HitPredict

Interactor 1: SQD (Q08473)
RNA-binding protein squid (Heterogeneous nuclear ribonucleoprotein 40) (HNRNP 40)
Gene: SQD

Interactor 2: Q9W1I0 (Q9W1I0)
TAR DNA-binding protein-43 homolog, isoform A
Gene: TBPH

Species: Drosophila melanogaster

Source: biogrid

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.58 1.00 0.768

The method score is based on:

Property Details
Experiments 29617352, 24492607
Identification Methods affinity chromatography technology, far western blotting
Interaction Type physical association, direct interaction

The annotation score is based on:

Property Details
Interacting Pfam domains RRM_1~RRM_1
Common GO terms GO:0003723 - RNA binding
GO:0005634 - nucleus
GO:0005654 - nucleoplasm
GO:0010468 - regulation of gene expression
GO:0033119 - negative regulation of RNA splicing
Homologous interactions 20

Homologous interactions (Top 20)

Color coding for hit scores

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Service provided by Combinatics, Japan

Last updated: 15 Jul 2024