Protein: YBJC
Zinc finger CCCH domain-containing protein C337.12

Gene: YBJC, SPBC337.12
Organism: Schizosaccharomyces pombe 972h-
Interactions: 173
UniProt ID: O74823

Gene Ontology (top 5):
GO:0000785 - chromatin
GO:0005634 - nucleus
GO:0008270 - zinc ion binding
GO:0016604 - nuclear body
GO:0033621 - nuclear mRNA surveillance of meiosis-specific transcripts

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

153875

PAB2
Polyadenylate-binding protein 2

4

20

Small-scale

0.874

High

268253

YHP4
Uncharacterized RNA-binding protein C902.04

2

1

Small-scale

0.754

High

150427

PRP46
Pre-mRNA-splicing factor prp5

1

5

High-throughput

0.618

High

152413

YEC8
Uncharacterized WD repeat-containing protein C25H1.08c

1

2

High-throughput

0.618

High

237783

SLT11
Pre-mRNA-splicing factor cwf5

1

8

High-throughput

0.618

High

267573

ERB1
Ribosome biogenesis protein erb1

1

2

High-throughput

0.618

High

267577

YOCE
Uncharacterized RNA-binding protein C4F6.14

1

18

High-throughput

0.618

High

268174

CWF17
Pre-mRNA-splicing factor cwf17

1

4

High-throughput

0.618

High

268189

GAR2
Protein gar2

1

12

High-throughput

0.618

High

268192

LAH1
La protein homolog

1

11

High-throughput

0.618

High

268196

RNP24
RNA-binding protein rnp24

1

18

High-throughput

0.618

High

268201

MLO3
mRNA export protein mlo3

1

10

High-throughput

0.618

High

268229

TCG1
Single-stranded TG1-3 DNA-binding protein

1

12

High-throughput

0.618

High

268232

NCBP2
Nuclear cap-binding protein subunit 2

1

20

Small-scale

0.618

High

268239

YBEG
Uncharacterized WD repeat-containing protein C17D11.16

1

1

High-throughput

0.618

High

268251

YTM1
Ribosome biogenesis protein ytm1

1

2

High-throughput

0.618

High

268271

SA145
Pre-mRNA-splicing factor sap145

1

1

High-throughput

0.618

High

268161

MMI1
RNA binding exosome specificity factor Mmi1

3

0

Small-scale

0.613

High

268275

YGR4
Uncharacterized RNA-binding protein C365.04c

1

0

High-throughput

0.586

High

151477

YE02
Uncharacterized helicase C17H9.02

2

2

Small-scale

0.584

High

268264

RED1
NURS complex subunit red1

2

2

Small-scale

0.584

High

153723

YFPE
Uncharacterized protein C7D4.14c

2

0

Small-scale

0.559

High

268167

PIR2
NURS complex subunit pir2

2

0

Small-scale

0.559

High

151154

NOP12
Nucleolar protein 12

1

19

High-throughput

0.553

High

268163

G3BP
Putative G3BP-like protein

1

8

High-throughput

0.553

High

268202

NRD1
Negative regulator of differentiation 1

1

10

High-throughput

0.553

High

268235

UTP7
Probable U3 small nucleolar RNA-associated protein 7

1

7

High-throughput

0.553

High

149402

DED1
ATP-dependent RNA helicase ded1

1

2

High-throughput

0.479

High

152465

OLA1
Obg-like ATPase 1

1

2

High-throughput

0.479

High

152476

RFC3
Replication factor C subunit 3

1

2

High-throughput

0.479

High

152527

PRP19
Pre-mRNA-processing factor 19

1

4

High-throughput

0.479

High

152637

SMD2
Small nuclear ribonucleoprotein Sm D2

1

2

High-throughput

0.479

High

153568

NOG2
Nucleolar GTP-binding protein 2

1

3

High-throughput

0.479

High

153643

NCBP1
Nuclear cap-binding protein subunit 1

1

2

Small-scale

0.479

High

153843

YB7A
Uncharacterized AAA domain-containing protein C16E9.10c

1

2

High-throughput

0.479

High

205790

YEK9
Uncharacterized protein C4F10.09c

1

1

High-throughput

0.479

High

205994

SMD1
Small nuclear ribonucleoprotein Sm D1

1

2

High-throughput

0.479

High

207093

LSM5
LSM complex subunit lsm5

1

2

High-throughput

0.479

High

207158

DEF1
RNA polymerase II degradation factor 1

1

2

High-throughput

0.479

High

237546

RRS1
Ribosome biogenesis regulatory protein homolog

1

4

High-throughput

0.479

High

237615

RUXF
Small nuclear ribonucleoprotein F

1

2

High-throughput

0.479

High

237769

YCO6
Putative nucleosome assembly protein C364.06

1

2

High-throughput

0.479

High

237963

DPO5
rDNA transcriptional regulator pol5

1

1

High-throughput

0.479

High

238244

PESC
Pescadillo homolog

1

1

High-throughput

0.479

High

267563

MAK5
ATP-dependent RNA helicase mak5

1

6

High-throughput

0.479

High

267892

CG1C
Cyclin pch1

1

1

High-throughput

0.479

High

268087

KRR1
KRR1 small subunit processome component homolog

1

2

High-throughput

0.479

High

268111

GRN1
GTPase grn1

1

3

High-throughput

0.479

High

268159

RRP45
Exosome complex component rrp45

1

1

High-throughput

0.479

High

268162

RUXG
Small nuclear ribonucleoprotein G

1

5

High-throughput

0.479

High

268164

NOP2
25S rRNA

1

1

High-throughput

0.479

High

268165

YH56
UPF0743 protein C215.06c

1

1

High-throughput

0.479

High

268166

SN114
Pre-mRNA-splicing factor cwf10

1

1

High-throughput

0.479

High

268170

RFC4
Replication factor C subunit 4

1

2

High-throughput

0.479

High

268171

NOP56
Nucleolar protein 56

1

2

High-throughput

0.479

High

268173

RPAC1
DNA-directed RNA polymerases I and III subunit RPAC1

1

1

High-throughput

0.479

High

268176

RUVB2
RuvB-like helicase 2

1

1

High-throughput

0.479

High

268179

H2A1
Histone H2A-alpha

1

4

High-throughput

0.479

High

268180

H2B1
Histone H2B-alpha

1

2

High-throughput

0.479

High

268181

H4
Histone H4

1

3

High-throughput

0.479

High

268186

BYR3
Cellular nucleic acid-binding protein homolog

1

4

High-throughput

0.479

High

268188

CSK2A
Casein kinase II subunit alpha

1

5

High-throughput

0.479

High

268193

NAT10
RNA cytidine acetyltransferase

1

1

High-throughput

0.479

High

268194

YDM6
Uncharacterized protein C57A7.06

1

3

High-throughput

0.479

High

268195

GAR1
H/ACA ribonucleoprotein complex subunit gar1

1

2

High-throughput

0.479

High

268205

KRI1
Protein kri1

1

3

High-throughput

0.479

High

268207

RENT1
ATP-dependent helicase upf1

1

6

High-throughput

0.479

High

268208

RFC2
Replication factor C subunit 2

1

2

High-throughput

0.479

High

268212

RHO1
GTP-binding protein rho1

1

2

High-throughput

0.479

High

268213

HAS1
ATP-dependent RNA helicase has1

1

9

High-throughput

0.479

High

268214

FAL1
ATP-dependent RNA helicase fal1

1

1

Small-scale

0.479

High

268216

RSMB
Small nuclear ribonucleoprotein-associated protein B

1

3

High-throughput

0.479

High

268219

PAP
Poly(A) polymerase pla1

1

4

Small-scale

0.479

High

268223

CDK9
Probable cyclin-dependent kinase 9

1

2

High-throughput

0.479

High

268225

RUVB1
RuvB-like helicase 1

1

1

High-throughput

0.479

High

268228

ASE1
Anaphase spindle elongation protein 1

1

2

High-throughput

0.479

High

268230

YL92
Uncharacterized protein C683.02c

1

4

High-throughput

0.479

High

268231

BRX1
Ribosome biogenesis protein brx1

1

13

High-throughput

0.479

High

268233

CDC48
Cell division cycle protein 48

1

2

High-throughput

0.479

High

268243

NHP2
H/ACA ribonucleoprotein complex subunit nhp2

1

3

High-throughput

0.479

High

268248

NOP58
Nucleolar protein 58

1

2

High-throughput

0.479

High

268252

BFR2
Protein bfr2

1

3

High-throughput

0.479

High

268260

MRT4
Ribosome assembly factor mrt4

1

2

High-throughput

0.479

High

268263

MAK16
Protein mak16

1

2

High-throughput

0.479

High

268265

PUF6
Pumilio homology domain family member 6

1

6

High-throughput

0.479

High

268266

NSA2
Ribosome biogenesis protein nsa2

1

2

High-throughput

0.479

High

268269

SMD3
Small nuclear ribonucleoprotein Sm D3

1

3

High-throughput

0.479

High

268270

RPF2
Ribosome production factor 2 homolog

1

3

High-throughput

0.479

High

268277

MEX67
mRNA export factor mex67

1

4

High-throughput

0.479

High

151686

EBP2
Probable rRNA-processing protein ebp2

1

0

High-throughput

0.458

High

151700

YE07
Uncharacterized protein C17H9.07

1

0

High-throughput

0.458

High

151891

RPAB5
DNA-directed RNA polymerases I, II, and III subunit RPABC5

1

0

High-throughput

0.458

High

152731

RPA49
DNA-directed RNA polymerase I subunit rpa49

1

0

High-throughput

0.458

High

205784

BUD22
Protein bud22

1

0

High-throughput

0.458

High

206933

OGA1
Ribosome-associated protein oga1

1

0

High-throughput

0.458

High

207181

RPA43
DNA-directed RNA polymerase I subunit rpa43

1

0

High-throughput

0.458

High

237601

YHX7
Protein PBDC1 homolog

1

0

High-throughput

0.458

High

268169

LNP
Endoplasmic reticulum junction formation protein lunapark

1

0

High-throughput

0.458

High

268177

MBF1
Multiprotein-bridging factor 1

1

0

High-throughput

0.458

High

268178

RPA12
DNA-directed RNA polymerase I subunit RPA12

1

0

High-throughput

0.458

High

268184

SPI1
GTP-binding nuclear protein spi1

1

0

High-throughput

0.458

High

268185

FBRL
rRNA 2'-O-methyltransferase fibrillarin

1

0

High-throughput

0.458

High

268187

DIS3
Exosome complex exonuclease dis3

1

0

High-throughput

0.458

High

268191

BUD4
Anillin-related medial ring protein mid1

1

0

High-throughput

0.458

High

268199

CDB4
Curved DNA-binding protein

1

0

High-throughput

0.458

High

268200

RPAB1
DNA-directed RNA polymerases I, II, and III subunit RPABC1

1

0

High-throughput

0.458

High

268203

RRP4
Exosome complex component rrp4

1

0

High-throughput

0.458

High

268206

TGS1
Trimethylguanosine synthase

1

0

High-throughput

0.458

High

268209

US108
U1 snRNP-associated protein usp108

1

0

High-throughput

0.458

High

268210

EFG1P
rRNA-processing protein efg1

1

0

High-throughput

0.458

High

268215

RRP6
Exosome complex exonuclease rrp6

1

0

High-throughput

0.458

High

268220

YDBI
Uncharacterized protein C22E12.18

1

0

High-throughput

0.458

High

268222

RPAB3
DNA-directed RNA polymerases I, II, and III subunit RPABC3

1

0

High-throughput

0.458

High

268227

SLX9
Ribosome biogenesis protein slx9

1

0

High-throughput

0.458

High

268250

RPA2
Probable DNA-directed RNA polymerase I subunit RPA2

1

0

High-throughput

0.458

High

268255

SPF27
Pre-mRNA-splicing factor cwf7

1

0

High-throughput

0.458

High

268256

MEP33
mRNA export protein 33

1

0

High-throughput

0.458

High

268258

RUXE
Small nuclear ribonucleoprotein E

1

0

High-throughput

0.458

High

268259

RPA34
DNA-directed RNA polymerase I subunit rpa34

1

0

High-throughput

0.458

High

268267

CWF18
Pre-mRNA-splicing factor cwf18

1

0

High-throughput

0.458

High

268276

NOP16
Nucleolar protein 16

1

0

High-throughput

0.458

High

150455

MS116
ATP-dependent RNA helicase mss116, mitochondrial

1

5

High-throughput

0.437

High

152485

CBF5
H/ACA ribonucleoprotein complex subunit cbf5

1

2

High-throughput

0.437

High

153448

YDD3
Brix domain-containing protein C1B9.03c

1

2

High-throughput

0.437

High

237805

VGL1
Vigilin 1

1

9

High-throughput

0.437

High

238035

YG65
Uncharacterized helicase C15C4.05

1

5

High-throughput

0.437

High

267927

SNU13
13 kDa ribonucleoprotein-associated protein

1

3

High-throughput

0.437

High

268157

RRP5
rRNA biogenesis protein rrp5

1

3

High-throughput

0.437

High

268158

UTP23
rRNA-processing protein utp23

1

2

High-throughput

0.437

High

268172

PHB2
Prohibitin-2

1

1

High-throughput

0.437

High

268175

NOG1
Probable nucleolar GTP-binding protein 1

1

5

High-throughput

0.437

High

268182

RPA1
DNA-directed RNA polymerase I subunit rpa1

1

1

High-throughput

0.437

High

268183

KIN1
Protein kinase kin1

1

1

High-throughput

0.437

High

268198

DHH1
Putative ATP-dependent RNA helicase ste13

1

2

High-throughput

0.437

High

268236

YLA3
Uncharacterized HTH La-type RNA-binding protein C1527.03

1

11

High-throughput

0.437

High

268237

ARC1
tRNA-aminoacylation cofactor arc1

1

1

High-throughput

0.437

High

268240

YNY5
LisH domain-containing protein C1711.05

1

2

High-throughput

0.437

High

268242

YKY4
Uncharacterized NOC2 family protein C1142.04

1

1

High-throughput

0.437

High

268244

PHB1
Prohibitin-1

1

1

High-throughput

0.437

High

268246

NOP10
H/ACA ribonucleoprotein complex subunit nop10

1

1

High-throughput

0.437

High

268249

YIW2
Uncharacterized helicase C694.02

1

2

High-throughput

0.437

High

268254

YHHB
HMG box-containing protein C28F2.11

1

3

High-throughput

0.437

High

268257

ATH1
Ataxin-2 homolog

1

3

High-throughput

0.437

High

268261

RL1DB
Putative ribosome biogenesis protein C8F11.04

1

5

High-throughput

0.437

High

268272

NOP53
Ribosome biogenesis protein NOP53

1

5

High-throughput

0.437

High

268273

OTU2
Ubiquitin thioesterase otu2

1

4

High-throughput

0.437

High

151367

SLT1
Protein slt1

1

0

High-throughput

0.249

Low

207031

YBPC
Uncharacterized protein C16H5.12c

1

0

High-throughput

0.249

Low

207302

YGWC
Probable transcriptional regulatory protein C8D2.12c

1

0

High-throughput

0.249

Low

237734

CIF1
Calnexin-independence factor 1

1

0

High-throughput

0.249

Low

238181

PPR2
Pentatricopeptide repeat-containing protein 2, mitochondrial

1

0

High-throughput

0.249

Low

238204

MHR1
Large ribosomal subunit protein mL67

1

0

High-throughput

0.249

Low

238254

RTPT
Small ribosomal subunit protein mS26

1

0

High-throughput

0.249

Low

268040

CWF14
Pre-mRNA-splicing factor cwf14

1

0

High-throughput

0.249

Low

268160

YJB6
Uncharacterized protein C553.06

1

0

High-throughput

0.249

Low

268168

YG0C
Uncharacterized protein C1604.12

1

0

High-throughput

0.249

Low

268190

RTN1
Reticulon-like protein 1

1

0

High-throughput

0.249

Low

268197

RPAC2
DNA-directed RNA polymerases I and III subunit RPAC2

1

0

High-throughput

0.249

Low

268204

MRP20
Large ribosomal subunit protein uL23m

1

0

High-throughput

0.249

Low

268211

YAG7
Uncharacterized protein C12G12.07c

1

0

High-throughput

0.249

Low

268217

DBP3
ATP-dependent RNA helicase dbp3

1

0

High-throughput

0.249

Low

268218

UPF3
Nonsense-mediated mRNA decay protein 3

1

0

High-throughput

0.249

Low

268221

2ABA
Protein phosphatase PP2A regulatory subunit B

1

0

High-throughput

0.249

Low

268224

YNH5
UPF0642 protein C32H8.05

1

0

High-throughput

0.249

Low

268226

YKM7
Uncharacterized protein PB24D3.07c

1

0

High-throughput

0.249

Low

268234

YLI2
Uncharacterized protein C458.02c

1

0

High-throughput

0.249

Low

268238

YOH7
Uncharacterized protein C13E7.07

1

0

High-throughput

0.249

Low

268241

YOFI
Uncharacterized protein P4H10.18c

1

0

High-throughput

0.249

Low

268245

YJN4
Uncharacterized protein C24B10.04

1

0

High-throughput

0.249

Low

268247

RPA14
DNA-directed RNA polymerase I subunit rpa14

1

0

High-throughput

0.249

Low

268262

RRP15
Ribosomal RNA-processing protein 15

1

0

High-throughput

0.249

Low

268268

PAL1
Protein pal1

1

0

High-throughput

0.249

Low

268274

MUG72
Meiotically up-regulated gene 72 protein

1

0

High-throughput

0.249

Low


Service provided by Combinatics, Japan

Last updated: 11Aug2025