HitPredict - High confidence protein-protein interactions

Download interactions: TXT MITAB-2.5

Interaction	Interactor	Experiments	Homologs	Category	Interaction Score	Confidence
470449	RPB3 DNA-directed RNA polymerase II subunit RPB3	26	17	Small-scale	0.991	High
401824	RPB1 DNA-directed RNA polymerase II subunit RPB1	19	20	Small-scale	0.987	High
470545	T2FB Transcription initiation factor IIF subunit beta	8	2	Small-scale	0.969	High
470478	RPB9 DNA-directed RNA polymerase II subunit RPB9	8	12	Small-scale	0.969	High
470501	RPB7 DNA-directed RNA polymerase II subunit RPB7	9	11	Small-scale	0.967	High
470458	RPAB2 DNA-directed RNA polymerases I, II, and III subunit RPABC2	7	8	Small-scale	0.965	High
470456	RPB4 DNA-directed RNA polymerase II subunit RPB4	8	3	Small-scale	0.961	High
470477	SPT5 Transcription elongation factor SPT5	7	4	Small-scale	0.960	High
470461	RPAB5 DNA-directed RNA polymerases I, II, and III subunit RPABC5	5	9	Small-scale	0.924	High
470525	RPB11 DNA-directed RNA polymerase II subunit RPB11	5	9	Small-scale	0.919	High
470544	T2FA Transcription initiation factor IIF subunit alpha	7	0	Small-scale	0.914	High
470517	PAF1 RNA polymerase II-associated protein 1	2	1	Small-scale	0.768	High
470480	TF2B Transcription initiation factor IIB	2	5	Small-scale	0.754	High
470571	H3 Histone H3	2	4	Small-scale	0.754	High
470457	RPAB1 DNA-directed RNA polymerases I, II, and III subunit RPABC1	9	10	Small-scale	0.752	High
470459	RPAB3 DNA-directed RNA polymerases I, II, and III subunit RPABC3	7	6	Small-scale	0.742	High
470494	MCES mRNA cap guanine-N(7) methyltransferase	2	0	High-throughput	0.736	High
470470	RNA15 mRNA 3'-end-processing protein RNA15	1	1	Small-scale	0.724	High
470551	SET2 Histone-lysine N-methyltransferase, H3 lysine-36 specific	6	2	Small-scale	0.721	High
470576	NOP3 Serine/arginine	2	0	Small-scale	0.716	High
470534	RTR1 RNA polymerase II subunit B1 CTD phosphatase RTR1	5	3	Small-scale	0.709	High
470502	TAF14 Transcription initiation factor TFIID subunit 14	6	0	Small-scale	0.701	High
470599	CDC73 Cell division control protein 73	4	1	Small-scale	0.692	High
470532	RSP5 E3 ubiquitin-protein ligase RSP5	4	10	Small-scale	0.692	High
470565	NRD1 Protein NRD1	1	2	Small-scale	0.691	High
470497	SPT4 Transcription elongation factor SPT4	4	1	Small-scale	0.691	High
470603	IWR1 RNA polymerase II nuclear localization protein IWR1	4	1	Small-scale	0.691	High
470600	ASR1 Alcohol-sensitive RING finger protein 1	5	0	Small-scale	0.688	High
470597	IWS1 Transcription factor SPN1	4	1	High-throughput	0.688	High
470553	GPN1 GPN-loop GTPase 1	10	13	Small-scale	0.685	High
470537	RAD26 DNA repair and recombination protein RAD26	1	3	Small-scale	0.647	High
470489	SPT16 FACT complex subunit SPT16	3	1	Small-scale	0.640	High
470441	HSP71 Heat shock protein SSA1	3	6	High-throughput	0.634	High
470455	MED14 Mediator of RNA polymerase II transcription subunit 14	3	1	Small-scale	0.633	High
470528	PCF11 Protein PCF11	2	3	Small-scale	0.629	High
470472	RAD51 DNA repair protein RAD51	2	5	High-throughput	0.621	High
419323	H2A1 Histone H2A.1	1	3	High-throughput	0.618	High
434705	RS3 Small ribosomal subunit protein uS3	1	4	High-throughput	0.618	High
458973	RPAC1 DNA-directed RNA polymerases I and III subunit RPAC1	1	17	Small-scale	0.618	High
470434	RPB2 DNA-directed RNA polymerase II subunit RPB2	1	10	High-throughput	0.618	High
470463	RPC2 DNA-directed RNA polymerase III subunit RPC2	1	10	High-throughput	0.618	High
470506	CENPA Histone H3-like centromeric protein CSE4	1	4	High-throughput	0.618	High
470508	ELF1 Transcription elongation factor 1	1	1	High-throughput	0.618	High
470521	MIP6 RNA-binding protein MIP6	1	1	Small-scale	0.618	High
470538	RPAB4 DNA-directed RNA polymerases I, II, and III subunit RPABC4	1	6	High-throughput	0.618	High
470602	SUB2 ATP-dependent RNA helicase SUB2	1	1	High-throughput	0.618	High
470518	LEO1 RNA polymerase-associated protein LEO1	1	0	Small-scale	0.614	High
470575	UBP3 Ubiquitin carboxyl-terminal hydrolase 3	2	2	Small-scale	0.601	High
470591	RT103 Regulator of Ty1 transposition protein 103	2	10	Small-scale	0.601	High
470468	SIS1 Protein SIS1	2	3	High-throughput	0.588	High
470608	TAF10 SAGA complex/transcription factor TFIID complex subunit TAF10	2	1	High-throughput	0.588	High
470564	SSU72 RNA polymerase II subunit A C-terminal domain phosphatase SSU72	2	0	Small-scale	0.588	High
454678	KAPR cAMP-dependent protein kinase regulatory subunit	1	0	Small-scale	0.586	High
470527	NAB3 Nuclear polyadenylated RNA-binding protein 3	1	0	High-throughput	0.586	High
470579	HAP5 Transcriptional activator HAP5	1	0	High-throughput	0.586	High
470611	YRA1 RNA annealing protein YRA1	1	0	High-throughput	0.586	High
470465	ESS1 Peptidyl-prolyl cis-trans isomerase ESS1	2	0	High-throughput	0.585	High
470467	SPT6 Transcription elongation factor SPT6	2	1	High-throughput	0.584	High
470536	ATAD2 ATPase histone chaperone YTA7	2	6	Small-scale	0.584	High
470542	DSN1 Kinetochore-associated protein DSN1	2	2	High-throughput	0.584	High
470550	RPN11 Ubiquitin carboxyl-terminal hydrolase RPN11	2	5	High-throughput	0.584	High
470572	SEN1 Helicase SEN1	2	3	Small-scale	0.584	High
470589	POB3 FACT complex subunit POB3	2	3	High-throughput	0.584	High
392038	HSP82 ATP-dependent molecular chaperone HSP82	2	4	High-throughput	0.571	High
470444	SSB1 Ribosome-associated molecular chaperone SSB1	2	6	High-throughput	0.571	High
470482	HS104 Heat shock protein 104	2	6	High-throughput	0.571	High
470479	URA7 CTP synthase 1	2	1	High-throughput	0.567	High
440816	KIN28 Serine/threonine-protein kinase KIN28	1	6	Small-scale	0.561	High
149495	RS9A Small ribosomal subunit protein uS4A	1	2	High-throughput	0.553	High
433353	RL26A Large ribosomal subunit protein uL24A	1	1	High-throughput	0.553	High
470617	DBP10 ATP-dependent RNA helicase DBP10	1	5	High-throughput	0.553	High
470442	HSP72 Heat shock protein SSA2	2	6	High-throughput	0.552	High
470535	SSB2 Ribosome-associated molecular chaperone SSB2	2	6	High-throughput	0.552	High
470492	MED18 Mediator of RNA polymerase II transcription subunit 18	2	0	Small-scale	0.547	High
470588	UFO1 Ubiquitin ligase complex F-box protein UFO1	1	0	Small-scale	0.537	High
416995	VDAC1 Non-selective voltage-gated ion channel 1	1	3	High-throughput	0.536	High
440999	KAPA cAMP-dependent protein kinase type 1	1	4	High-throughput	0.536	High
441312	KAPB cAMP-dependent protein kinase type 2	1	4	High-throughput	0.536	High
470443	METK1 S-adenosylmethionine synthase 1	1	1	High-throughput	0.536	High
470481	XPO1 Exportin-1	1	4	High-throughput	0.536	High
470507	MAOM NAD-dependent malic enzyme, mitochondrial	1	1	High-throughput	0.536	High
470512	TAF5 SAGA complex/transcription factor TFIID complex subunit TAF5	1	2	High-throughput	0.536	High
470522	MED6 Mediator of RNA polymerase II transcription subunit 6	1	2	High-throughput	0.536	High
470547	ELP2 Elongator complex protein 2	1	2	Small-scale	0.536	High
470566	BRE5 UBP3-associated protein BRE5	1	2	High-throughput	0.536	High
470583	GCN5 Histone acetyltransferase GCN5	1	8	High-throughput	0.536	High
470598	GPN3 GPN-loop GTPase 3	2	13	Small-scale	0.533	High
470491	CBS Cystathionine beta-synthase	1	1	High-throughput	0.515	High
470526	SPT8 SAGA complex subunit SPT8	1	0	High-throughput	0.513	High
470554	YMR1 Phosphoinositide 3-phosphatase	1	0	High-throughput	0.513	High
470580	GIP3 GLC7-interacting protein 3	1	0	High-throughput	0.513	High
470590	TAF9 SAGA complex/transcription factor TFIID complex subunit TAF9	1	0	High-throughput	0.513	High
470452	FUS3 Mitogen-activated protein kinase FUS3	1	1	High-throughput	0.501	High
470469	RNA14 mRNA 3'-end-processing protein RNA14	1	2	Small-scale	0.501	High
470510	T2EB Transcription initiation factor IIE subunit beta	1	1	Small-scale	0.501	High
364242	CDK1 Cyclin-dependent kinase 1	1	1	High-throughput	0.500	High
437866	KAPC cAMP-dependent protein kinase type 3	1	4	High-throughput	0.500	High
470462	DBF2 Cell cycle protein kinase DBF2	1	5	High-throughput	0.500	High
470464	SAN1 Protein SAN1	1	1	High-throughput	0.500	High
470466	PP2A2 Serine/threonine-protein phosphatase PP2A-2 catalytic subunit	1	5	High-throughput	0.500	High
470485	PP4C Serine/threonine-protein phosphatase 4 catalytic subunit	1	4	High-throughput	0.500	High
470498	PRS6B 26S proteasome regulatory subunit 6B homolog	1	2	High-throughput	0.500	High
470505	KDX1 Serine/threonine-protein kinase KDX1	1	4	High-throughput	0.500	High
470513	CHK1 Serine/threonine-protein kinase CHK1	1	1	High-throughput	0.500	High
470567	CBK1 Serine/threonine-protein kinase CBK1	1	3	High-throughput	0.500	High
470587	KU80 ATP-dependent DNA helicase II subunit 2	1	2	High-throughput	0.500	High
470613	RAD59 DNA repair protein RAD59	1	1	High-throughput	0.500	High
470446	GFA1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing]	1	4	High-throughput	0.489	High
470515	GID4 GID complex substrate-recognition subunit 4	1	1	High-throughput	0.489	High
470520	SYNC Asparagine--tRNA ligase, cytoplasmic	1	3	High-throughput	0.489	High
470548	GCN20 Protein GCN20	1	6	High-throughput	0.489	High
470615	HSP42 Heat shock protein 42	1	2	High-throughput	0.489	High
470447	UBC5 Ubiquitin-conjugating enzyme E2-16 kDa	1	0	Small-scale	0.480	High
470509	T2EA Transcription initiation factor IIE subunit alpha	1	0	Small-scale	0.480	High
470561	RTF1 RNA polymerase-associated protein RTF1	1	0	Small-scale	0.480	High
470605	CLP1 mRNA cleavage and polyadenylation factor CLP1	1	0	Small-scale	0.480	High
470460	FAR1 Cyclin-dependent kinase inhibitor FAR1	1	0	High-throughput	0.479	High
470475	MGMT Methylated-DNA--protein-cysteine methyltransferase	1	0	High-throughput	0.479	High
470493	RAD24 Checkpoint protein RAD24	1	0	High-throughput	0.479	High
470563	BUD32 EKC/KEOPS complex subunit BUD32	1	0	High-throughput	0.479	High
381798	H4 Histone H4	1	3	High-throughput	0.479	High
430741	ERF3 Eukaryotic peptide chain release factor GTP-binding subunit	1	3	Small-scale	0.479	High
441614	RS14A Small ribosomal subunit protein uS11A	1	1	High-throughput	0.479	High
464524	PBS2 MAP kinase kinase PBS2	1	6	High-throughput	0.479	High
470440	RS18A Small ribosomal subunit protein uS13A	1	2	High-throughput	0.479	High
470450	EF3A Elongation factor 3A	1	7	High-throughput	0.479	High
470474	CDC48 Cell division control protein 48	1	3	High-throughput	0.479	High
470486	RPC3 DNA-directed RNA polymerase III subunit RPC3	1	3	High-throughput	0.479	High
470488	HOG1 Mitogen-activated protein kinase HOG1	1	2	High-throughput	0.479	High
470495	RSSA1 Small ribosomal subunit protein uS2A	1	1	High-throughput	0.479	High
470496	SMY2 Protein SMY2	1	2	High-throughput	0.479	High
470504	RS27A Small ribosomal subunit protein eS27A	1	1	High-throughput	0.479	High
470511	GBLP Small ribosomal subunit protein RACK1	1	3	High-throughput	0.479	High
470519	RS20 Small ribosomal subunit protein uS10	1	3	High-throughput	0.479	High
470530	IF4F1 Eukaryotic initiation factor 4F subunit p150	1	2	High-throughput	0.479	High
470549	BUD27 Bud site selection protein 27	1	2	High-throughput	0.479	High
470558	UBP15 Ubiquitin carboxyl-terminal hydrolase 15	1	2	High-throughput	0.479	High
470569	APJ1 J domain-containing protein APJ1	1	3	High-throughput	0.479	High
470570	SAM50 Sorting assembly machinery 50 kDa subunit	1	1	High-throughput	0.479	High
470574	MCE1 mRNA-capping enzyme subunit alpha	1	1	High-throughput	0.479	High
470582	TOM1 E3 ubiquitin-protein ligase TOM1	1	10	High-throughput	0.479	High
470585	RUVB1 RuvB-like protein 1	1	8	High-throughput	0.479	High
470586	RBA50 RNA polymerase II-associated protein RBA50	1	3	High-throughput	0.479	High
470592	RBS1 RNA-binding suppressor of PAS kinase protein 1	1	1	Small-scale	0.479	High
470594	MMS22 E3 ubiquitin-protein ligase substrate receptor MMS22	1	2	High-throughput	0.479	High
470596	TFC6 Transcription factor tau 91 kDa subunit	1	2	High-throughput	0.479	High
470604	SGO1 Shugoshin	1	2	High-throughput	0.479	High
470609	YL11B Transposon Ty1-LR1 Gag-Pol polyprotein	1	5	High-throughput	0.479	High
470610	ATG9 Autophagy-related protein 9	1	1	High-throughput	0.479	High
470618	RUVB2 RuvB-like protein 2	1	8	High-throughput	0.479	High
470453	HPR1 THO complex subunit HPR1	1	0	Small-scale	0.458	High
470499	MED9 Mediator of RNA polymerase II transcription subunit 9	1	0	Small-scale	0.458	High
470524	PP2C7 Protein phosphatase 2C homolog 7, mitochondrial	1	0	High-throughput	0.458	High
470531	RS26B Small ribosomal subunit protein eS26B	1	0	High-throughput	0.458	High
470568	CUZ1 CDC48-associated ubiquitin-like/zinc finger protein 1	1	0	Small-scale	0.458	High
470573	PRP38 Pre-mRNA-splicing factor 38	1	0	High-throughput	0.458	High
470581	ESP1 Separin	1	0	High-throughput	0.458	High
470593	COQ9 Ubiquinone biosynthesis protein COQ9, mitochondrial	1	0	High-throughput	0.458	High
470595	PDP3 NuA3 HAT complex component PDP3	1	0	Small-scale	0.458	High
470612	SIZ2 E3 SUMO-protein ligase SIZ2	1	0	High-throughput	0.458	High
470484	DBF20 Serine/threonine-protein kinase DBF20	1	6	High-throughput	0.457	High
394124	EF1A Elongation factor 1-alpha	1	3	High-throughput	0.445	High
456305	ILVB Acetolactate synthase catalytic subunit, mitochondrial	1	2	High-throughput	0.445	High
470438	UBI4P Polyubiquitin [Cleaved into: Ubiquitin]	1	5	High-throughput	0.445	High
470448	VATB V-type proton ATPase subunit B	1	2	High-throughput	0.445	High
470451	APA1 Protein APA1 [Includes: Diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase 1	1	1	High-throughput	0.445	High
470473	MAS5 Mitochondrial protein import protein MAS5	1	3	High-throughput	0.445	High
470503	DEF1 RNA polymerase II degradation factor 1	1	1	High-throughput	0.445	High
470523	SSZ1 Ribosome-associated complex subunit SSZ1	1	2	High-throughput	0.445	High
470539	LYS12 Homoisocitrate dehydrogenase, mitochondrial	1	1	High-throughput	0.445	High
470541	DJP1 DnaJ-like protein 1	1	4	High-throughput	0.445	High
470557	PHB2 Prohibitin-2	1	1	High-throughput	0.445	High
470559	UBP8 Ubiquitin carboxyl-terminal hydrolase 8	1	1	High-throughput	0.445	High
470560	ACS2 Acetyl-coenzyme A synthetase 2	1	1	High-throughput	0.445	High
470578	ADA2 SAGA complex subunit ADA2	1	3	High-throughput	0.445	High
383424	RS17A Small ribosomal subunit protein eS17A	1	2	High-throughput	0.437	High
409846	RL25 Large ribosomal subunit protein uL23	1	1	Small-scale	0.437	High
435676	RS13 Small ribosomal subunit protein uS15	1	1	High-throughput	0.437	High
454778	RS19A Small ribosomal subunit protein eS19A	1	2	High-throughput	0.437	High
470435	SYIC Isoleucine--tRNA ligase, cytoplasmic	1	1	High-throughput	0.437	High
470436	RS22A Small ribosomal subunit protein uS8A	1	2	High-throughput	0.437	High
470437	RL31A Large ribosomal subunit protein eL31A	1	1	High-throughput	0.437	High
470439	RS6A Small ribosomal subunit protein eS6A	1	2	High-throughput	0.437	High
470445	CAF20 Cap-associated protein CAF20	1	1	High-throughput	0.437	High
470471	RS2 Small ribosomal subunit protein uS5	1	4	High-throughput	0.437	High
470476	RS7A Small ribosomal subunit protein eS7A	1	2	High-throughput	0.437	High
470500	RS3A1 Small ribosomal subunit protein eS1A	1	1	High-throughput	0.437	High
470529	LAA1 AP-1 accessory protein LAA1	1	1	High-throughput	0.437	High
470555	RS12 Small ribosomal subunit protein eS12	1	2	High-throughput	0.437	High
470556	VATG V-type proton ATPase subunit G	1	1	High-throughput	0.437	High
470577	RS15 Small ribosomal subunit protein uS19	1	4	High-throughput	0.437	High
470601	VAM6 Vacuolar morphogenesis protein 6	1	2	High-throughput	0.437	High
470606	GPN2 GPN-loop GTPase 2	1	13	High-throughput	0.437	High
470607	RS10A Small ribosomal subunit protein eS10A	1	2	High-throughput	0.437	High
470619	RTP1 RNA polymerase II assembly factor RTP1	1	1	Small-scale	0.437	High
470483	MED16 Mediator of RNA polymerase II transcription subunit 16	1	0	High-throughput	0.426	High
470490	MED17 Mediator of RNA polymerase II transcription subunit 17	1	0	Small-scale	0.426	High
470614	MED1 Mediator of RNA polymerase II transcription subunit 1	1	0	High-throughput	0.426	High
368302	TRPG Multifunctional tryptophan biosynthesis protein [Includes: Anthranilate synthase component 2	1	2	High-throughput	0.407	High
455619	GPT UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase	1	0	High-throughput	0.282	High
470540	EMC5 ER membrane protein complex subunit 5	1	0	High-throughput	0.282	High
470562	MON1 Vacuolar fusion protein MON1	1	0	High-throughput	0.269	Low
470454	CDC42 Cell division control protein 42	1	0	High-throughput	0.261	Low
470487	CDC11 Cell division control protein 11	1	0	High-throughput	0.261	Low
470516	ATG12 Ubiquitin-like protein ATG12	1	0	High-throughput	0.261	Low
470543	COPB2 Coatomer subunit beta'	1	0	High-throughput	0.261	Low
470546	SKP2 F-box protein SKP2	1	0	High-throughput	0.261	Low
470616	HRT3 F-box protein HRT3	1	0	High-throughput	0.261	Low
148851	CET1 mRNA-capping enzyme subunit beta	1	0	High-throughput	0.249	Low
470514	ATG8 Autophagy-related protein 8	1	0	High-throughput	0.249	Low
470533	BIM1 Protein BIM1	1	0	High-throughput	0.249	Low
470552	MPS3 Spindle pole body assembly component MPS3	1	0	High-throughput	0.249	Low
470584	BUL2 Ubiquitin ligase-binding protein BUL2	1	0	Small-scale	0.249	Low