Protein: LSM7
LSM complex subunit LSM7

Gene: LSM7
Organism: Saccharomyces cerevisiae S288C
Interactions: 79
UniProt ID: P53905

Gene Ontology (top 5):
GO:0000290 - deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000398 - mRNA splicing, via spliceosome
GO:0000932 - P-body
GO:0000956 - nuclear-transcribed mRNA catabolic process
GO:0003723 - RNA binding

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

678719

PAT1
Deadenylation-dependent mRNA-decapping factor PAT1

10

7

Small-scale

0.975

High

864121

LSM1
LSM1-LSM7 complex subunit LSM1

10

20

Small-scale

0.974

High

924553

LSM3
LSM complex subunit LSM3

8

20

Small-scale

0.968

High

795905

LSM2
LSM complex subunit LSM2

7

20

Small-scale

0.967

High

818034

LSM4
LSM complex subunit LSM4

6

20

Small-scale

0.955

High

865271

LSM8
LSM2-LSM8 complex subunit LSM8

6

20

Small-scale

0.942

High

818474

LSM5
LSM complex subunit LSM5

6

15

Small-scale

0.934

High

924558

LSM6
LSM complex subunit LSM6

5

20

Small-scale

0.928

High

892969

SART3
U4/U6 snRNA-associated-splicing factor PRP24

5

9

Small-scale

0.925

High

780202

SN114
Pre-mRNA-splicing factor SNU114

3

14

High-throughput

0.861

High

924557

SMD2
Small nuclear ribonucleoprotein Sm D2

3

12

High-throughput

0.861

High

751768

PRP8
Pre-mRNA-splicing factor 8

2

9

High-throughput

0.789

High

812098

DHH1
ATP-dependent RNA helicase DHH1

6

8

High-throughput

0.730

High

744143

BRR2
Pre-mRNA-splicing helicase BRR2

6

20

Small-scale

0.724

High

627861

PRP4
U4/U6 small nuclear ribonucleoprotein PRP4

4

15

High-throughput

0.697

High

645490

XRN1
5'-3' exoribonuclease 1

4

4

High-throughput

0.691

High

625035

PRP6
Pre-mRNA-splicing factor 6

3

20

High-throughput

0.662

High

924568

SNU66
66 kDa U4/U6.U5 small nuclear ribonucleoprotein component

3

9

Small-scale

0.662

High

924561

DIB1
Spliceosomal protein DIB1

2

7

High-throughput

0.621

High

924567

SNU23
23 kDa U4/U6.U5 small nuclear ribonucleoprotein component

2

3

High-throughput

0.621

High

817139

RSMB
Small nuclear ribonucleoprotein-associated protein B

1

14

High-throughput

0.618

High

924552

RUXF
Small nuclear ribonucleoprotein F

1

20

High-throughput

0.618

High

924555

PRP3
U4/U6 small nuclear ribonucleoprotein PRP3

1

10

High-throughput

0.618

High

924563

RU2A
U2 small nuclear ribonucleoprotein A'

1

10

High-throughput

0.618

High

886345

PRP31
Pre-mRNA-processing factor 31

2

9

High-throughput

0.601

High

453980

IF4E
Eukaryotic translation initiation factor 4E

2

3

High-throughput

0.588

High

721648

RENT1
ATP-dependent helicase NAM7

2

7

Small-scale

0.586

High

545826

SSB1
Ribosome-associated molecular chaperone SSB1

2

5

High-throughput

0.552

High

924570

DCP1
mRNA-decapping enzyme subunit 1

1

2

Small-scale

0.515

High

825206

HOS4
Protein HOS4

1

1

High-throughput

0.508

High

924562

VAM6
Vacuolar morphogenesis protein 6

1

3

High-throughput

0.508

High

801886

KSP1
Serine/threonine-protein kinase KSP1

1

2

High-throughput

0.501

High

849574

YFG6
Y' element ATP-dependent helicase YFL066C

1

0

High-throughput

0.486

High

436482

RS31
Ubiquitin-ribosomal protein eS31 fusion protein [Cleaved into: Ubiquitin; Small ribosomal subunit protein eS31

1

1

High-throughput

0.479

High

579854

HSC82
ATP-dependent molecular chaperone HSC82

1

2

High-throughput

0.479

High

707842

TF2B
Transcription initiation factor IIB

1

2

High-throughput

0.479

High

727227

HS104
Heat shock protein 104

1

3

High-throughput

0.479

High

743776

RML2
Large ribosomal subunit protein uL2m

1

2

High-throughput

0.479

High

783940

RM07
Large ribosomal subunit protein uL5m

1

2

High-throughput

0.479

High

924556

RM01
Large ribosomal subunit protein uL1m

1

3

High-throughput

0.479

High

924559

MHR1
Large ribosomal subunit protein mL67

1

2

High-throughput

0.479

High

924564

SCC1
Sister chromatid cohesion protein 1

1

1

High-throughput

0.479

High

924566

CLF1
Pre-mRNA-splicing factor CLF1

1

20

Small-scale

0.479

High

527371

HSP72
Heat shock protein SSA2

1

6

High-throughput

0.445

High

676235

MAS5
Mitochondrial protein import protein MAS5

1

2

High-throughput

0.445

High

739178

PRP19
Pre-mRNA-processing factor 19

1

15

Small-scale

0.445

High

742131

HSP7F
Heat shock protein homolog SSE1

1

8

High-throughput

0.445

High

804359

SSZ1
Ribosome-associated complex subunit SSZ1

1

1

High-throughput

0.445

High

554630

RM02
Large ribosomal subunit protein bL27m

1

2

High-throughput

0.437

High

569509

RM31
Large ribosomal subunit protein mL60

1

2

High-throughput

0.437

High

628170

RM33
Large ribosomal subunit protein uL30m

1

2

High-throughput

0.437

High

647933

RM08
Large ribosomal subunit protein bL17m

1

2

High-throughput

0.437

High

648000

RM20
Large ribosomal subunit protein mL58

1

2

High-throughput

0.437

High

657460

RM25
Large ribosomal subunit protein mL59

1

2

High-throughput

0.437

High

678199

IMG1
Large ribosomal subunit protein bL19m

1

2

High-throughput

0.437

High

678610

IMG2
Large ribosomal subunit protein mL49

1

2

High-throughput

0.437

High

725742

RM09
Large ribosomal subunit protein uL3m

1

3

High-throughput

0.437

High

736291

RM41
Large ribosomal subunit protein uL23m

1

2

High-throughput

0.437

High

778229

RM38
Large ribosomal subunit protein uL14m

1

2

High-throughput

0.437

High

783808

RM03
Large ribosomal subunit protein mL44

1

2

High-throughput

0.437

High

783879

RM04
Large ribosomal subunit protein uL29m

1

1

High-throughput

0.437

High

784006

RM10
Large ribosomal subunit protein uL15m

1

2

High-throughput

0.437

High

784180

RM24
Large ribosomal subunit protein bL28m

1

2

High-throughput

0.437

High

784224

RM27
Large ribosomal subunit protein mL41

1

2

High-throughput

0.437

High

784275

RM28
Large ribosomal subunit protein mL40

1

2

High-throughput

0.437

High

784340

RM17
Large ribosomal subunit protein mL46

1

2

High-throughput

0.437

High

784460

RM39
Large ribosomal subunit protein bL33m

1

2

High-throughput

0.437

High

784499

RM40
Large ribosomal subunit protein uL24m

1

2

High-throughput

0.437

High

792633

RM16
Large ribosomal subunit protein uL16m

1

2

High-throughput

0.437

High

828553

RN49
Large ribosomal subunit protein bL21m

1

2

High-throughput

0.437

High

909784

RL4P
Large ribosomal subunit protein uL4m

1

2

High-throughput

0.437

High

918418

EIF2A
Eukaryotic translation initiation factor 2A

1

3

High-throughput

0.437

High

922926

RM50
Large ribosomal subunit protein bL9m

1

2

High-throughput

0.437

High

924278

RM22
Large ribosomal subunit protein uL22m

1

2

High-throughput

0.437

High

924554

RM13
Large ribosomal subunit protein mL50

1

2

High-throughput

0.437

High

924560

RM35
Large ribosomal subunit protein mL38

1

2

High-throughput

0.437

High

924569

RM23
Large ribosomal subunit protein uL13m

1

3

High-throughput

0.437

High

744762

MG101
Mitochondrial genome maintenance protein MGM101

1

0

Small-scale

0.249

Low

924565

POM33
Pore membrane protein of 33 kDa

1

0

Small-scale

0.249

Low


Service provided by Combinatics, Japan

Last updated: 11Aug2025