HitPredict

Interactor 1: NCBP2 (P52298)
Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (Cell proliferation-inducing gene 55 protein) (NCBP 20 kDa subunit) (CBP20) (NCBP-interacting protein 1) (NIP1)
Gene: NCBP2

Interactor 2: RBM39 (Q14498)
RNA-binding protein 39 (CAPER alpha) (CAPERalpha) (Hepatocellular carcinoma protein 1) (RNA-binding motif protein 39) (RNA-binding region-containing protein 2) (Splicing factor HCC1)
Gene: RBM39

Species: Homo sapiens

Source: intact

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.47	1.00	0.691

Property	Details
Experiments	35271311
Identification Methods	affinity chromatography technology, anti tag coimmunoprecipitation
Interaction Type	physical association, association

Property	Details
Interacting Pfam domains	RRM_1~RRM_1
Common GO terms	GO:0003723 - RNA binding GO:0005654 - nucleoplasm GO:0008380 - RNA splicing
Homologous interactions	17

Homologous interactions

Color coding for hit scores

	1 156 Hs			1 530
+	Hs
		516518 PABP1_HUMAN (4-156): 7.45e-28: 109: 18.41		RBM39_HUMAN (1-530): 2.78e-101: 316: 100.00
+	Hs
		1031328 PABP4_HUMAN (4-156): 2.89e-27: 107: 17.18		RBM39_HUMAN (1-530): 2.78e-101: 316: 100.00
+	Hs
		516425 NCBP2_HUMAN (1-156): 2.27e-48: 154: 100.00		PABP1_HUMAN (41-426): 4.09e-61: 214: 19.08
+	Hs
		853881 NCBP2_HUMAN (1-156): 2.27e-48: 154: 100.00		PABP4_HUMAN (41-422): 3.94e-60: 211: 17.22
+	Hs
		516730 PABP1_HUMAN (4-156): 7.45e-28: 109: 18.41		PUF60_HUMAN (141-513): 7.12e-66: 225: 19.41
+	Hs
		1031490 PABP4_HUMAN (4-156): 2.89e-27: 107: 17.18		PUF60_HUMAN (141-513): 7.12e-66: 225: 19.41
+	Hs
		516339 PABP1_HUMAN (4-156): 7.45e-28: 109: 18.41		PABP1_HUMAN (41-426): 4.09e-61: 214: 19.08
+	Sc
		376958 NCBP2_YEAST (10-150): 3.97e-39: 132: 52.48		PABP_YEAST (40-441): 6.66e-53: 190: 12.17
+	Hs
		516495 PABP1_HUMAN (4-156): 7.45e-28: 109: 18.41		PABP4_HUMAN (41-422): 3.94e-60: 211: 17.22
+	Hs
		516689 PABP1_HUMAN (4-156): 7.45e-28: 109: 18.41		PABP3_HUMAN (41-435): 1.54e-59: 209: 17.08
+	Hs
		474021 PABP4_HUMAN (4-156): 2.89e-27: 107: 17.18		PAB4L_HUMAN (247-522): 4e-43: 159: 18.15
+	Hs
		474019 ELAV2_HUMAN (33-122): 1.29e-25: 101: 21.11		PAB4L_HUMAN (247-522): 4e-43: 159: 18.15
+	Hs
		516484 PABP1_HUMAN (4-156): 7.45e-28: 109: 18.41		ELAV2_HUMAN (434-530): 7.45e-16: 81.1: 10.89
+	Hs
		161948 PABP1_HUMAN (4-156): 7.45e-28: 109: 18.41		HNRDL_HUMAN (144-309): 3.62e-15: 79.7: 31.93
+	Hs
		1020249 PABP4_HUMAN (4-156): 2.89e-27: 107: 17.18		ELAV2_HUMAN (434-530): 7.45e-16: 81.1: 10.89
+	Xl
		1265032 ELAV2_XENLA (7-155): 8.23e-26: 102: 16.67		ELAV2_XENLA (381-530): 3.69e-17: 85.4: 10.32
+	Hs
		162035 PABP4_HUMAN (4-156): 2.89e-27: 107: 17.18		HNRDL_HUMAN (144-309): 3.62e-15: 79.7: 31.93