Protein: VPS54
Vacuolar protein sorting-associated protein 54 (Hepatocellular carcinoma protein 8) (Tumor antigen HOM-HCC-8) (Tumor antigen SLP-8p)

Gene: VPS54
Organism: Homo sapiens
Interactions: 41
UniProt ID: Q9P1Q0

Gene Ontology (top 5):
GO:0000938 - GARP complex
GO:0001701 - in utero embryonic development
GO:0005654 - nucleoplasm
GO:0005739 - mitochondrion
GO:0005794 - Golgi apparatus

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

1217290

VPS53
Vacuolar protein sorting-associated protein 53 homolog

5

3

Small-scale

0.718

High

1394940

VPS50
Syndetin

3

1

High-throughput

0.667

High

1200079

EIPR1
EARP and GARP complex-interacting protein 1

4

0

Small-scale

0.664

High

1454140

VPS51
Vacuolar protein sorting-associated protein 51 homolog

3

1

Small-scale

0.651

High

1323365

VPS52
Vacuolar protein sorting-associated protein 52 homolog

3

2

Small-scale

0.646

High

226237

STX6
Syntaxin-6

2

1

Small-scale

0.584

High

562456

LAMP2
Lysosome-associated membrane glycoprotein 2

2

0

High-throughput

0.575

High

249209

DSCAM
Cell adhesion molecule DSCAM

1

0

High-throughput

0.518

High

1116081

DYR1A
Dual specificity tyrosine-phosphorylation-regulated kinase 1A

1

0

High-throughput

0.518

High

981721

RAN
GTP-binding nuclear protein Ran

1

1

High-throughput

0.515

High

605534

SYN1
Synapsin-1

1

0

High-throughput

0.513

High

1454142

PSF2
DNA replication complex GINS protein PSF2

1

0

High-throughput

0.513

High

1454144

COG6
Conserved oligomeric Golgi complex subunit 6

1

0

High-throughput

0.513

High

1208906

H2B2F
Histone H2B type 2-F

1

0

High-throughput

0.493

High

1258702

IKIP
Inhibitor of nuclear factor kappa-B kinase-interacting protein

1

0

High-throughput

0.493

High

131028

HIP1
Huntingtin-interacting protein 1

1

0

High-throughput

0.493

High

442501

GELS
Gelsolin

1

0

High-throughput

0.493

High

650460

FGFR3
Fibroblast growth factor receptor 3

1

0

High-throughput

0.493

High

937125

CASP6
Caspase-6

1

0

High-throughput

0.493

High

1133929

NMDE3
Glutamate receptor ionotropic, NMDA 2C

1

0

High-throughput

0.493

High

1454141

UBQL1
Ubiquilin-1

1

0

High-throughput

0.493

High

968010

PP1A
Serine/threonine-protein phosphatase PP1-alpha catalytic subunit

1

0

Small-scale

0.480

High

630999

RAB4A
Ras-related protein Rab-4A

1

1

High-throughput

0.479

High

1368964

GOGA1
Golgin subfamily A member 1

1

1

High-throughput

0.479

High

1454143

KLH20
Kelch-like protein 20

1

0

Small-scale

0.460

High

218890

TGON2
Trans-Golgi network integral membrane protein 2

1

0

High-throughput

0.458

High

327484

ZFPL1
Zinc finger protein-like 1

1

0

High-throughput

0.458

High

374248

RASN
GTPase NRas

1

0

High-throughput

0.458

High

604250

CXA1
Gap junction alpha-1 protein

1

0

High-throughput

0.458

High

621777

RPB3
DNA-directed RNA polymerase II subunit RPB3

1

0

High-throughput

0.458

High

1141983

EEA1
Early endosome antigen 1

1

0

High-throughput

0.458

High

1227606

A16L1
Autophagy-related protein 16-1

1

0

High-throughput

0.458

High

1276346

ATG9A
Autophagy-related protein 9A

1

0

High-throughput

0.458

High

1383409

ZUP1
Zinc finger-containing ubiquitin peptidase 1

1

0

High-throughput

0.458

High

1452714

ELOV5
Very long chain fatty acid elongase 5

1

0

High-throughput

0.458

High

914360

EFNA4
Ephrin-A4

1

0

High-throughput

0.279

Low

1291397

TXND2
Thioredoxin domain-containing protein 2

1

0

High-throughput

0.279

Low

441570

CCKN
Cholecystokinin

1

0

High-throughput

0.268

Low

1454145

Q9Y649
GW128

1

0

High-throughput

0.268

Low

1233539

LTOR1
Ragulator complex protein LAMTOR1

1

0

High-throughput

0.249

Low

947069

DSCR9
Down syndrome critical region protein 9

1

0

High-throughput

0.238

Low


Service provided by Combinatics, Japan

Last updated: 11Aug2025