HitPredict

Interactor 1: Q9FPI0 (Q9FPI0)
Ribosomal RNA-processing protein 42
Gene: RRP42

Interactor 2: RRP4 (Q9ZVT7)
Exosome complex component RRP4 homolog (Ribosomal RNA-processing protein 4) (AtRRP4) (AtRrp4p)
Gene: RRP4

Species: Arabidopsis thaliana

Source: intact

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.61	1.00	0.786

Property	Details
Experiments	21798944, 18160042
Identification Methods	two hybrid, tandem affinity purification, two hybrid array
Interaction Type	direct interaction, association, physical association

Property	Details
Interacting Pfam domains	RNase_PH~RRP4_S1
Common GO terms	GO:0000178 - exosome (RNase complex) GO:0005730 - nucleolus GO:0005737 - cytoplasm
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 286 At			1 322
+	At
		1444336 CER7_ARATH (3-284): 1.85e-74: 235: 26.76		RRP4_ARATH (1-322): 6.41e-163: 458: 100.00
+	At
		1492025 Q9ZUI4_ARATH (7-275): 1.75e-58: 190: 24.91		RRP4_ARATH (1-322): 6.41e-163: 458: 100.00
+	At
		1456928 RRP41_ARATH (17-278): 7.66e-54: 176: 16.54		RRP4_ARATH (1-322): 6.41e-163: 458: 100.00
+	At
		60912 RP41L_ARATH (20-285): 4.37e-47: 160: 18.66		RRP4_ARATH (1-322): 6.41e-163: 458: 100.00
+	Hs
		1118314 EXOS8_HUMAN (4-282): 1.59e-82: 251: 28.21		EXOS2_HUMAN (26-315): 3.95e-107: 315: 38.14
+	Hs
		1118279 EXOS7_HUMAN (1-281): 3.28e-81: 248: 37.37		EXOS2_HUMAN (26-315): 3.95e-107: 315: 38.14
+	Sp
		268495 RRP45_SCHPO (1-283): 4.87e-71: 222: 23.51		RRP4_SCHPO (39-289): 2.86e-112: 330: 41.83
+	Sc
		804749 RRP45_YEAST (1-285): 1.67e-67: 213: 18.67		RRP4_YEAST (29-293): 3.87e-109: 323: 34.38
+	Sp
		1068422 RRP43_SCHPO (7-264): 8.48e-65: 205: 25.97		RRP4_SCHPO (39-289): 2.86e-112: 330: 41.83
+	Hs
		1054460 EXOS9_HUMAN (3-285): 3.7e-67: 217: 23.86		EXOS2_HUMAN (26-315): 3.95e-107: 315: 38.14
+	Dm
		1345980 Q8T4A9_DROME (2-285): 3.08e-73: 232: 25.52		Q9W1M9_DROME (30-317): 5.31e-101: 300: 35.42
+	Dm
		1177511 Q29QQ9_DROME (1-282): 1.08e-71: 224: 34.04		Q9W1M9_DROME (30-317): 5.31e-101: 300: 35.42
+	Sp
		206877 RRP41_SCHPO (9-281): 1.36e-48: 163: 16.30		RRP4_SCHPO (39-289): 2.86e-112: 330: 41.83
+	Hs
		1118340 EXOS4_HUMAN (11-284): 5.22e-53: 174: 16.55		EXOS2_HUMAN (26-315): 3.95e-107: 315: 38.14
+	Pf
		1302561 Q8ID62_PLAF7 (1-284): 9.8e-68: 219: 24.13		Q9U0I4_PLAF7 (37-286): 4.46e-85: 261: 28.52
+	Sp
		238044 RRP42_SCHPO (1-277): 4.13e-39: 140: 25.83		RRP4_SCHPO (39-289): 2.86e-112: 330: 41.83
+	Sc
		804769 RRP42_YEAST (1-274): 2.75e-41: 145: 22.54		RRP4_YEAST (29-293): 3.87e-109: 323: 34.38
+	Dm
		1479003 Q9VK19_DROME (16-279): 2.91e-50: 167: 16.92		Q9W1M9_DROME (30-317): 5.31e-101: 300: 35.42
+	Tb
		1378795 Q95Z11_9TRYP (2-284): 3.45e-48: 165: 17.37		Q95Z16_9TRYP (48-289): 4e-94: 283: 37.89
+	Tb
		1320879 Q8MPG3_9TRYP (8-254): 8.94e-40: 142: 20.00		Q95Z16_9TRYP (48-289): 4e-94: 283: 37.89