Protein: CLP1
mRNA cleavage and polyadenylation factor CLP1

Gene: CLP1
Organism: Saccharomyces cerevisiae S288C
Interactions: 30
UniProt ID: Q08685

Gene Ontology (top 5):
GO:0003723 - RNA binding
GO:0005524 - ATP binding
GO:0005634 - nucleus
GO:0005849 - mRNA cleavage factor complex
GO:0006388 - tRNA splicing, via endonucleolytic cleavage and ligation

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

811246

PCF11
Protein PCF11

19

4

Small-scale

0.989

High

671458

RNA15
mRNA 3'-end-processing protein RNA15

10

0

Small-scale

0.720

High

671431

RNA14
mRNA 3'-end-processing protein RNA14

6

0

Small-scale

0.702

High

1054426

YSH1
Endoribonuclease YSH1

3

3

Small-scale

0.680

High

708409

TF2B
Transcription initiation factor IIB

3

1

Small-scale

0.640

High

1056341

CFT1
Protein CFT1

2

1

Small-scale

0.629

High

481795

HSP73
Heat shock protein SSA3

2

3

High-throughput

0.621

High

1030141

PTA1
Pre-tRNA-processing protein PTA1

2

0

Small-scale

0.587

High

808393

SEC31
Protein transport protein SEC31

2

2

High-throughput

0.567

High

843183

PFS2
Polyadenylation factor subunit 2

1

2

Small-scale

0.501

High

802117

IMDH2
Inosine-5'-monophosphate dehydrogenase 2

1

1

High-throughput

0.489

High

764201

SPT23
Protein SPT23

1

0

High-throughput

0.486

High

441398

KAPB
cAMP-dependent protein kinase type 2

1

0

High-throughput

0.480

High

470605

RPB2
DNA-directed RNA polymerase II subunit RPB2

1

0

Small-scale

0.480

High

921033

SSU72
RNA polymerase II subunit A C-terminal domain phosphatase SSU72

1

0

Small-scale

0.480

High

1064676

YRA1
RNA annealing protein YRA1

1

0

Small-scale

0.480

High

594611

RPB3
DNA-directed RNA polymerase II subunit RPB3

1

1

High-throughput

0.479

High

1064677

RIO1
Serine/threonine-protein kinase RIO1

1

1

High-throughput

0.479

High

745952

GSP2
GTP-binding nuclear protein GSP2/CNR2

1

0

Small-scale

0.460

High

580190

HSC82
ATP-dependent molecular chaperone HSC82

1

0

High-throughput

0.458

High

751910

TFC4
Transcription factor tau 131 kDa subunit

1

0

Small-scale

0.458

High

757549

NCBP1
Nuclear cap-binding protein complex subunit 1

1

0

High-throughput

0.458

High

858367

SAC3
Nuclear mRNA export protein SAC3

1

0

High-throughput

0.458

High

1046191

PDS5
Sister chromatid cohesion protein PDS5

1

0

High-throughput

0.458

High

1064675

SCC1
Sister chromatid cohesion protein 1

1

0

High-throughput

0.458

High

525403

HSP71
Heat shock protein SSA1

1

3

High-throughput

0.445

High

527895

HSP72
Heat shock protein SSA2

1

3

High-throughput

0.445

High

676430

MAS5
Mitochondrial protein import protein MAS5

1

1

High-throughput

0.445

High

820004

SSB2
Ribosome-associated molecular chaperone SSB2

1

4

High-throughput

0.445

High

886185

NUP42
Nucleoporin NUP42

1

0

Small-scale

0.251

Low


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Last updated: 11Aug2025