HitPredict

Interactor 1: LSM8 (P47093)
LSM2-LSM8 complex subunit LSM8
Gene: LSM8

Interactor 2: RUXF (P54999)
Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF)
Gene: SMX3

Species: Saccharomyces cerevisiae S288C

Source: biogrid

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.38	1.00	0.618

Property	Details
Experiments	37968396
Identification Methods	affinity chromatography technology
Interaction Type	physical association

Property	Details
Interacting Pfam domains	LSM~LSM
Common GO terms	GO:0000398 - mRNA splicing, via spliceosome GO:0005634 - nucleus GO:0005681 - spliceosomal complex GO:0005737 - cytoplasm GO:0046540 - U4/U6 x U5 tri-snRNP complex and 1 others more... GO:0071001 - U4/U6 snRNP
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 109 Sc			1 86
+	At
		1320156 LSM1B_ARATH (1-105): 4.79e-33: 113: 18.58		LSM6A_ARATH (1-84): 2.33e-36: 119: 38.10
+	Dm
		1173256 Q9W087_DROME (3-87): 2.92e-29: 102: 29.67		RUXF_DROME (7-86): 8.71e-35: 115: 53.75
+	Hs
		344525 LSM8_HUMAN (1-85): 1.34e-29: 103: 27.47		RUXF_HUMAN (12-84): 3.54e-34: 113: 57.53
+	Hs
		178009 LSM1_HUMAN (2-102): 1.21e-28: 102: 21.70		RUXF_HUMAN (12-84): 3.54e-34: 113: 57.53
+	Hs
		344527 LSM8_HUMAN (1-85): 1.34e-29: 103: 27.47		LSM6_HUMAN (9-83): 1.58e-33: 112: 40.00
+	Hs
		178012 LSM1_HUMAN (2-102): 1.21e-28: 102: 21.70		LSM6_HUMAN (9-83): 1.58e-33: 112: 40.00
+	At
		1444293 LSM7_ARATH (5-83): 1.76e-23: 88.1: 16.85		LSM6A_ARATH (1-84): 2.33e-36: 119: 38.10
+	Dm
		1489261 Q9W087_DROME (3-87): 2.92e-29: 102: 29.67		Q9W2P5_DROME (16-83): 2.97e-30: 103: 41.18
+	Hs
		973869 RUXG_HUMAN (3-69): 6.81e-25: 90.8: 20.29		RUXF_HUMAN (12-84): 3.54e-34: 113: 57.53
+	Dm
		1173255 RUXG_DROME (3-69): 1e-23: 88.1: 21.74		RUXF_DROME (7-86): 8.71e-35: 115: 53.75
+	Hs
		974107 RUXG_HUMAN (3-69): 6.81e-25: 90.8: 20.29		LSM6_HUMAN (9-83): 1.58e-33: 112: 40.00
+	Hs
		71566 RUXGL_HUMAN (3-69): 6.5e-23: 85.8: 20.29		RUXF_HUMAN (12-84): 3.54e-34: 113: 57.53
+	Sc
		865284 LSM8_YEAST (1-109): 1.65e-35: 118: 100.00		LSM6_YEAST (4-83): 8.56e-21: 80.1: 26.19
+	Dm
		1489774 Q9W2K2_DROME (2-88): 2.48e-25: 93.9: 23.91		Q9W2P5_DROME (16-83): 2.97e-30: 103: 41.18
+	Dm
		1488187 RUXG_DROME (3-69): 1e-23: 88.1: 21.74		Q9W2P5_DROME (16-83): 2.97e-30: 103: 41.18
+	Hs
		974076 LSM7_HUMAN (5-81): 4.89e-19: 77: 17.24		RUXF_HUMAN (12-84): 3.54e-34: 113: 57.53
+	Hs
		974346 LSM7_HUMAN (5-81): 4.89e-19: 77: 17.24		LSM6_HUMAN (9-83): 1.58e-33: 112: 40.00
+	Hs
		973880 RSMN_HUMAN (2-64): 5.97e-17: 74.7: 20.00		RUXF_HUMAN (12-84): 3.54e-34: 113: 57.53
+	Hs
		974310 RSMN_HUMAN (2-64): 5.97e-17: 74.7: 20.00		LSM6_HUMAN (9-83): 1.58e-33: 112: 40.00
+	Sc
		864133 LSM1_YEAST (2-108): 1.12e-29: 106: 20.18		LSM6_YEAST (4-83): 8.56e-21: 80.1: 26.19