HitPredict

Interactor 1: RSE1 (Q04693)
Pre-mRNA-splicing factor RSE1 (RNA splicing and ER to Golgi transport factor 1) (Spliceosome-associated protein 130)
Gene: RSE1

Interactor 2: HSH49 (Q99181)
Protein HSH49
Gene: HSH49

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.90 1.00 0.949

The method score is based on:

Property Details
Experiments 11805837, 16554755, 34349264, 15565172, 16429126, 37968396
Identification Methods anti tag coimmunoprecipitation, affinity chromatography technology, tandem affinity purification
Interaction Type physical association, association

The annotation score is based on:

Property Details
Interacting Pfam domains CPSF_A~RRM_1
Common GO terms GO:0000398 - mRNA splicing, via spliceosome
GO:0005634 - nucleus
GO:0005681 - spliceosomal complex
GO:0005684 - U2-type spliceosomal complex
GO:0005686 - U2 snRNP
and 2 others

more...
Homologous interactions 2

Homologous interactions

Color coding for hit scores

1 1361
Sc

1 213
+ Sc
+ Hs

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024