HitPredict

Interactor 1: RPOB (P0A8V2)
DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta)
Gene: RPOB

Interactor 2: NUSG (P0AFG0)
Transcription termination/antitermination protein NusG
Gene: NUSG

Species: Escherichia coli K-12

Source: intact

Category: High-throughput

Confidence: High

Method score Annotation score Interaction score
0.62 1.00 0.789

The method score is based on:

Property Details
Experiments 16606699, 15690043
Identification Methods affinity chromatography technology, tandem affinity purification, pull down
Interaction Type physical association, association

The annotation score is based on:

Property Details
Interacting Pfam domains NusG~RNA_pol_Rpb2_1, KOW~RNA_pol_Rpb2_6, NusG~RNA_pol_Rpb2_6, KOW~RNA_pol_Rpb2_7
Common GO terms GO:0005829 - cytosol
GO:0008023 - transcription elongation factor complex
GO:0031564 - transcription antitermination
GO:0032784 - regulation of DNA-templated transcription elongation
Homologous interactions 1

Homologous interactions

Color coding for hit scores

1 1342
Ec

1 181
+ Mp

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024