Protein: REF2
RNA end formation protein 2

Gene: REF2
Organism: Saccharomyces cerevisiae S288C
Interactions: 53
UniProt ID: P42073

Gene Ontology (top 5):
GO:0003682 - chromatin binding
GO:0003723 - RNA binding
GO:0005634 - nucleus
GO:0005829 - cytosol
GO:0005847 - mRNA cleavage and polyadenylation specificity factor complex

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

785602

SYC1
Protein SYC1

9

1

Small-scale

0.752

High

785603

CFT2
Cleavage factor two protein 2

7

1

Small-scale

0.746

High

785599

YSH1
Endoribonuclease YSH1

6

2

Small-scale

0.732

High

696355

PP12
Serine/threonine-protein phosphatase PP1-2

12

0

Small-scale

0.727

High

785596

PTA1
Pre-tRNA-processing protein PTA1

12

0

Small-scale

0.725

High

732672

SWD2
COMPASS component SWD2

8

0

Small-scale

0.718

High

785588

PFS2
Polyadenylation factor subunit 2

8

0

Small-scale

0.717

High

728147

MPE1
Protein MPE1

7

0

Small-scale

0.714

High

764808

PTI1
Protein PTI1

7

0

Small-scale

0.714

High

785598

YTH1
mRNA 3'-end-processing protein YTH1

7

0

Small-scale

0.714

High

785589

FIP1
Pre-mRNA polyadenylation factor FIP1

7

0

Small-scale

0.713

High

785595

SSU72
RNA polymerase II subunit A C-terminal domain phosphatase SSU72

6

0

Small-scale

0.702

High

667523

PAP
Poly(A) polymerase

6

0

Small-scale

0.701

High

785600

CFT1
Protein CFT1

6

0

Small-scale

0.701

High

628760

RNA14
mRNA 3'-end-processing protein RNA14

3

0

Small-scale

0.634

High

649976

BUD14
Bud site selection protein 14

2

0

High-throughput

0.605

High

593656

DBP4
ATP-dependent RNA helicase HCA4

2

0

High-throughput

0.595

High

768700

SSB2
Ribosome-associated molecular chaperone SSB2

2

1

High-throughput

0.552

High

405029

RL6B
Large ribosomal subunit protein eL6B

1

1

High-throughput

0.536

High

770401

RL13B
Large ribosomal subunit protein eL13B

1

0

High-throughput

0.513

High

785605

YRA1
RNA annealing protein YRA1

1

0

High-throughput

0.493

High

392140

H2A1
Histone H2A.1

1

1

High-throughput

0.479

High

392470

H2A2
Histone H2A.2

1

1

High-throughput

0.479

High

728706

BDF1
Bromodomain-containing factor 1

1

0

High-throughput

0.460

High

356538

H4
Histone H4

1

0

High-throughput

0.458

High

481358

RL2A
Large ribosomal subunit protein uL2A

1

0

High-throughput

0.458

High

549420

FBRL
rRNA 2'-O-methyltransferase fibrillarin

1

0

Small-scale

0.458

High

558109

RPB3
DNA-directed RNA polymerase II subunit RPB3

1

0

High-throughput

0.458

High

613857

TAF2
Transcription initiation factor TFIID subunit 2

1

0

High-throughput

0.458

High

650317

SPT5
Transcription elongation factor SPT5

1

0

High-throughput

0.458

High

662520

TF2B
Transcription initiation factor IIB

1

0

High-throughput

0.458

High

733447

KAE1
tRNA N6-adenosine threonylcarbamoyltransferase

1

0

High-throughput

0.458

High

785590

JHD2
Histone demethylase JHD2

1

0

Small-scale

0.458

High

785604

SCC1
Sister chromatid cohesion protein 1

1

0

High-throughput

0.458

High

358120

RS17A
Small ribosomal subunit protein eS17A

1

1

High-throughput

0.445

High

404619

RL7A
Large ribosomal subunit protein uL30A

1

1

High-throughput

0.445

High

511696

SSB1
Ribosome-associated molecular chaperone SSB1

1

1

High-throughput

0.445

High

535242

RS17B
Small ribosomal subunit protein eS17B

1

1

High-throughput

0.445

High

694905

HSP7F
Heat shock protein homolog SSE1

1

1

High-throughput

0.445

High

785597

RL6A
Large ribosomal subunit protein eL6A

1

1

High-throughput

0.445

High

785606

RL7B
Large ribosomal subunit protein uL30B

1

1

High-throughput

0.445

High

405215

RL17A
Large ribosomal subunit protein uL22A

1

0

High-throughput

0.426

High

491552

HSP71
Heat shock protein SSA1

1

0

High-throughput

0.426

High

785591

RL4B
Large ribosomal subunit protein uL4B

1

0

High-throughput

0.426

High

785601

SWA2
Auxilin-like clathrin uncoating factor SWA2

1

0

High-throughput

0.426

High

785607

AHA1
Hsp90 co-chaperone AHA1

1

0

High-throughput

0.426

High

731113

LHS1
Heat shock protein 70 homolog LHS1

1

1

High-throughput

0.407

High

420296

CALM
Calmodulin

1

0

Small-scale

0.292

High

767003

FIR1
Factor interacting with REF2

1

0

Small-scale

0.265

Low

785593

PEX14
Peroxisomal membrane protein PEX14

1

0

High-throughput

0.265

Low

746740

FL2D
Protein MUM2

1

0

High-throughput

0.251

Low

785594

SP105
Spindle pole body component SPC105

1

0

High-throughput

0.251

Low

785592

IMDH3
Inosine-5'-monophosphate dehydrogenase 3

1

0

High-throughput

0.232

Low


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Last updated: 15 Jul 2024