

756863

YD131
F-box protein YDR131C

1

0

High-throughput

0.279

Low

575957

ADT2
ADP,ATP carrier protein 2

1

0

High-throughput

0.261

Low

340136

KPYK1
Pyruvate kinase 1

1

0

High-throughput

0.249

Low

756822

IMDH1
Putative inosine-5'-monophosphate dehydrogenase 1

1

0

High-throughput

0.249

Low

756854

NUM1
Nuclear migration protein NUM1

1

0

High-throughput

0.249

Low

756874

VAM6
Vacuolar morphogenesis protein 6

1

0

High-throughput

0.249

Low

756878

NOP12
Nucleolar protein 12

1

0

Small-scale

0.249

Low

756846

BUD9
Bud site selection protein 9

1

0

High-throughput

0.238

Low

756869

ECI1
3,2-trans-enoyl-CoA isomerase

1

0

High-throughput

0.238

Low

562232

PFKA1
ATP-dependent 6-phosphofructokinase subunit alpha

1

0

High-throughput

0.232

Low

579975

IRA1
Inhibitory regulator protein IRA1

1

0

High-throughput

0.232

Low

699549

BEM3
GTPase-activating protein BEM3

1

0

High-throughput

0.232

Low

705164

HSP78
Heat shock protein 78, mitochondrial

1

0

High-throughput

0.232

Low

746981

EIF3A
Eukaryotic translation initiation factor 3 subunit A

1

0

High-throughput

0.232

Low

756836

AGP3
General amino acid permease AGP3

1

0

High-throughput

0.232

Low

756838

PFD1
Prefoldin subunit 1

1

0

High-throughput

0.232

Low


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Last updated: 15 Jul 2024