HitPredict

Interactor 1: RS40 (P92965)
Serine/arginine-rich splicing factor RS40 (At-RSp40) (AtRS40)
Gene: RS40

Interactor 2: UBQ3 (Q1EC66)
Polyubiquitin 3 [Cleaved into: Ubiquitin]
Gene: UBQ3

Species: Arabidopsis thaliana

Source: biogrid

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.38	0.50	0.437

Property	Details
Experiments	18535787
Identification Methods	affinity chromatography technology
Interaction Type	physical association

Property	Details
Interacting Pfam domains	-
Common GO terms	-
Homologous interactions	17

Homologous interactions

Color coding for hit scores

	1 350 At			1 306
+	At
		186465 PABP4_ARATH (1-174): 1.07e-26: 113: 18.52		UBQ3_ARATH (1-306): 8.33e-132: 378: 100.00
+	At
		983451 PABP5_ARATH (3-178): 2.75e-24: 105: 19.47		UBQ3_ARATH (1-306): 8.33e-132: 378: 100.00
+	At
		186860 SR34_ARATH (2-281): 1.86e-19: 89.1: 29.04		UBQ3_ARATH (1-306): 8.33e-132: 378: 100.00
+	At
		58670 SR34A_ARATH (2-156): 1.24e-17: 84.1: 22.78		UBQ3_ARATH (1-306): 8.33e-132: 378: 100.00
+	Mm
		476715 TIA1_MOUSE (4-256): 1.06e-36: 138: 15.05		UBC_MOUSE (1-257): 3.33e-97: 303: 93.39
+	Rn
		1144257 PABP1_RAT (1-179): 2.39e-28: 117: 18.14		UBC_RAT (1-257): 1.1e-96: 304: 93.39
+	Mm
		476693 PABP1_MOUSE (1-179): 4.14e-28: 116: 18.14		UBC_MOUSE (1-257): 3.33e-97: 303: 93.39
+	Hs
		475708 PABP4_HUMAN (1-177): 1.58e-30: 124: 18.85		UBC_HUMAN (1-153): 2.88e-52: 183: 95.43
+	Hs
		475288 PABP1_HUMAN (1-179): 3.23e-28: 117: 18.14		UBC_HUMAN (1-153): 2.88e-52: 183: 95.43
+	Hs
		475007 SRSF1_HUMAN (3-156): 9.65e-20: 88.7: 30.72		UBB_HUMAN (153-305): 2.64e-64: 204: 95.43
+	Hs
		475665 SRSF1_HUMAN (3-156): 9.65e-20: 88.7: 30.72		UBC_HUMAN (1-153): 2.88e-52: 183: 95.43
+	Hs
		923968 SRSF1_HUMAN (3-156): 9.65e-20: 88.7: 30.72		RS27A_HUMAN (153-228): 2.61e-43: 147: 96.05
+	Hs
		397745 PABP1_HUMAN (1-179): 3.23e-28: 117: 18.14		ISG15_HUMAN (76-232): 2.64e-24: 98.1: 33.13
+	Hs
		1031342 PABP4_HUMAN (1-177): 1.58e-30: 124: 18.85		OASL_HUMAN (1-81): 1.91e-10: 63.1: 30.86
+	Hs
		397933 SRSF1_HUMAN (3-156): 9.65e-20: 88.7: 30.72		ISG15_HUMAN (76-232): 2.64e-24: 98.1: 33.13
+	Hs
		516533 PABP1_HUMAN (1-179): 3.23e-28: 117: 18.14		OASL_HUMAN (1-81): 1.91e-10: 63.1: 30.86
+	Hs
		1028556 SRSF9_HUMAN (3-212): 2.2e-22: 95.7: 28.24		OASL_HUMAN (1-81): 1.91e-10: 63.1: 30.86