Protein: RS13
Small ribosomal subunit protein uS13 (30S ribosomal protein S13)

Gene: RS13, rpsM
Organism: Escherichia coli K-12
Interactions: 128
UniProt ID: P0A7S9

Gene Ontology (top 5):
GO:0000049 - tRNA binding
GO:0002181 - cytoplasmic translation
GO:0003735 - structural constituent of ribosome
GO:0005737 - cytoplasm
GO:0005829 - cytosol

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

461419

RLUC
Ribosomal large subunit pseudouridine synthase C

3

2

High-throughput

0.657

High

461417

CSPC
Cold shock-like protein CspC

2

5

High-throughput

0.612

High

461406

SYT
Threonine--tRNA ligase

2

2

High-throughput

0.588

High

461410

CSPD
Cold shock-like protein CspD

2

5

High-throughput

0.588

High

461420

RSUA
Ribosomal small subunit pseudouridine synthase A

2

2

High-throughput

0.588

High

461426

ALLR
HTH-type transcriptional repressor AllR

2

1

High-throughput

0.588

High

461445

ICLR
Transcriptional repressor IclR

2

1

High-throughput

0.588

High

461449

RNR
Ribonuclease R

2

1

High-throughput

0.588

High

461472

RLUB
Ribosomal large subunit pseudouridine synthase B

2

2

High-throughput

0.588

High

461482

RL4
Large ribosomal subunit protein uL4

2

1

High-throughput

0.588

High

415740

TOP1
DNA topoisomerase 1

2

0

High-throughput

0.585

High

343876

SYGA
Glycine--tRNA ligase alpha subunit

2

0

High-throughput

0.563

High

393722

PNP
Polyribonucleotide nucleotidyltransferase

2

0

High-throughput

0.563

High

457331

ACP
Acyl carrier protein

2

0

High-throughput

0.563

High

458675

FABA
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase

2

0

High-throughput

0.563

High

459579

KDSA
2-dehydro-3-deoxyphosphooctonate aldolase

2

0

High-throughput

0.563

High

459965

RPPH
RNA pyrophosphohydrolase

2

0

High-throughput

0.563

High

461403

UVRC
UvrABC system protein C

2

0

High-throughput

0.563

High

461413

RNG
Ribonuclease G

2

0

High-throughput

0.563

High

461414

PHOL
PhoH-like protein

2

0

High-throughput

0.563

High

461443

YFIF
Uncharacterized tRNA/rRNA methyltransferase YfiF

2

0

High-throughput

0.563

High

461485

NFI
Endonuclease V

2

0

High-throughput

0.563

High

461436

FKBX
FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase

2

0

High-throughput

0.547

High

357014

RS7
Small ribosomal subunit protein uS7

1

2

High-throughput

0.536

High

461396

RS3
Small ribosomal subunit protein uS3

1

2

High-throughput

0.536

High

461397

RS4
Small ribosomal subunit protein uS4

1

2

High-throughput

0.536

High

461411

CSPG
Cold shock-like protein CspG

1

5

High-throughput

0.536

High

461412

CSPI
Cold shock-like protein CspI

1

5

High-throughput

0.536

High

461418

RL13
Large ribosomal subunit protein uL13

1

1

High-throughput

0.536

High

461425

DBHB
DNA-binding protein HU-beta

1

1

High-throughput

0.536

High

461442

RL17
Large ribosomal subunit protein bL17

1

1

High-throughput

0.536

High

461450

LPXD
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase

1

3

High-throughput

0.536

High

461457

RECG
ATP-dependent DNA helicase RecG

1

3

High-throughput

0.536

High

461461

MFD
Transcription-repair-coupling factor

1

5

High-throughput

0.536

High

461470

CSPB
Cold shock-like protein CspB

1

5

High-throughput

0.536

High

461481

RL2
Large ribosomal subunit protein uL2

1

2

High-throughput

0.536

High

415801

ERA
GTPase Era

1

0

High-throughput

0.513

High

460465

RL11
Large ribosomal subunit protein uL11

1

0

High-throughput

0.513

High

461409

ALAA
Glutamate-pyruvate aminotransferase AlaA

1

0

High-throughput

0.513

High

461432

RLMM
Ribosomal RNA large subunit methyltransferase M

1

0

High-throughput

0.513

High

461434

UVRY
Response regulator UvrY

1

0

High-throughput

0.513

High

461439

PDXH
Pyridoxine/pyridoxamine 5'-phosphate oxidase

1

0

High-throughput

0.513

High

461447

UBIG
Ubiquinone biosynthesis O-methyltransferase

1

0

High-throughput

0.513

High

461451

ADD
Adenosine deaminase

1

0

High-throughput

0.513

High

461452

PSS
CDP-diacylglycerol--serine O-phosphatidyltransferase

1

0

High-throughput

0.513

High

461453

FMT
Methionyl-tRNA formyltransferase

1

0

High-throughput

0.513

High

461455

WAAC
Lipopolysaccharide heptosyltransferase 1

1

0

High-throughput

0.513

High

461458

FLIS
Flagellar secretion chaperone FliS

1

0

High-throughput

0.513

High

461465

YIIS
UPF0381 protein YiiS

1

0

High-throughput

0.513

High

461475

RSMC
Ribosomal RNA small subunit methyltransferase C

1

0

High-throughput

0.513

High

461480

USPC
Universal stress protein C

1

0

High-throughput

0.513

High

461491

NPD
NAD-dependent protein deacylase

1

0

High-throughput

0.513

High

461497

MTFA
Mlc titration factor A

1

0

High-throughput

0.513

High

461503

MAA
Maltose O-acetyltransferase

1

0

High-throughput

0.513

High

461496

DCYD
D-cysteine desulfhydrase

1

2

High-throughput

0.500

High

461462

AAS
Bifunctional protein Aas [Includes: 2-acylglycerophosphoethanolamine acyltransferase

1

1

High-throughput

0.489

High

442662

DNAJ
Chaperone protein DnaJ

1

5

High-throughput

0.484

High

458999

IHFB
Integration host factor subunit beta

1

1

High-throughput

0.484

High

461398

RS5
Small ribosomal subunit protein uS5

1

5

High-throughput

0.484

High

461408

RPOC
DNA-directed RNA polymerase subunit beta'

1

2

High-throughput

0.484

High

461415

DEAD
ATP-dependent RNA helicase DeaD

1

5

High-throughput

0.484

High

461467

CBPA
Curved DNA-binding protein

1

2

High-throughput

0.484

High

461454

MAK
Fructokinase

1

0

High-throughput

0.479

High

461484

YQJI
Transcriptional regulator YqjI

1

0

High-throughput

0.479

High

461500

HLDE
Bifunctional protein HldE [Includes: D-beta-D-heptose 7-phosphate kinase

1

0

High-throughput

0.479

High

461405

RHLB
ATP-dependent RNA helicase RhlB

1

3

High-throughput

0.479

High

461430

KPYK1
Pyruvate kinase I

1

1

High-throughput

0.479

High

461448

PARE
DNA topoisomerase 4 subunit B

1

1

High-throughput

0.479

High

368559

DNAA
Chromosomal replication initiator protein DnaA

1

0

High-throughput

0.464

High

458744

FIS
DNA-binding protein Fis

1

0

High-throughput

0.464

High

458903

HFQ
RNA-binding protein Hfq

1

0

High-throughput

0.464

High

459521

IF3
Translation initiation factor IF-3 [Cleaved into: Translation initiation factor IF-3, N-terminally processed; Translation initiation factor IF-3S]

1

0

High-throughput

0.464

High

460170

HSLV
ATP-dependent protease subunit HslV

1

0

High-throughput

0.464

High

461399

RNPA
Ribonuclease P protein component

1

0

High-throughput

0.464

High

461400

RPOA
DNA-directed RNA polymerase subunit alpha

1

0

High-throughput

0.464

High

461401

RPOZ
DNA-directed RNA polymerase subunit omega

1

0

High-throughput

0.464

High

461416

ULAR
HTH-type transcriptional regulator UlaR

1

0

High-throughput

0.464

High

461437

SKP
Chaperone protein Skp

1

0

High-throughput

0.464

High

461474

RSGA
Small ribosomal subunit biogenesis GTPase RsgA

1

0

High-throughput

0.464

High

429388

FDHF
Formate dehydrogenase H

1

0

High-throughput

0.458

High

461407

YEEX
UPF0265 protein YeeX

1

0

High-throughput

0.458

High

461424

DPS
DNA protection during starvation protein

1

0

High-throughput

0.458

High

461431

YGAM
Uncharacterized protein YgaM

1

0

High-throughput

0.458

High

461438

RIDA
2-iminobutanoate/2-iminopropanoate deaminase

1

0

High-throughput

0.458

High

461466

YJAG
Uncharacterized protein YjaG

1

0

High-throughput

0.458

High

461469

RLMN
Dual-specificity RNA methyltransferase RlmN

1

0

High-throughput

0.458

High

461483

GMHBB
D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase

1

0

High-throughput

0.458

High

461486

CSRA
Carbon storage regulator

1

0

High-throughput

0.458

High

461489

RLMF
Ribosomal RNA large subunit methyltransferase F

1

0

High-throughput

0.458

High

461478

HRPA
ATP-dependent RNA helicase HrpA

1

1

High-throughput

0.442

High

461423

ATPG
ATP synthase gamma chain

1

1

High-throughput

0.437

High

461499

LYSAC
Peptidyl-lysine N-acetyltransferase PatZ

2

0

High-throughput

0.313

High

461490

YBJX
Uncharacterized protein YbjX

2

0

High-throughput

0.307

High

457196

YIDB
Uncharacterized protein YidB

1

0

High-throughput

0.279

Low

461421

WZB
Low molecular weight protein-tyrosine-phosphatase Wzb

1

0

High-throughput

0.279

Low

461422

YCBK
Uncharacterized protein YcbK

1

0

High-throughput

0.279

Low

461427

RUTR
HTH-type transcriptional regulator RutR

1

0

High-throughput

0.279

Low

461428

YDIE
Uncharacterized protein YdiE

1

0

High-throughput

0.279

Low

461429

YECA
Uncharacterized protein YecA

1

0

High-throughput

0.279

Low

461435

DMA
DNA adenine methylase

1

0

High-throughput

0.279

Low

461441

RELA
GTP pyrophosphokinase

1

0

High-throughput

0.279

Low

461446

MUTY
Adenine DNA glycosylase

1

0

High-throughput

0.279

Low

461456

LPXM
Lipid A biosynthesis myristoyltransferase

1

0

High-throughput

0.279

Low

461459

INAA
Protein InaA

1

0

High-throughput

0.279

Low

461460

NARQ
Nitrate/nitrite sensor protein NarQ

1

0

High-throughput

0.279

Low

461463

CBRC
UPF0167 protein CbrC

1

0

High-throughput

0.279

Low

461473

USPF
Universal stress protein F

1

0

High-throughput

0.279

Low

461476

YJJU
Uncharacterized protein YjjU

1

0

High-throughput

0.279

Low

461477

GARD
Galactarate dehydratase

1

0

High-throughput

0.279

Low

461487

WCAC
Putative colanic acid biosynthesis glycosyl transferase WcaC

1

0

High-throughput

0.279

Low

461488

WCAK
Colanic acid biosynthesis protein WcaK

1

0

High-throughput

0.279

Low

461492

BLUR
HTH-type transcriptional repressor BluR

1

0

High-throughput

0.279

Low

461493

RACR
Prophage repressor RacR

1

0

High-throughput

0.279

Low

461494

YNEG
Uncharacterized protein YneG

1

0

High-throughput

0.279

Low

461495

YOBB
Uncharacterized protein YobB

1

0

High-throughput

0.279

Low

461502

YFCH
Epimerase family protein YfcH

1

0

High-throughput

0.279

Low

461433

YGGE
Uncharacterized protein YggE

1

0

High-throughput

0.261

Low

461498

YFFL
Uncharacterized protein YffL

1

0

High-throughput

0.261

Low

461402

YACL
UPF0231 protein YacL

1

0

High-throughput

0.253

Low

461404

TRMB
tRNA

1

0

High-throughput

0.253

Low

461444

RCSA
Transcriptional regulatory protein RcsA

1

0

High-throughput

0.253

Low

367361

PBPA
Penicillin-binding protein 1A

1

0

High-throughput

0.249

Low

461440

SOHB
Probable protease SohB

1

0

High-throughput

0.249

Low

461468

YADG
Uncharacterized ABC transporter ATP-binding protein YadG

1

0

High-throughput

0.249

Low

461471

WBBK
Putative glycosyltransferase WbbK

1

0

High-throughput

0.249

Low

461479

KDSD
Arabinose 5-phosphate isomerase KdsD

1

0

High-throughput

0.249

Low

461501

GTRB
Prophage bactoprenol glucosyl transferase homolog

1

0

High-throughput

0.249

Low

461464

INTA
Prophage integrase IntA

1

0

High-throughput

0.232

Low


Service provided by Combinatics, Japan

Last updated: 15 Jul 2024