Protein: SQD
RNA-binding protein squid (Heterogeneous nuclear ribonucleoprotein 40) (HNRNP 40)

Gene: SQD
Organism: Drosophila melanogaster
Interactions: 71
UniProt ID: Q08473

Gene Ontology (top 5):
GO:0000184 - nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000381 - regulation of alternative mRNA splicing, via spliceosome
GO:0000398 - mRNA splicing, via spliceosome
GO:0000785 - chromatin
GO:0003723 - RNA binding

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

877799

RB27C
Heterogeneous nuclear ribonucleoprotein 27C

4

18

Small-scale

0.891

High

877827

RB87F
Heterogeneous nuclear ribonucleoprotein 87F

3

19

Small-scale

0.827

High

1064259

Q9W1I0
TAR DNA-binding protein 43

2

19

Small-scale

0.768

High

118621

M9NF14
IGF-II mRNA-binding protein, isoform L

2

20

Small-scale

0.754

High

462183

ROA1
Heterogeneous nuclear ribonucleoprotein A1

2

19

Small-scale

0.754

High

120642

M9PE01
cyclin-dependent kinase

1

4

High-throughput

0.625

High

636388

PABP
Polyadenylate-binding protein

1

17

Small-scale

0.618

High

1064213

DSOR1
Dual specificity mitogen-activated protein kinase kinase dSOR1

1

12

High-throughput

0.618

High

1064220

AKT1
RAC serine/threonine-protein kinase

1

10

High-throughput

0.618

High

1064224

Q8SYC0
Bruno 1, isoform D

1

20

Small-scale

0.618

High

1064226

Q94533
Ribosomal protein S6 kinase

1

13

High-throughput

0.618

High

1064248

Q9VR61
non-specific serine/threonine protein kinase

1

13

High-throughput

0.618

High

1064258

PDPK1
3-phosphoinositide-dependent protein kinase 1

1

9

High-throughput

0.618

High

1064244

Q9VMW2
Reticulon-like protein

2

1

High-throughput

0.584

High

1064252

ORB2
Translational regulator orb2

2

19

Small-scale

0.584

High

1064215

U2AF2
Splicing factor U2AF 50 kDa subunit

1

20

High-throughput

0.575

High

1064223

SHEP
Protein alan shepard

1

20

High-throughput

0.575

High

1064243

Q9VMV9
Reticulon-like protein

2

1

High-throughput

0.552

High

1064234

Q9VD23
Pyruvate kinase

1

1

High-throughput

0.508

High

1064237

Q9VGW7
type I protein arginine methyltransferase

1

13

Small-scale

0.501

High

1064238

CARM1
Probable histone-arginine methyltransferase CARMER

1

15

Small-scale

0.501

High

146014

O02374
Bruno

1

20

High-throughput

0.492

High

1064241

Q9VLS7
LD21067p

1

2

High-throughput

0.484

High

120296

M9PD17
Gigas, isoform B

1

2

High-throughput

0.479

High

561728

K10
DNA-binding protein K10

1

1

Small-scale

0.479

High

654241

DDX6
ATP-dependent RNA helicase me31b

1

13

High-throughput

0.479

High

777352

PARP
Poly [ADP-ribose] polymerase

1

11

Small-scale

0.479

High

1064227

FOXO
Forkhead box protein O

1

6

High-throughput

0.479

High

1064232

Q9VCC9
LD23779p

1

10

High-throughput

0.479

High

1064242

CUP
Protein cup

1

1

Small-scale

0.479

High

1064247

Q9VP20
RING-type E3 ubiquitin transferase

1

10

Small-scale

0.479

High

1064249

Q9VRV8
Transportin-1

1

11

Small-scale

0.479

High

68920

MBD56
Methyl-CpG-binding domain protein 5/6 homolog sba

1

0

High-throughput

0.458

High

831907

PEP
Zinc finger protein on ecdysone puffs

1

0

Small-scale

0.458

High

1064214

RBF
Retinoblastoma family protein

1

0

Small-scale

0.458

High

1064230

ATLAS
Atlastin

1

0

Small-scale

0.458

High

1064261

4EBP
Eukaryotic translation initiation factor 4E-binding protein

1

0

High-throughput

0.458

High

1064245

Q9VN44
FI07923p

1

10

High-throughput

0.457

High

1064217

Q7KHL0
Bancal protein

1

20

High-throughput

0.445

High

1064231

ANKHM
Ankyrin repeat and KH domain-containing protein mask

1

1

High-throughput

0.445

High

1064239

PIWI
Protein piwi

1

17

High-throughput

0.445

High

1064253

PYRG
CTP synthase

1

1

High-throughput

0.445

High

1064257

Q9VYK0
Smrter, isoform D

1

1

High-throughput

0.445

High

1064260

Q9W255
GH05812p

1

12

High-throughput

0.445

High

1064262

FL2D
Pre-mRNA-splicing regulator female-lethal(2)D

1

1

High-throughput

0.445

High

1064263

X2JCC3
poly(A)-specific ribonuclease

1

2

High-throughput

0.445

High

1064216

Q32KE1
RE04201p

1

12

High-throughput

0.442

High

119575

M9PAY7
Pi3K21B, isoform C

1

16

High-throughput

0.437

High

409163

EGFR
Epidermal growth factor receptor

1

7

High-throughput

0.437

High

871884

GAP1
GTPase-activating protein

1

6

High-throughput

0.437

High

1064218

Q7KNQ9
Connector enhancer of KSR protein CNK

1

18

High-throughput

0.437

High

1064236

Q9VEV3
Tetratricopeptide repeat protein 1

1

10

High-throughput

0.437

High

1064246

RHEB
GTP-binding protein Rheb homolog

1

3

High-throughput

0.437

High

604331

CATA
Catalase

1

0

High-throughput

0.426

High

1064219

GAR1
H/ACA ribonucleoprotein complex subunit 1

1

0

High-throughput

0.426

High

1064222

Q8IQX8
histidine--tRNA ligase

1

0

High-throughput

0.426

High

1064228

Q962S2
60S ribosomal protein L41

1

0

High-throughput

0.426

High

1064235

Q9VEA1
Eukaryotic translation initiation factor 4C

1

0

High-throughput

0.426

High

1064255

FRIZ2
Frizzled-2

1

0

High-throughput

0.426

High

99361

F3YDN6
RE08495p

1

3

High-throughput

0.407

High

1064212

ATPB2
Sodium/potassium-transporting ATPase subunit beta-2

1

1

High-throughput

0.407

High

1064221

Q8INW7
FI11475p

1

3

High-throughput

0.407

High

1064240

Q9VLB7
Rab GDP dissociation inhibitor

1

1

High-throughput

0.407

High

1064233

Q9VCS4
MIP11264p

1

0

High-throughput

0.265

Low

1064254

MED19
Mediator of RNA polymerase II transcription subunit 19

1

0

High-throughput

0.265

Low

1064256

Q9VWJ6
FI03615p

1

0

High-throughput

0.249

Low

1064229

Q9V9P0
Uncharacterized protein, isoform B

1

0

High-throughput

0.238

Low

369115

PUR2
Trifunctional purine biosynthetic protein adenosine-3 [Includes: Phosphoribosylamine--glycine ligase

1

0

High-throughput

0.232

Low

1064225

Q8T3J1
SD02419p

1

0

High-throughput

0.232

Low

1064250

VPS8
Vacuolar protein sorting-associated protein 8 homolog

1

0

Small-scale

0.232

Low

1064251

Q9VSK4
Adipose-secreted signaling protein

1

0

High-throughput

0.232

Low


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Last updated: 11Aug2025