HitPredict

Interactor 1: Q9SUN5 (Q9SUN5)
Small nuclear ribonucleoprotein-associated protein
Gene: SMB

Interactor 2: SMD1B (Q9SY09)
Small nuclear ribonucleoprotein SmD1b (AtSmD1-b)
Gene: SMD1B

Species: Arabidopsis thaliana

Source: intact

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.34	1.00	0.590

Property	Details
Experiments	21798944
Identification Methods	two hybrid array
Interaction Type	physical association

Property	Details
Interacting Pfam domains	LSM~LSM
Common GO terms	GO:1990904 - ribonucleoprotein complex
Homologous interactions	17

Homologous interactions

Color coding for hit scores

	1 257 At			1 116
+	Hs
		574526 RSMB_HUMAN (1-175): 1.17e-30: 115: 53.41		LSM2_HUMAN (1-93): 2.65e-35: 118: 27.37
+	Hs
		574533 RSMB_HUMAN (1-175): 1.17e-30: 115: 53.41		LSM4_HUMAN (1-89): 7.51e-35: 118: 24.44
+	Hs
		574205 RSMB_HUMAN (1-175): 1.17e-30: 115: 53.41		SMD1_HUMAN (1-96): 2.89e-34: 116: 73.96
+	Hs
		574207 RSMB_HUMAN (1-175): 1.17e-30: 115: 53.41		SMD3_HUMAN (2-109): 4.63e-32: 110: 23.15
+	At
		1425523 Q9FI15_ARATH (1-226): 1.32e-26: 105: 79.74		SMD1B_ARATH (1-99): 1.51e-35: 119: 100.00
+	Hs
		991274 RSMN_HUMAN (1-168): 3.28e-25: 101: 53.85		LSM2_HUMAN (1-93): 2.65e-35: 118: 27.37
+	Hs
		991277 RSMN_HUMAN (1-168): 3.28e-25: 101: 53.85		LSM4_HUMAN (1-89): 7.51e-35: 118: 24.44
+	Hs
		974355 RSMN_HUMAN (1-168): 3.28e-25: 101: 53.85		SMD1_HUMAN (1-96): 2.89e-34: 116: 73.96
+	Hs
		574201 RSMB_HUMAN (1-175): 1.17e-30: 115: 53.41		RUXF_HUMAN (3-69): 1.24e-27: 98.5: 28.36
+	Dm
		1052591 RSMB_DROME (1-199): 1.09e-23: 96.6: 49.01		SMD1_DROME (1-94): 5.85e-34: 115: 71.28
+	Hs
		974715 RSMN_HUMAN (1-168): 3.28e-25: 101: 53.85		SMD3_HUMAN (2-109): 4.63e-32: 110: 23.15
+	Dm
		232170 RSMB_DROME (1-199): 1.09e-23: 96.6: 49.01		SMD3_DROME (2-109): 1.48e-32: 113: 20.37
+	Sc
		817148 RSMB_YEAST (1-88): 3.67e-25: 100: 40.82		SMD1_YEAST (1-116): 9.31e-31: 108: 37.06
+	Sc
		795872 RSMB_YEAST (1-88): 3.67e-25: 100: 40.82		LSM2_YEAST (1-87): 7.6e-29: 101: 29.21
+	Sc
		817120 RSMB_YEAST (1-88): 3.67e-25: 100: 40.82		SMD3_YEAST (2-89): 1.92e-28: 101: 28.41
+	Hs
		973880 RSMN_HUMAN (1-168): 3.28e-25: 101: 53.85		RUXF_HUMAN (3-69): 1.24e-27: 98.5: 28.36
+	Sc
		817114 RSMB_YEAST (1-88): 3.67e-25: 100: 40.82		LSM4_YEAST (1-76): 3.75e-15: 69.3: 27.59