HitPredict

Interactor 1: RENT1 (P30771)
ATP-dependent helicase NAM7 (EC 3.6.4.12) (EC 3.6.4.13) (Nonsense-mediated mRNA decay protein 1) (Nuclear accommodation of mitochondria 7 protein) (Up-frameshift suppressor 1)
Gene: NAM7

Interactor 2: LSM3 (P57743)
LSM complex subunit LSM3 (SmX4 protein)
Gene: LSM3

Species: Saccharomyces cerevisiae S288C

Source: biogrid

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.68	0.60	0.642

Property	Details
Experiments	19740761, 30275269, 39437715
Identification Methods	affinity chromatography technology, protein complementation assay
Interaction Type	physical association, direct interaction

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0003723 - RNA binding GO:0005737 - cytoplasm
Homologous interactions	8

Homologous interactions

Color coding for hit scores

	1 971 Sc			1 89
+	Sc
		721636 RENT1_YEAST (1-971): 0: 1317: 100.00		LSM1_YEAST (8-84): 1.39e-21: 84.5: 29.87
+	Sc
		721648 RENT1_YEAST (1-971): 0: 1317: 100.00		LSM7_YEAST (2-83): 1.07e-20: 80.6: 30.23
+	Sc
		721624 RENT1_YEAST (1-971): 0: 1317: 100.00		LSM5_YEAST (4-83): 2.8e-19: 76.4: 24.69
+	Hs
		991219 RENT1_HUMAN (37-902): 0: 1142: 53.69		RSMN_HUMAN (10-86): 1.37e-24: 93.7: 26.51
+	Hs
		574402 RENT1_HUMAN (37-902): 0: 1142: 53.69		RSMB_HUMAN (10-86): 3.54e-24: 92.9: 26.51
+	Hs
		344562 RENT1_HUMAN (37-902): 0: 1142: 53.69		LSM8_HUMAN (6-89): 7.19e-22: 82.9: 23.81
+	Sc
		1025181 SEN1_YEAST (222-879): 1.13e-156: 512: 23.04		SMD2_YEAST (4-76): 1.35e-20: 80.2: 30.67
+	Hs
		344516 SMBP2_HUMAN (292-893): 9.55e-155: 484: 25.84		LSM8_HUMAN (6-89): 7.19e-22: 82.9: 23.81