Protein: PRP39
Pre-mRNA-processing factor 39

Gene: PRP39
Organism: Saccharomyces cerevisiae S288C
Interactions: 44
UniProt ID: P39682

Gene Ontology (top 5):
GO:0000243 - commitment complex
GO:0000395 - mRNA 5'-splice site recognition
GO:0000398 - mRNA splicing, via spliceosome
GO:0005634 - nucleus
GO:0005681 - spliceosomal complex

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

696636

RU1A
U1 small nuclear ribonucleoprotein A

7

1

Small-scale

0.748

High

763243

NAM8
Protein NAM8

7

6

Small-scale

0.744

High

763244

RU17
U1 small nuclear ribonucleoprotein 70 kDa homolog

6

5

Small-scale

0.730

High

763236

SNU71
U1 small nuclear ribonucleoprotein component SNU71

5

1

Small-scale

0.714

High

763248

SNU56
56 kDa U1 small nuclear ribonucleoprotein component

5

1

High-throughput

0.712

High

703216

PRP40
Pre-mRNA-processing protein PRP40

4

3

High-throughput

0.694

High

763249

RU1C
U1 small nuclear ribonucleoprotein C

4

1

High-throughput

0.694

High

763232

RSMB
Small nuclear ribonucleoprotein-associated protein B

4

12

High-throughput

0.686

High

763240

RUXF
Small nuclear ribonucleoprotein F

4

12

High-throughput

0.683

High

763253

NCBP2
Nuclear cap-binding protein subunit 2

4

16

Small-scale

0.676

High

763246

SMD1
Small nuclear ribonucleoprotein Sm D1

3

4

High-throughput

0.662

High

763247

PRP42
U1 small nuclear ribonucleoprotein component PRP42

3

10

High-throughput

0.662

High

763252

LUC7
Protein LUC7

3

1

High-throughput

0.662

High

732363

MUD2
Splicing factor MUD2

3

2

Small-scale

0.650

High

704670

PRP8
Pre-mRNA-splicing factor 8

2

10

Small-scale

0.605

High

763234

SMD3
Small nuclear ribonucleoprotein Sm D3

2

20

High-throughput

0.601

High

763256

BBP
Branchpoint-bridging protein

2

6

Small-scale

0.600

High

558062

RPB3
DNA-directed RNA polymerase II subunit RPB3

2

2

Small-scale

0.584

High

710173

NCBP1
Nuclear cap-binding protein complex subunit 1

2

4

High-throughput

0.584

High

763254

RU2A
U2 small nuclear ribonucleoprotein A'

2

9

Small-scale

0.584

High

676061

XPO1
Exportin-1

1

3

High-throughput

0.536

High

697210

BRR2
Pre-mRNA-splicing helicase BRR2

1

20

High-throughput

0.536

High

356484

H4
Histone H4

1

4

High-throughput

0.479

High

662270

TF2B
Transcription initiation factor IIB

1

2

High-throughput

0.479

High

694050

PUB1
Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1

1

8

High-throughput

0.479

High

763231

PRP39
Pre-mRNA-processing factor 39

1

10

Small-scale

0.479

High

763233

RUXG
Small nuclear ribonucleoprotein G

1

20

High-throughput

0.479

High

763239

APJ1
J domain-containing protein APJ1

1

1

High-throughput

0.479

High

763242

H3
Histone H3

1

4

High-throughput

0.479

High

763250

SMD2
Small nuclear ribonucleoprotein Sm D2

1

7

High-throughput

0.479

High

763257

SNU66
66 kDa U4/U6.U5 small nuclear ribonucleoprotein component

1

3

Small-scale

0.479

High

494010

HSP72
Heat shock protein SSA2

1

7

High-throughput

0.445

High

692300

PRP19
Pre-mRNA-processing factor 19

1

17

Small-scale

0.445

High

754427

SSZ1
Ribosome-associated complex subunit SSZ1

1

3

High-throughput

0.445

High

763235

JJJ2
J protein JJJ2

1

3

High-throughput

0.445

High

763241

LSM3
U6 snRNA-associated Sm-like protein LSm3

1

20

High-throughput

0.445

High

763255

CDC53
Cell division control protein 53

1

12

High-throughput

0.445

High

598625

ISY1
Pre-mRNA-splicing factor ISY1

1

6

Small-scale

0.439

High

763237

EIF2A
Eukaryotic translation initiation factor 2A

1

1

High-throughput

0.437

High

763251

VAM6
Vacuolar morphogenesis protein 6

1

0

High-throughput

0.249

Low

763258

COA3
Cytochrome c oxidase assembly factor 3, mitochondrial

1

0

High-throughput

0.249

Low

763245

UBC7
Ubiquitin-conjugating enzyme E2 7

1

0

High-throughput

0.238

Low

763238

PFD4
Prefoldin subunit 4

1

0

High-throughput

0.232

Low


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Last updated: 15 Jul 2024