Protein: YPT1
GTP-binding protein YPT1 (Protein YP2) (Rab GTPase YPT1) (Transport GTPase YPT1)

Gene: YPT1
Organism: Saccharomyces cerevisiae S288C
Interactions: 112
UniProt ID: P01123

Gene Ontology (top 5):
GO:0000045 - autophagosome assembly
GO:0000139 - Golgi membrane
GO:0000149 - SNARE binding
GO:0000407 - phagophore assembly site
GO:0003924 - GTPase activity

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

350859

RAEP
Rab proteins geranylgeranyltransferase component A

6

20

Small-scale

0.952

High

350882

GDI1
Rab GDP-dissociation inhibitor

12

20

Small-scale

0.878

High

350900

ATG1
Serine/threonine-protein kinase ATG1

3

6

Small-scale

0.876

High

350857

DSS4
Protein DSS4

5

0

Small-scale

0.868

High

350855

HRR25
Casein kinase I homolog HRR25

2

4

Small-scale

0.806

High

350865

TOR1
Serine/threonine-protein kinase TOR1

2

3

Small-scale

0.806

High

350833

SEC4
Ras-related protein SEC4

2

18

High-throughput

0.789

High

350828

YPT1
GTP-binding protein YPT1

2

17

Small-scale

0.778

High

350927

GYP1
GTPase-activating protein GYP1

2

16

Small-scale

0.778

High

350875

YPT31
GTP-binding protein YPT31/YPT8

2

17

Small-scale

0.754

High

350898

YIP1
Protein transport protein YIP1

4

5

Small-scale

0.698

High

350910

SED5
Integral membrane protein SED5

4

12

Small-scale

0.696

High

350905

YIF1
Protein transport protein YIF1

3

3

Small-scale

0.674

High

350935

ATG11
Autophagy-related protein 11

3

0

Small-scale

0.647

High

350899

YIP4
Protein YIP4

2

5

Small-scale

0.633

High

350892

TRS85
Trafficking protein particle complex III-specific subunit 85

3

0

Small-scale

0.619

High

350846

VPS15
Serine/threonine-protein kinase VPS15

1

4

High-throughput

0.618

High

350847

VPS34
Phosphatidylinositol 3-kinase VPS34

1

9

High-throughput

0.618

High

350848

KC11
Casein kinase I homolog 1

1

5

High-throughput

0.618

High

350849

SIS1
Protein SIS1

1

2

High-throughput

0.618

High

350915

BET5
Trafficking protein particle complex subunit BET5

1

0

Small-scale

0.614

High

350917

TRS23
Trafficking protein particle complex subunit 23

1

0

Small-scale

0.614

High

350924

ATG23
Autophagy-related protein 23

2

0

Small-scale

0.605

High

350843

PGTB2
Geranylgeranyl transferase type-2 subunit beta

2

3

Small-scale

0.602

High

350929

ATG9
Autophagy-related protein 9

2

0

Small-scale

0.598

High

350851

USO1
Intracellular protein transport protein USO1

2

5

Small-scale

0.595

High

350868

BET3
Trafficking protein particle complex subunit BET3

2

1

Small-scale

0.595

High

350938

TRS33
Trafficking protein particle complex subunit 33

2

1

Small-scale

0.595

High

350832

KAPC
cAMP-dependent protein kinase type 3

1

0

Small-scale

0.586

High

350852

MAS5
Mitochondrial protein import protein MAS5

1

1

High-throughput

0.575

High

350904

PRA1
Prenylated Rab acceptor 1

1

11

Small-scale

0.573

High

350829

HSP82
ATP-dependent molecular chaperone HSP82

2

4

High-throughput

0.571

High

350874

TRS20
Trafficking protein particle complex subunit 20

2

0

Small-scale

0.569

High

350884

COG3
Conserved oligomeric Golgi complex subunit 3

1

1

Small-scale

0.561

High

350885

SSB2
Ribosome-associated molecular chaperone SSB2

2

6

High-throughput

0.552

High

350845

SEC22
Protein transport protein SEC22

1

4

Small-scale

0.550

High

350923

ATG17
Autophagy-related protein 17

1

0

Small-scale

0.549

High

350839

ARF1
ADP-ribosylation factor 1

1

18

High-throughput

0.541

High

350862

UBC6
Ubiquitin-conjugating enzyme E2 6

1

1

High-throughput

0.536

High

350909

ALO
D-arabinono-1,4-lactone oxidase

1

0

High-throughput

0.518

High

350858

PEP12
Syntaxin PEP12

1

11

High-throughput

0.508

High

350906

COG6
Conserved oligomeric Golgi complex subunit 6

1

1

High-throughput

0.508

High

350838

SEC7
Protein transport protein SEC7

1

9

Small-scale

0.501

High

350883

GEA2
ARF guanine-nucleotide exchange factor 2

1

8

Small-scale

0.501

High

350890

ROG3
Protein ROG3

1

1

Small-scale

0.501

High

350894

GEA1
ARF guanine-nucleotide exchange factor 1

1

9

Small-scale

0.501

High

350912

ROD1
Protein ROD1

1

1

Small-scale

0.501

High

350830

EF1A
Elongation factor 1-alpha

1

1

High-throughput

0.500

High

350908

ALDH6
Magnesium-activated aldehyde dehydrogenase, cytosolic

1

1

High-throughput

0.500

High

350902

COG2
Conserved oligomeric Golgi complex subunit 2

1

0

Small-scale

0.493

High

350850

BOS1
Protein transport protein BOS1

1

0

High-throughput

0.486

High

350931

RBD2
Rhomboid-type serine protease 2

1

0

High-throughput

0.486

High

350844

VPS33
Vacuolar protein sorting-associated protein 33

1

6

Small-scale

0.481

High

350916

TR130
Trafficking protein particle complex II-specific subunit 130

1

1

Small-scale

0.481

High

350888

UFE1
Syntaxin UFE1

1

0

Small-scale

0.480

High

350914

TRS31
Trafficking protein particle complex subunit 31

1

0

Small-scale

0.480

High

350934

LDB19
Protein LDB19

1

0

Small-scale

0.480

High

350831

GAL1
Galactokinase

1

0

High-throughput

0.479

High

350834

UBI4P
Polyubiquitin [Cleaved into: Ubiquitin]

1

8

High-throughput

0.479

High

350835

RL40A
Ubiquitin-ribosomal protein eL40A fusion protein [Cleaved into: Ubiquitin; Large ribosomal subunit protein eL40A

1

5

High-throughput

0.479

High

350841

HSC82
ATP-dependent molecular chaperone HSC82

1

4

High-throughput

0.479

High

350842

SEC23
Protein transport protein SEC23

1

2

High-throughput

0.479

High

350863

HSP78
Heat shock protein 78, mitochondrial

1

1

High-throughput

0.479

High

350866

ATG19
Autophagy-related protein 19

1

1

Small-scale

0.479

High

350867

YKT6
Synaptobrevin homolog YKT6

1

4

Small-scale

0.479

High

350869

LONM
Lon protease homolog, mitochondrial

1

4

High-throughput

0.479

High

350872

ATG8
Autophagy-related protein 8

1

5

High-throughput

0.479

High

350880

LAA1
AP-1 accessory protein LAA1

1

3

High-throughput

0.479

High

350886

SEC24
Protein transport protein SEC24

1

2

High-throughput

0.479

High

350889

RPN11
Ubiquitin carboxyl-terminal hydrolase RPN11

1

2

High-throughput

0.479

High

350895

VATG
V-type proton ATPase subunit G

1

1

High-throughput

0.479

High

350907

SAM50
Sorting assembly machinery 50 kDa subunit

1

1

High-throughput

0.479

High

350918

TR120
Trafficking protein particle complex II-specific subunit 120

1

1

Small-scale

0.479

High

350919

SEC13
Protein transport protein SEC13

1

4

High-throughput

0.479

High

350921

RTN1
Reticulon-like protein 1

1

13

Small-scale

0.479

High

350928

AP3D
AP-3 complex subunit delta

1

3

High-throughput

0.479

High

350932

ATG34
Autophagy-related protein 34

1

1

Small-scale

0.479

High

350936

SMC6
Structural maintenance of chromosomes protein 6

1

1

High-throughput

0.479

High

350860

SMY2
Protein SMY2

1

0

High-throughput

0.458

High

350873

ATG14
Autophagy-related protein 14

1

0

High-throughput

0.458

High

350881

IF4F1
Eukaryotic initiation factor 4F subunit p150

1

0

Small-scale

0.458

High

350891

SFT1
Protein transport protein SFT1

1

0

High-throughput

0.458

High

350893

ATG27
Autophagy-related protein 27

1

0

High-throughput

0.458

High

350896

TOM22
Mitochondrial import receptor subunit TOM22

1

0

High-throughput

0.458

High

350913

BECN1
Vacuolar protein sorting-associated protein 30

1

0

High-throughput

0.458

High

350937

ATG40
Autophagy-related protein 40

1

0

Small-scale

0.458

High

350911

UBC7
Ubiquitin-conjugating enzyme E2 7

1

5

High-throughput

0.457

High

350836

HSP77
Import motor subunit, mitochondrial

1

8

High-throughput

0.445

High

350837

HSP71
Heat shock protein SSA1

1

5

High-throughput

0.445

High

350840

SSB1
Ribosome-associated molecular chaperone SSB1

1

6

High-throughput

0.445

High

350925

TLG2
t-SNARE affecting a late Golgi compartment protein 2

1

11

Small-scale

0.445

High

350930

RRP6
Exosome complex exonuclease RRP6

1

2

Small-scale

0.437

High

350877

SSZ1
Ribosome-associated complex subunit SSZ1

1

5

High-throughput

0.407

High

350854

TF2B
Transcription initiation factor IIB

2

0

High-throughput

0.300

High

350901

YIP5
Protein YIP5

2

0

Small-scale

0.300

High

350933

TRM13
tRNA:m(4)X modification enzyme TRM13

1

0

High-throughput

0.282

High

350870

KTR3
Probable mannosyltransferase KTR3

1

0

High-throughput

0.265

Low

350887

MAD2
Mitotic spindle checkpoint component MAD2

1

0

Small-scale

0.261

Low

350853

PEX3
Peroxisomal biogenesis factor 3

1

0

High-throughput

0.249

Low

350856

SPT16
FACT complex subunit SPT16

1

0

High-throughput

0.249

Low

350861

SC61A
Protein transport protein SEC61

1

0

High-throughput

0.249

Low

350864

NCBP1
Nuclear cap-binding protein complex subunit 1

1

0

Small-scale

0.249

Low

350871

NU170
Nucleoporin NUP170

1

0

High-throughput

0.249

Low

350876

RPN1
26S proteasome regulatory subunit RPN1

1

0

High-throughput

0.249

Low

350878

RRP4
Exosome complex component RRP4

1

0

Small-scale

0.249

Low

350879

NAB3
Nuclear polyadenylated RNA-binding protein 3

1

0

Small-scale

0.249

Low

350897

SPT20
Transcription factor SPT20

1

0

Small-scale

0.249

Low

350903

NRD1
Protein NRD1

1

0

Small-scale

0.249

Low

350920

IVY1
Protein IVY1

1

0

Small-scale

0.249

Low

350922

MMS22
E3 ubiquitin-protein ligase substrate receptor MMS22

1

0

High-throughput

0.249

Low

350926

RBX1
RING-box protein HRT1

1

0

High-throughput

0.232

Low


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Last updated: 15 Jul 2024