HitPredict

Interactor 1: SMD3 (Q17348)
Small nuclear ribonucleoprotein Sm D3 (Sm-D3) (snRNP core protein D3)
Gene: snr-1

Interactor 2: SART3 (Q17430)
Nuclear RNA-binding protein sart-3 (U4/U6 snRNA-associated-splicing factor)
Gene: sart-3

Species: Caenorhabditis elegans

Source: biogrid

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.38	0.80	0.553

Property	Details
Experiments	25753661
Identification Methods	affinity chromatography technology
Interaction Type	physical association

Property	Details
Interacting Pfam domains	LSM~Lsm_interact
Common GO terms	-
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 136 Ce			1 836
+	Ce
		1088921 LSM4_CAEEL (4-80): 4.93e-32: 111: 25.64		SART3_CAEEL (1-836): 4.59e-171: 517: 100.00
+	Ce
		1013433 SMD1_CAEEL (8-92): 1.47e-29: 105: 27.06		SART3_CAEEL (1-836): 4.59e-171: 517: 100.00
+	Hs
		1063317 LSM4_HUMAN (6-91): 6.14e-35: 119: 27.59		SART3_HUMAN (21-835): 3.76e-145: 454: 23.84
+	Hs
		912638 SMD3_HUMAN (3-115): 8.34e-34: 116: 59.29		SART3_HUMAN (21-835): 3.76e-145: 454: 23.84
+	Hs
		1063313 LSM2_HUMAN (9-96): 2.49e-32: 111: 22.22		SART3_HUMAN (21-835): 3.76e-145: 454: 23.84
+	Sc
		763234 SMD3_YEAST (1-101): 2.43e-33: 114: 44.55		PRP39_YEAST (5-499): 4.21e-63: 226: 13.93
+	Dm
		1369701 Q9VKW8_DROME (6-126): 1.04e-35: 122: 26.19		RNP4F_DROME (40-836): 1.05e-57: 215: 14.17
+	Hs
		1054708 LSM4_HUMAN (6-91): 6.14e-35: 119: 27.59		RBM39_HUMAN (573-818): 1.26e-56: 205: 22.05
+	Hs
		912633 SMD3_HUMAN (3-115): 8.34e-34: 116: 59.29		RBM39_HUMAN (573-818): 1.26e-56: 205: 22.05
+	Hs
		912293 SMD1_HUMAN (8-100): 1.54e-32: 112: 25.81		RBM39_HUMAN (573-818): 1.26e-56: 205: 22.05
+	Hs
		1054694 LSM2_HUMAN (9-96): 2.49e-32: 111: 22.22		RBM39_HUMAN (573-818): 1.26e-56: 205: 22.05
+	Hs
		1318167 LSM2_HUMAN (9-96): 2.49e-32: 111: 22.22		CRNL1_HUMAN (176-519): 4.82e-23: 107: 10.95
+	Sc
		795434 SMD3_YEAST (1-101): 2.43e-33: 114: 44.55		CLF1_YEAST (1-406): 4.43e-16: 84.7: 10.90
+	Hs
		300299 LSM4_HUMAN (6-91): 6.14e-35: 119: 27.59		PRP6_HUMAN (6-319): 2.78e-13: 75.8: 10.00
+	Hs
		300104 SMD3_HUMAN (3-115): 8.34e-34: 116: 59.29		PRP6_HUMAN (6-319): 2.78e-13: 75.8: 10.00
+	Hs
		912738 SMD3_HUMAN (3-115): 8.34e-34: 116: 59.29		SYF1_HUMAN (34-306): 6.26e-13: 74.7: 13.93
+	Sc
		746365 LSM2_YEAST (9-97): 1.26e-29: 104: 17.58		CLF1_YEAST (1-406): 4.43e-16: 84.7: 10.90
+	Hs
		300294 LSM2_HUMAN (9-96): 2.49e-32: 111: 22.22		PRP6_HUMAN (6-319): 2.78e-13: 75.8: 10.00
+	Hs
		582190 SMD1_HUMAN (8-100): 1.54e-32: 112: 25.81		NUCL_HUMAN (581-671): 1.67e-09: 63.7: 17.39
+	Sc
		376759 LSM2_YEAST (9-97): 1.26e-29: 104: 17.58		PABP_YEAST (583-756): 4.04e-09: 62: 27.96