Protein: RIM1
Single-stranded DNA-binding protein RIM1, mitochondrial (Mitochondrial ssDNA-binding protein)

Gene: RIM1
Organism: Saccharomyces cerevisiae S288C
Interactions: 117
UniProt ID: P32445

Gene Ontology (top 5):
GO:0000002 - mitochondrial genome maintenance
GO:0003697 - single-stranded DNA binding
GO:0005739 - mitochondrion
GO:0006264 - mitochondrial DNA replication
GO:0042645 - mitochondrial nucleoid

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

689768

RIM1
Single-stranded DNA-binding protein RIM1, mitochondrial

2

2

Small-scale

0.755

High

689773

MG101
Mitochondrial genome maintenance protein MGM101

3

0

High-throughput

0.628

High

689811

BRE5
UBP3-associated protein BRE5

2

0

High-throughput

0.595

High

689837

FMP45
SUR7 family protein FMP45

2

0

High-throughput

0.587

High

425414

PIF1
ATP-dependent DNA helicase PIF1

2

1

Small-scale

0.584

High

689776

HSP78
Heat shock protein 78, mitochondrial

2

1

High-throughput

0.571

High

615129

BUR1
Serine/threonine-protein kinase BUR1

2

1

High-throughput

0.567

High

689824

MSH6
DNA mismatch repair protein MSH6

2

2

High-throughput

0.567

High

478003

HSP77
Import motor subunit, mitochondrial

2

0

High-throughput

0.559

High

607228

RFA1
Replication factor A protein 1

2

0

Small-scale

0.559

High

392346

H2A2
Histone H2A.2

2

1

High-throughput

0.549

High

419604

RAD52
DNA repair and recombination protein RAD52

1

1

High-throughput

0.536

High

500305

GPA2
Guanine nucleotide-binding protein alpha-2 subunit

1

0

High-throughput

0.518

High

689823

TCB3
Tricalbin-3

1

0

High-throughput

0.518

High

689833

MHR1
Large ribosomal subunit protein mL67

1

0

High-throughput

0.518

High

689840

MDM32
Mitochondrial distribution and morphology protein 32

1

0

High-throughput

0.518

High

689798

MMM1
Maintenance of mitochondrial morphology protein 1

1

0

Small-scale

0.513

High

689807

MDM34
Mitochondrial distribution and morphology protein 34

1

0

Small-scale

0.513

High

689819

UBP3
Ubiquitin carboxyl-terminal hydrolase 3

1

0

High-throughput

0.513

High

409965

NOT3
General negative regulator of transcription subunit 3

1

1

High-throughput

0.494

High

689842

TPO4
Polyamine transporter 4

1

1

High-throughput

0.494

High

689844

NOT5
General negative regulator of transcription subunit 5

1

1

High-throughput

0.494

High

612162

APN1
Apurinic-apyrimidinic endonuclease 1

1

0

High-throughput

0.493

High

689841

LSP1
Sphingolipid long chain base-responsive protein LSP1

1

0

High-throughput

0.493

High

689779

MDJ1
DnaJ homolog 1, mitochondrial

1

1

High-throughput

0.479

High

345259

STF1
F(1)-ATPase inhibitor STF1, mitochondrial

1

0

High-throughput

0.458

High

375317

RPB1
DNA-directed RNA polymerase II subunit RPB1

1

0

High-throughput

0.458

High

427205

ILVB
Acetolactate synthase catalytic subunit, mitochondrial

1

0

High-throughput

0.458

High

550165

DPOG
DNA polymerase gamma

1

0

High-throughput

0.458

High

558591

ODPA
Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial

1

0

High-throughput

0.458

High

602432

IDHP
Isocitrate dehydrogenase [NADP], mitochondrial

1

0

High-throughput

0.458

High

612932

AIM17
Probable oxidoreductase AIM17

1

0

High-throughput

0.458

High

630781

STDH
Catabolic L-serine/threonine dehydratase [Includes: L-serine dehydratase

1

0

High-throughput

0.458

High

634988

ILV6
Acetolactate synthase small subunit, mitochondrial

1

0

High-throughput

0.458

High

635341

IMG1
Large ribosomal subunit protein bL19m

1

0

High-throughput

0.458

High

650211

COQ3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial

1

0

High-throughput

0.458

High

689772

PT127
Putative mitochondrial translation system component PET127

1

0

High-throughput

0.458

High

689775

TIM23
Mitochondrial import inner membrane translocase subunit TIM23

1

0

High-throughput

0.458

High

689783

RM38
Large ribosomal subunit protein uL14m

1

0

High-throughput

0.458

High

689785

MIC60
MICOS complex subunit MIC60

1

0

High-throughput

0.458

High

689797

COQ7
5-demethoxyubiquinone hydroxylase, mitochondrial

1

0

High-throughput

0.458

High

689799

ETFB
Probable electron transfer flavoprotein subunit beta

1

0

High-throughput

0.458

High

689814

GIS2
Zinc finger protein GIS2

1

0

High-throughput

0.458

High

689816

SAM50
Sorting assembly machinery 50 kDa subunit

1

0

High-throughput

0.458

High

689820

GLRX5
Monothiol glutaredoxin-5, mitochondrial

1

0

High-throughput

0.458

High

689827

COX20
Cytochrome c oxidase assembly protein COX20, mitochondrial

1

0

High-throughput

0.458

High

689835

RM35
Large ribosomal subunit protein mL38

1

0

Small-scale

0.458

High

355394

H2B1
Histone H2B.1

1

1

High-throughput

0.437

High

355825

H2B2
Histone H2B.2

1

1

High-throughput

0.437

High

392081

H2A1
Histone H2A.1

1

1

High-throughput

0.437

High

629325

MSH3
DNA mismatch repair protein MSH3

1

2

High-throughput

0.437

High

639254

MSH2
DNA mismatch repair protein MSH2

1

2

High-throughput

0.437

High

680519

HS104
Heat shock protein 104

1

1

Small-scale

0.437

High

689809

TPO2
Polyamine transporter 2

1

1

High-throughput

0.417

High

510595

SSB1
Ribosome-associated molecular chaperone SSB1

1

1

High-throughput

0.407

High

689771

HSP7F
Heat shock protein homolog SSE1

1

1

High-throughput

0.407

High

689792

SSB2
Ribosome-associated molecular chaperone SSB2

1

1

High-throughput

0.407

High

689795

MPH1
ATP-dependent DNA helicase MPH1

3

0

Small-scale

0.334

High

678734

RAD16
DNA repair protein RAD16

2

0

High-throughput

0.324

High

689781

DEF1
RNA polymerase II degradation factor 1

2

0

High-throughput

0.320

High

689818

H3
Histone H3

2

0

High-throughput

0.313

High

689843

CMR1
DNA damage-binding protein CMR1

2

0

High-throughput

0.305

High

689826

RNH1
Ribonuclease H

2

0

High-throughput

0.298

High

587233

HNM1
Choline transport protein

1

0

High-throughput

0.282

High

636116

NOT1
General negative regulator of transcription subunit 1

1

0

High-throughput

0.282

High

689770

PUB1
Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1

1

0

High-throughput

0.282

High

689777

WHI3
Protein WHI3

1

0

High-throughput

0.282

High

689780

RPC8
DNA-directed RNA polymerase III subunit RPC8

1

0

High-throughput

0.282

High

689782

SFK1
Protein SFK1

1

0

High-throughput

0.282

High

689784

MID2
Cell wall integrity sensor MID2

1

0

High-throughput

0.282

High

689788

POP2
Poly(A) ribonuclease POP2

1

0

High-throughput

0.282

High

689791

LSM4
U6 snRNA-associated Sm-like protein LSm4

1

0

High-throughput

0.282

High

689800

SCD6
Protein SCD6

1

0

High-throughput

0.282

High

689803

BUL1
Ubiquitin ligase-binding protein BUL1

1

0

High-throughput

0.282

High

689806

MUP1
High-affinity methionine permease

1

0

High-throughput

0.282

High

689808

YG3A
Uncharacterized protein YGR130C

1

0

High-throughput

0.282

High

689812

YRF16
Y' element ATP-dependent helicase protein 1 copy 6

1

0

High-throughput

0.282

High

689813

CAF40
Protein CAF40

1

0

High-throughput

0.282

High

689821

PDR12
ATP-dependent permease PDR12

1

0

High-throughput

0.282

High

689828

PEX10
Peroxisome biogenesis factor 10

1

0

High-throughput

0.282

High

689830

YL326
Uncharacterized membrane protein YLR326W

1

0

High-throughput

0.282

High

689836

YL413
Cell membrane protein YLR413W

1

0

High-throughput

0.282

High

630068

SNT1
Probable DNA-binding protein SNT1

1

0

High-throughput

0.279

Low

689794

SEC24
Protein transport protein SEC24

1

0

High-throughput

0.279

Low

689804

CLA4
Serine/threonine-protein kinase CLA4

1

0

High-throughput

0.279

Low

689769

SPT16
FACT complex subunit SPT16

1

0

High-throughput

0.269

Low

689786

APN2
DNA-(apurinic or apyrimidinic site) endonuclease 2

1

0

High-throughput

0.269

Low

689787

DNA2
DNA replication ATP-dependent helicase/nuclease DNA2 [Includes: DNA replication nuclease DNA2

1

0

High-throughput

0.269

Low

689789

SAW1
Single-strand annealing weakened protein 1

1

0

High-throughput

0.269

Low

689793

6P21
6-phosphofructo-2-kinase 1

1

0

High-throughput

0.269

Low

689801

SPC1
Signal peptidase complex subunit 1

1

0

High-throughput

0.269

Low

689829

BUR2
Protein BUR2

1

0

High-throughput

0.269

Low

689838

RTC1
Restriction of telomere capping protein 1

1

0

High-throughput

0.261

Low

689778

TOR1
Serine/threonine-protein kinase TOR1

1

0

High-throughput

0.251

Low

689796

AZF1
Transcription factor AZF1

1

0

Small-scale

0.251

Low

339510

CDK1
Cyclin-dependent kinase 1

1

0

High-throughput

0.249

Low

356322

H4
Histone H4

1

0

High-throughput

0.249

Low

604951

XRN1
5'-3' exoribonuclease 1

1

0

High-throughput

0.249

Low

606580

RPC2
DNA-directed RNA polymerase III subunit RPC2

1

0

High-throughput

0.249

Low

638678

SPB4
ATP-dependent rRNA helicase SPB4

1

0

High-throughput

0.249

Low

661615

TF2B
Transcription initiation factor IIB

1

0

High-throughput

0.249

Low

689774

GSP1
GTP-binding nuclear protein GSP1/CNR1

1

0

High-throughput

0.249

Low

689790

RT105
Regulator of Ty1 transposition protein 105

1

0

Small-scale

0.249

Low

689802

MOG1
Nuclear import protein MOG1

1

0

High-throughput

0.249

Low

689805

VATG
V-type proton ATPase subunit G

1

0

High-throughput

0.249

Low

689815

IGO1
mRNA stability protein IGO1

1

0

Small-scale

0.249

Low

689817

ORC1
Origin recognition complex subunit 1

1

0

High-throughput

0.249

Low

689822

TOM1
E3 ubiquitin-protein ligase TOM1

1

0

High-throughput

0.249

Low

689825

SIZ1
E3 SUMO-protein ligase SIZ1

1

0

High-throughput

0.249

Low

689832

TFC6
Transcription factor tau 91 kDa subunit

1

0

High-throughput

0.249

Low

689839

SGO1
Shugoshin

1

0

High-throughput

0.249

Low

490627

HSP71
Heat shock protein SSA1

1

0

High-throughput

0.232

Low

633035

MAS5
Mitochondrial protein import protein MAS5

1

0

High-throughput

0.232

Low

689810

RT102
Regulator of Ty1 transposition protein 102

1

0

High-throughput

0.232

Low

689831

YL455
PWWP domain-containing protein YLR455W

1

0

Small-scale

0.232

Low

689834

RSC3
Chromatin structure-remodeling complex protein RSC3

1

0

High-throughput

0.232

Low


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Last updated: 15 Jul 2024