Protein: WDR48
WD repeat-containing protein 48 (USP1-associated factor 1) (WD repeat endosomal protein) (p80)

Gene: WDR48
Organism: Homo sapiens
Interactions: 138
UniProt ID: Q8TAF3

Gene Ontology (top 5):
GO:0000724 - double-strand break repair via homologous recombination
GO:0003677 - DNA binding
GO:0003690 - double-stranded DNA binding
GO:0003697 - single-stranded DNA binding
GO:0005634 - nucleus

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

296325

UBP1
Ubiquitin carboxyl-terminal hydrolase 1

25

18

Small-scale

0.992

High

905391

UBP46
Ubiquitin carboxyl-terminal hydrolase 46

11

12

Small-scale

0.979

High

259296

UBP12
Ubiquitin carboxyl-terminal hydrolase 12

11

12

Small-scale

0.976

High

1251216

WDR20
WD repeat-containing protein 20

7

20

Small-scale

0.969

High

232939

PHLP1
PH domain leucine-rich repeat-containing protein phosphatase 1

6

12

Small-scale

0.950

High

1251243

FANCI
Fanconi anemia group I protein

3

1

Small-scale

0.861

High

1251222

R51A1
RAD51-associated protein 1

7

0

Small-scale

0.717

High

1172961

PHLP2
PH domain leucine-rich repeat-containing protein phosphatase 2

5

5

Small-scale

0.716

High

997660

DMWD
Dystrophia myotonica WD repeat-containing protein

1

19

High-throughput

0.665

High

1048875

BOP1
Ribosome biogenesis protein BOP1

1

20

High-throughput

0.665

High

1251244

WDR70
WD repeat-containing protein 70

1

16

High-throughput

0.665

High

1251245

NHP2
H/ACA ribonucleoprotein complex subunit 2

1

10

High-throughput

0.665

High

1251229

ATAD5
ATPase family AAA domain-containing protein 5

3

9

Small-scale

0.640

High

1157343

JMJD6
Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6

2

5

High-throughput

0.628

High

1168522

RN19B
E3 ubiquitin-protein ligase RNF19B

2

14

High-throughput

0.628

High

1237365

TSYL6
Testis-specific Y-encoded-like protein 6

2

2

High-throughput

0.628

High

1251253

VSIG4
V-set and immunoglobulin domain-containing protein 4

1

4

High-throughput

0.618

High

151098

DVL2
Segment polarity protein dishevelled homolog DVL-2

1

5

High-throughput

0.618

High

1146642

A16L1
Autophagy-related protein 16-1

1

20

High-throughput

0.618

High

1170912

TRI67
Tripartite motif-containing protein 67

1

15

High-throughput

0.618

High

1251220

DCAF4
DDB1- and CUL4-associated factor 4

1

1

High-throughput

0.618

High

1251237

PKHA4
Pleckstrin homology domain-containing family A member 4

1

20

High-throughput

0.618

High

885447

VSX2
Visual system homeobox 2

2

3

High-throughput

0.611

High

304254

UBR5
E3 ubiquitin-protein ligase UBR5

2

9

Small-scale

0.601

High

387151

P53
Cellular tumor antigen p53

2

5

High-throughput

0.601

High

1251231

NEB2
Neurabin-2

2

6

High-throughput

0.601

High

476083

UBC
Polyubiquitin-C [Cleaved into: Ubiquitin]

2

17

Small-scale

0.585

High

1251219

IGDC4
Immunoglobulin superfamily DCC subclass member 4

1

0

High-throughput

0.578

High

1251239

NMRL1
NmrA-like family domain-containing protein 1

1

1

High-throughput

0.561

High

1173191

PAXI1
PAX-interacting protein 1

1

15

High-throughput

0.552

High

254618

CLAP2
CLIP-associating protein 2

1

4

High-throughput

0.536

High

470100

H2AZ
Histone H2A.Z

1

9

High-throughput

0.536

High

801258

KI67
Proliferation marker protein Ki-67

1

16

High-throughput

0.536

High

842966

TCPQ
T-complex protein 1 subunit theta

1

20

High-throughput

0.536

High

853662

IMA5
Importin subunit alpha-5

1

7

High-throughput

0.536

High

901706

PFD3
Prefoldin subunit 3

1

5

High-throughput

0.536

High

943366

TCPB
T-complex protein 1 subunit beta

1

20

High-throughput

0.536

High

1047889

CIRBP
Cold-inducible RNA-binding protein

1

15

High-throughput

0.536

High

1060838

IMB1
Importin subunit beta-1

1

8

High-throughput

0.536

High

1087278

H2B2E
Histone H2B type 2-E

1

8

High-throughput

0.536

High

1136828

FAXC
Failed axon connections homolog

1

1

High-throughput

0.536

High

1193074

CENPV
Centromere protein V

1

2

High-throughput

0.536

High

1251218

DDX54
ATP-dependent RNA helicase DDX54

1

19

High-throughput

0.536

High

1251233

SPSB2
SPRY domain-containing SOCS box protein 2

1

16

High-throughput

0.536

High

1251240

GPBL1
Vasculin-like protein 1

1

1

High-throughput

0.536

High

1251255

NOP16
Nucleolar protein 16

1

2

High-throughput

0.536

High

1251256

USH1C
Harmonin

1

5

High-throughput

0.536

High

147535

SOCS6
Suppressor of cytokine signaling 6

1

5

High-throughput

0.515

High

164140

ARHGA
Rho guanine nucleotide exchange factor 10

1

16

High-throughput

0.515

High

177064

EIF3H
Eukaryotic translation initiation factor 3 subunit H

1

11

High-throughput

0.515

High

216554

SAHH2
S-adenosylhomocysteine hydrolase-like protein 1

1

6

High-throughput

0.515

High

239179

CTND1
Catenin delta-1

1

15

High-throughput

0.515

High

242516

DKC1
H/ACA ribonucleoprotein complex subunit DKC1

1

5

High-throughput

0.515

High

256978

KDM4A
Lysine-specific demethylase 4A

1

8

High-throughput

0.515

High

270679

MYCB2
E3 ubiquitin-protein ligase MYCBP2

1

11

High-throughput

0.515

High

274436

CRTAP
Cartilage-associated protein

1

1

High-throughput

0.515

High

506625

BCR
Breakpoint cluster region protein

1

11

High-throughput

0.515

High

586874

CSK22
Casein kinase II subunit alpha'

1

16

High-throughput

0.515

High

614392

PPIB
Peptidyl-prolyl cis-trans isomerase B

1

4

High-throughput

0.515

High

738860

RPB9
DNA-directed RNA polymerase II subunit RPB9

1

1

High-throughput

0.515

High

833012

YLPM1
YLP motif-containing protein 1

1

10

High-throughput

0.515

High

898973

PSME3
Proteasome activator complex subunit 3

1

3

High-throughput

0.515

High

913923

RPB7
DNA-directed RNA polymerase II subunit RPB7

1

1

High-throughput

0.515

High

931753

CSK2B
Casein kinase II subunit beta

1

2

High-throughput

0.515

High

934330

CSK21
Casein kinase II subunit alpha

1

20

High-throughput

0.515

High

963861

SET
Protein SET

1

2

High-throughput

0.515

High

1034098

TCOF
Treacle protein

1

18

High-throughput

0.515

High

1043465

CUL4B
Cullin-4B

1

20

High-throughput

0.515

High

1049604

EIF3A
Eukaryotic translation initiation factor 3 subunit A

1

20

High-throughput

0.515

High

1050610

WRN
Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN

1

20

High-throughput

0.515

High

1079110

STK11
Serine/threonine-protein kinase STK11

1

8

High-throughput

0.515

High

1104067

P3H1
Prolyl 3-hydroxylase 1

1

1

High-throughput

0.515

High

1182933

SPT6H
Transcription elongation factor SPT6

1

5

High-throughput

0.515

High

1198039

KAISO
Transcriptional regulator Kaiso

1

2

High-throughput

0.515

High

1235565

ZBTB2
Zinc finger and BTB domain-containing protein 2

1

3

High-throughput

0.515

High

1251224

SAHH3
Adenosylhomocysteinase 3

1

6

High-throughput

0.515

High

1251225

NAF1
H/ACA ribonucleoprotein complex non-core subunit NAF1

1

1

High-throughput

0.515

High

1251232

IWS1
Protein IWS1 homolog

1

8

High-throughput

0.515

High

1251241

GPN1
GPN-loop GTPase 1

1

2

High-throughput

0.515

High

1251252

NEB1
Neurabin-1

1

4

High-throughput

0.515

High

1251254

AP3M1
AP-3 complex subunit mu-1

1

5

High-throughput

0.515

High

812747

MSS4
Guanine nucleotide exchange factor MSS4

1

0

High-throughput

0.513

High

1125670

SGO1
Shugoshin 1

1

0

High-throughput

0.513

High

1131702

DACT2
Dapper homolog 2

1

0

High-throughput

0.513

High

1251221

TR19L
Tumor necrosis factor receptor superfamily member 19L

1

0

High-throughput

0.513

High

1251238

PGES2
Prostaglandin E synthase 2

1

0

High-throughput

0.513

High

988108

RAD51
DNA repair protein RAD51 homolog 1

1

2

Small-scale

0.501

High

1251246

VSX1
Visual system homeobox 1

1

3

High-throughput

0.500

High

577773

NELFE
Negative elongation factor E

1

0

High-throughput

0.493

High

1033043

TARB1
Probable methyltransferase TARBP1

1

0

High-throughput

0.493

High

1161558

SHQ1
Protein SHQ1 homolog

1

0

High-throughput

0.493

High

1190343

TRM11
tRNA

1

0

High-throughput

0.493

High

1251230

UIMC1
BRCA1-A complex subunit RAP80

1

0

High-throughput

0.493

High

1251242

NOP10
H/ACA ribonucleoprotein complex subunit 3

1

0

High-throughput

0.493

High

1251249

ZN639
Zinc finger protein 639

1

0

High-throughput

0.493

High

1251251

PNMA2
Paraneoplastic antigen Ma2

1

2

High-throughput

0.489

High

517374

PCNA
Proliferating cell nuclear antigen

1

0

Small-scale

0.480

High

124907

EIF3F
Eukaryotic translation initiation factor 3 subunit F

1

6

High-throughput

0.479

High

155806

UN13B
Protein unc-13 homolog B

1

6

High-throughput

0.479

High

244683

BRD4
Bromodomain-containing protein 4

1

17

High-throughput

0.479

High

262291

ULK1
Serine/threonine-protein kinase ULK1

1

8

Small-scale

0.479

High

262516

TULP3
Tubby-related protein 3

1

1

High-throughput

0.479

High

300542

NFAT5
Nuclear factor of activated T-cells 5

1

9

Small-scale

0.479

High

317994

NFAC1
Nuclear factor of activated T-cells, cytoplasmic 1

1

11

High-throughput

0.479

High

322904

STAU1
Double-stranded RNA-binding protein Staufen homolog 1

1

17

High-throughput

0.479

High

347392

MYC
Myc proto-oncogene protein

1

20

Small-scale

0.479

High

385200

NTRK1
High affinity nerve growth factor receptor

1

14

High-throughput

0.479

High

487603

ANDR
Androgen receptor

1

20

Small-scale

0.479

High

631515

BRD2
Bromodomain-containing protein 2

1

19

High-throughput

0.479

High

637955

PSA3
Proteasome subunit alpha type-3

1

6

Small-scale

0.479

High

749698

BRCA1
Breast cancer type 1 susceptibility protein

1

12

High-throughput

0.479

High

779775

CCNF
Cyclin-F

1

8

High-throughput

0.479

High

1035258

NFAC2
Nuclear factor of activated T-cells, cytoplasmic 2

1

9

High-throughput

0.479

High

1038288

RIPK1
Receptor-interacting serine/threonine-protein kinase 1

1

10

Small-scale

0.479

High

1042090

CUL3
Cullin-3

1

20

Small-scale

0.479

High

1251226

DDRGK
DDRGK domain-containing protein 1

1

6

High-throughput

0.479

High

1251227

ITCH
E3 ubiquitin-protein ligase Itchy homolog

1

4

Small-scale

0.479

High

1251236

Q9H4D1
Protein kinase

1

9

High-throughput

0.479

High

1251247

TBK1
Serine/threonine-protein kinase TBK1

1

15

Small-scale

0.479

High

1251250

FBXL7
F-box/LRR-repeat protein 7

1

1

Small-scale

0.479

High

1188010

PBIR2
PABIR family member 2

1

1

High-throughput

0.470

High

1251248

GPN3
GPN-loop GTPase 3

1

2

High-throughput

0.470

High

780975

ID1
DNA-binding protein inhibitor ID-1

1

0

Small-scale

0.458

High

1191055

WAPL
Wings apart-like protein homolog

1

0

High-throughput

0.458

High

319932

HERC2
E3 ubiquitin-protein ligase HERC2

1

9

High-throughput

0.445

High

321137

PTBP3
Polypyrimidine tract-binding protein 3

1

13

High-throughput

0.445

High

883571

RIPK4
Receptor-interacting serine/threonine-protein kinase 4

1

11

High-throughput

0.445

High

1251235

MLP3B
Microtubule-associated proteins 1A/1B light chain 3B

1

4

High-throughput

0.445

High

69773

B1AM27
Unc-13 homolog B

1

6

High-throughput

0.437

High

72131

B3KSH1
Eukaryotic translation initiation factor 3 subunit F

1

6

High-throughput

0.437

High

100981

APRIO
Alternative prion protein

1

2

High-throughput

0.437

High

354514

HLAB
HLA class I histocompatibility antigen, B alpha chain

1

2

High-throughput

0.437

High

1224482

Q8IZK2
Breast and ovarian cancer susceptibility protein

1

6

High-throughput

0.437

High

1251217

HUMMR
Protein MGARP

1

0

High-throughput

0.279

Low

1251223

ASIC4
Acid-sensing ion channel 4

1

0

High-throughput

0.279

Low

1251228

OPALI
Opalin

1

0

High-throughput

0.279

Low

1251234

GORS1
Golgi reassembly-stacking protein 1

1

0

High-throughput

0.279

Low

119832

SMAP
Small acidic protein

1

0

High-throughput

0.269

Low


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Last updated: 15 Jul 2024