HitPredict

Interactor 1: LSM1 (O15116)
U6 snRNA-associated Sm-like protein LSm1 (Cancer-associated Sm-like) (Small nuclear ribonuclear CaSm)
Gene: LSM1

Interactor 2: RUXG (P62308)
Small nuclear ribonucleoprotein G (snRNP-G) (Sm protein G) (Sm-G) (SmG)
Gene: SNRPG

Species: Homo sapiens

Source: biogrid

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.38	1.00	0.618

Property	Details
Experiments	29395067
Identification Methods	proximity labelling technology
Interaction Type	physical association

Property	Details
Interacting Pfam domains	LSM~LSM
Common GO terms	GO:0003723 - RNA binding GO:0005634 - nucleus GO:0005829 - cytosol GO:0008380 - RNA splicing
Homologous interactions	19

Homologous interactions

Color coding for hit scores

	1 133 Hs			1 76
+	Hs
		167681 LSM1_HUMAN (1-133): 3.57e-53: 165: 100.00		LSM6_HUMAN (3-75): 3.42e-27: 95.5: 26.03
+	Hs
		167725 LSM1_HUMAN (1-133): 3.57e-53: 165: 100.00		LSM7_HUMAN (3-76): 1.74e-24: 89.4: 32.93
+	Hs
		167678 LSM1_HUMAN (1-133): 3.57e-53: 165: 100.00		RUXF_HUMAN (5-73): 4.25e-24: 87.8: 24.64
+	Hs
		167663 LSM1_HUMAN (1-133): 3.57e-53: 165: 100.00		RSMB_HUMAN (1-70): 6.75e-22: 86.3: 21.25
+	At
		1228011 LSM1B_ARATH (7-118): 1.52e-37: 125: 48.21		LSM6A_ARATH (2-74): 8.3e-27: 94.8: 26.03
+	Dm
		1368680 Q9W2K2_DROME (1-124): 3.53e-39: 130: 63.71		Q9VJI7_DROME (3-76): 1.16e-21: 82.4: 31.33
+	At
		1228013 LSM1B_ARATH (7-118): 1.52e-37: 125: 48.21		LSM7_ARATH (1-75): 1.92e-23: 86.7: 35.29
+	Hs
		321388 LSM8_HUMAN (7-95): 2.25e-31: 108: 33.33		LSM6_HUMAN (3-75): 3.42e-27: 95.5: 26.03
+	Sc
		810514 LSM1_YEAST (4-123): 5.07e-34: 118: 40.98		LSM1_YEAST (9-74): 1.16e-21: 84: 30.99
+	Dm
		1376063 Q9W087_DROME (8-97): 1.7e-31: 109: 26.37		Q9W2P5_DROME (1-75): 1.23e-25: 91.7: 24.68
+	Dm
		1097032 Q9W087_DROME (8-97): 1.7e-31: 109: 26.37		RUXF_DROME (1-74): 1.57e-24: 89: 27.03
+	Hs
		321438 LSM8_HUMAN (7-95): 2.25e-31: 108: 33.33		LSM7_HUMAN (3-76): 1.74e-24: 89.4: 32.93
+	Hs
		321392 LSM8_HUMAN (7-95): 2.25e-31: 108: 33.33		RSMN_HUMAN (1-70): 1.26e-22: 88.2: 21.25
+	Hs
		321386 LSM8_HUMAN (7-95): 2.25e-31: 108: 33.33		RUXF_HUMAN (5-73): 4.25e-24: 87.8: 24.64
+	At
		1340905 LSM7_ARATH (4-88): 3.76e-28: 100: 28.89		LSM6A_ARATH (2-74): 8.3e-27: 94.8: 26.03
+	Sc
		810527 LSM1_YEAST (4-123): 5.07e-34: 118: 40.98		LSM7_YEAST (3-75): 2.92e-19: 76.4: 32.14
+	Hs
		321370 LSM8_HUMAN (7-95): 2.25e-31: 108: 33.33		RSMB_HUMAN (1-70): 6.75e-22: 86.3: 21.25
+	Dm
		1368679 Q9W087_DROME (8-97): 1.7e-31: 109: 26.37		Q9VJI7_DROME (3-76): 1.16e-21: 82.4: 31.33
+	Sc
		810530 LSM1_YEAST (4-123): 5.07e-34: 118: 40.98		LSM3_YEAST (4-72): 2.35e-10: 53: 28.57