HitPredict

Interactor 1: RPOD (P00579)
RNA polymerase sigma factor RpoD (Sigma-70)
Gene: RPOD

Interactor 2: MELR (P0ACH8)
Melibiose operon regulatory protein
Gene: MELR

Species: Escherichia coli K-12

Source: intact

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.63	0.60	0.616

Property	Details
Experiments	24561554, 14982625
Identification Methods	two hybrid, genetic interference, biochemical, two hybrid array
Interaction Type	direct interaction, physical association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0003677 - DNA binding
Homologous interactions	8

Homologous interactions

Color coding for hit scores

	1 613 Ec			1 302
+	Ec
		340845 RPOD_ECOLI (1-613): 0: 642: 100.00		RHAR_ECOLI (23-296): 3.3e-79: 243: 19.20
+	Ec
		340844 RPOD_ECOLI (1-613): 0: 642: 100.00		RHAS_ECOLI (23-298): 6.16e-72: 225: 16.55
+	Ec
		340896 RPOD_ECOLI (1-613): 0: 642: 100.00		YPDC_ECOLI (45-294): 4.03e-59: 192: 16.80
+	Ec
		340878 RPOD_ECOLI (1-613): 0: 642: 100.00		CHBR_ECOLI (32-298): 2.15e-53: 177: 18.73
+	Ec
		340882 RPOD_ECOLI (1-613): 0: 642: 100.00		GADX_ECOLI (44-298): 1.11e-52: 175: 17.58
+	Ec
		340863 RPOD_ECOLI (1-613): 0: 642: 100.00		ARAC_ECOLI (47-298): 2.29e-51: 172: 15.59
+	Ec
		340843 RPOD_ECOLI (1-613): 0: 642: 100.00		ADA_ECOLI (117-292): 2.15e-24: 102: 17.61
+	Ss
		938249 SIGA_SYNY3 (187-611): 5.17e-86: 276: 37.41		P73364_SYNY3 (101-292): 2.54e-41: 145: 19.49