HitPredict

Interactor 1: LSM4 (Q19952)
Probable U6 snRNA-associated Sm-like protein LSm4
Gene: lsm-4

Interactor 2: Q23543 (Q23543)
U6 snRNA-associated Sm-like protein LSm7
Gene: lsm-7

Species: Caenorhabditis elegans

Source: intact

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.34	1.00	0.590

Property	Details
Experiments	11731503
Identification Methods	two hybrid
Interaction Type	physical association

Property	Details
Interacting Pfam domains	LSM~LSM
Common GO terms	GO:0000398 - mRNA splicing, via spliceosome GO:0000956 - nuclear-transcribed mRNA catabolic process GO:0005688 - U6 snRNP GO:0005737 - cytoplasm GO:0097526 - spliceosomal tri-snRNP complex
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 123 Ce			1 104
+	Hs
		1460921 LSM4_HUMAN (2-87): 1.58e-38: 128: 73.26		LSM7_HUMAN (4-103): 2.13e-34: 115: 57.00
+	Dm
		1478475 Q9VKW8_DROME (2-105): 1.08e-37: 126: 64.42		Q9VJI7_DROME (2-101): 6.94e-30: 104: 55.45
+	Hs
		1460917 LSM2_HUMAN (2-95): 1.55e-32: 111: 28.87		LSM7_HUMAN (4-103): 2.13e-34: 115: 57.00
+	Hs
		991277 LSM4_HUMAN (2-87): 1.58e-38: 128: 73.26		RSMN_HUMAN (12-86): 2.96e-24: 93.8: 25.97
+	Hs
		574533 LSM4_HUMAN (2-87): 1.58e-38: 128: 73.26		RSMB_HUMAN (12-86): 9.36e-24: 92.3: 25.97
+	Dm
		1479985 Q9VKW8_DROME (2-105): 1.08e-37: 126: 64.42		RUXG_DROME (9-91): 1.31e-24: 90: 32.53
+	Dm
		1478478 Q9VTW6_DROME (2-90): 3.88e-32: 110: 29.35		Q9VJI7_DROME (2-101): 6.94e-30: 104: 55.45
+	Hs
		974301 LSM4_HUMAN (2-87): 1.58e-38: 128: 73.26		LSM3_HUMAN (1-87): 1.49e-22: 85.7: 29.03
+	Hs
		344583 LSM4_HUMAN (2-87): 1.58e-38: 128: 73.26		LSM8_HUMAN (16-96): 6.23e-22: 83.8: 28.40
+	Hs
		178060 LSM4_HUMAN (2-87): 1.58e-38: 128: 73.26		LSM1_HUMAN (15-104): 3.96e-21: 83: 24.44
+	Dm
		1479999 Q9VKW8_DROME (2-105): 1.08e-37: 126: 64.42		Q9W2K2_DROME (16-98): 7.93e-21: 82.3: 24.10
+	Dm
		1303482 Q9VKW8_DROME (2-105): 1.08e-37: 126: 64.42		Q8IMX8_DROME (9-87): 7.84e-21: 81.1: 32.94
+	Dm
		1479993 Q9VKW8_DROME (2-105): 1.08e-37: 126: 64.42		Q9W087_DROME (16-104): 6.98e-21: 81.1: 26.97
+	Hs
		991274 LSM2_HUMAN (2-95): 1.55e-32: 111: 28.87		RSMN_HUMAN (12-86): 2.96e-24: 93.8: 25.97
+	Hs
		974222 LSM2_HUMAN (2-95): 1.55e-32: 111: 28.87		RUXG_HUMAN (9-91): 5.26e-26: 93.4: 30.12
+	Hs
		574526 LSM2_HUMAN (2-95): 1.55e-32: 111: 28.87		RSMB_HUMAN (12-86): 9.36e-24: 92.3: 25.97
+	Hs
		974295 LSM2_HUMAN (2-95): 1.55e-32: 111: 28.87		LSM3_HUMAN (1-87): 1.49e-22: 85.7: 29.03
+	Hs
		344579 LSM2_HUMAN (2-95): 1.55e-32: 111: 28.87		LSM8_HUMAN (16-96): 6.23e-22: 83.8: 28.40
+	Hs
		178058 LSM2_HUMAN (2-95): 1.55e-32: 111: 28.87		LSM1_HUMAN (15-104): 3.96e-21: 83: 24.44
+	Dm
		1303484 Q9VTW6_DROME (2-90): 3.88e-32: 110: 29.35		Q8IMX8_DROME (9-87): 7.84e-21: 81.1: 32.94