HitPredict

Interactor 1: RENT1 (P30771)
ATP-dependent helicase NAM7 (EC 3.6.4.12) (EC 3.6.4.13) (Nonsense-mediated mRNA decay protein 1) (Nuclear accommodation of mitochondria 7 protein) (Up-frameshift suppressor 1)
Gene: NAM7

Interactor 2: LSM7 (P53905)
LSM complex subunit LSM7
Gene: LSM7

Species: Saccharomyces cerevisiae S288C

Source: biogrid

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.57	0.60	0.586

Property	Details
Experiments	30275269, 39437715
Identification Methods	affinity chromatography technology, protein complementation assay
Interaction Type	physical association, direct interaction

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0000956 - nuclear-transcribed mRNA catabolic process GO:0003723 - RNA binding GO:0005737 - cytoplasm
Homologous interactions	7

Homologous interactions

Color coding for hit scores

	1 971 Sc			1 115
+	Sc
		721636 RENT1_YEAST (1-971): 0: 1317: 100.00		LSM1_YEAST (3-110): 2.94e-28: 102: 28.57
+	Sc
		721650 RENT1_YEAST (1-971): 0: 1317: 100.00		LSM3_YEAST (25-110): 2.59e-21: 82.7: 31.03
+	Hs
		991219 RENT1_HUMAN (37-902): 0: 1142: 53.69		RSMN_HUMAN (23-103): 1.07e-28: 105: 28.40
+	Hs
		574402 RENT1_HUMAN (37-902): 0: 1142: 53.69		RSMB_HUMAN (23-103): 1.03e-27: 103: 28.40
+	Hs
		344562 RENT1_HUMAN (37-902): 0: 1142: 53.69		LSM8_HUMAN (30-110): 1.17e-21: 83.4: 24.69
+	Sc
		817143 SEN1_YEAST (222-879): 1.13e-156: 512: 23.04		RSMB_YEAST (23-107): 9.07e-19: 78.9: 28.13
+	Hs
		344516 SMBP2_HUMAN (292-893): 9.55e-155: 484: 25.84		LSM8_HUMAN (30-110): 1.17e-21: 83.4: 24.69