Protein: RS16B
Small ribosomal subunit protein uS9B (40S ribosomal protein S16-B) (RP61R)

Gene: RS16B, RPS16B
Organism: Saccharomyces cerevisiae S288C
Interactions: 147
UniProt ID: P0CX52

Gene Ontology (top 5):
GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003723 - RNA binding
GO:0003735 - structural constituent of ribosome
GO:0005829 - cytosol
GO:0006412 - translation

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

481742

PWP2
Periodic tryptophan protein 2

3

6

Small-scale

0.827

High

481764

GBLP
Small ribosomal subunit protein RACK1

3

8

Small-scale

0.827

High

481784

RIO2
Serine/threonine-protein kinase RIO2

3

5

Small-scale

0.827

High

425696

RS19A
Small ribosomal subunit protein eS19A

2

3

High-throughput

0.754

High

481769

RS20
Small ribosomal subunit protein uS10

2

2

High-throughput

0.754

High

481763

RPF2
Ribosome biogenesis protein RPF2

2

1

High-throughput

0.694

High

426251

RS19B
Small ribosomal subunit protein eS19B

1

3

High-throughput

0.618

High

481745

RS5
Small ribosomal subunit protein uS7

1

5

High-throughput

0.618

High

481838

RIO1
Serine/threonine-protein kinase RIO1

1

5

High-throughput

0.618

High

481767

ENP1
Essential nuclear protein 1

3

1

High-throughput

0.585

High

141093

RS9A
Small ribosomal subunit protein uS4A

2

3

High-throughput

0.584

High

357820

RS17A
Small ribosomal subunit protein eS17A

2

2

High-throughput

0.584

High

406695

RS3
Small ribosomal subunit protein uS3

2

2

High-throughput

0.584

High

407659

RS13
Small ribosomal subunit protein uS15

2

1

High-throughput

0.584

High

413241

RS14A
Small ribosomal subunit protein uS11A

2

2

High-throughput

0.584

High

470793

RS22A
Small ribosomal subunit protein uS8A

2

1

High-throughput

0.584

High

479858

RS6A
Small ribosomal subunit protein eS6A

2

2

High-throughput

0.584

High

480415

RS8A
Small ribosomal subunit protein eS8A

2

2

High-throughput

0.584

High

481727

RS18A
Small ribosomal subunit protein uS13A

2

2

High-throughput

0.584

High

481738

RS2
Small ribosomal subunit protein uS5

2

4

High-throughput

0.584

High

481747

RS7A
Small ribosomal subunit protein eS7A

2

2

High-throughput

0.584

High

481754

RSSA1
Small ribosomal subunit protein uS2A

2

6

High-throughput

0.584

High

481756

RS3A1
Small ribosomal subunit protein eS1A

2

3

High-throughput

0.584

High

481758

RS27A
Small ribosomal subunit protein eS27A

2

2

High-throughput

0.584

High

481792

RPN11
Ubiquitin carboxyl-terminal hydrolase RPN11

2

2

High-throughput

0.584

High

481816

RS15
Small ribosomal subunit protein uS19

2

2

High-throughput

0.584

High

481823

DHR1
Probable ATP-dependent RNA helicase DHR1

2

7

High-throughput

0.584

High

481830

RS10A
Small ribosomal subunit protein eS10A

2

2

High-throughput

0.584

High

481726

RS16B
Small ribosomal subunit protein uS9B

2

0

High-throughput

0.559

High

481757

LTV1
Protein LTV1

2

0

High-throughput

0.559

High

481775

RPN10
26S proteasome regulatory subunit RPN10

2

0

Small-scale

0.559

High

481796

RS12
Small ribosomal subunit protein eS12

2

0

High-throughput

0.559

High

481739

GID7
Glucose-induced degradation protein 7

1

8

High-throughput

0.553

High

481774

RPF1
Ribosome production factor 1

1

1

High-throughput

0.514

High

481768

KSP1
Serine/threonine-protein kinase KSP1

1

1

High-throughput

0.501

High

481737

SIS1
Protein SIS1

1

0

High-throughput

0.493

High

481749

XPO1
Exportin-1

1

1

High-throughput

0.489

High

357173

RMAR
Small ribosomal subunit protein uS3m

1

1

High-throughput

0.479

High

365649

HSP82
ATP-dependent molecular chaperone HSP82

1

1

High-throughput

0.479

High

382886

RL25
Large ribosomal subunit protein uL23

1

1

High-throughput

0.479

High

405363

RL26A
Large ribosomal subunit protein uL24A

1

3

High-throughput

0.479

High

407460

RS9B
Small ribosomal subunit protein uS4B

1

3

High-throughput

0.479

High

408241

RS31
Ubiquitin-ribosomal protein eS31 fusion protein [Cleaved into: Ubiquitin; Small ribosomal subunit protein eS31

1

3

High-throughput

0.479

High

410274

SC160
Protein SCP160

1

7

High-throughput

0.479

High

450369

C1TM
C-1-tetrahydrofolate synthase, mitochondrial

1

2

High-throughput

0.479

High

470640

RS25B
Small ribosomal subunit protein eS25B

1

2

High-throughput

0.479

High

470716

RS21A
Small ribosomal subunit protein eS21A

1

2

High-throughput

0.479

High

471469

RS28B
Small ribosomal subunit protein eS28B

1

2

High-throughput

0.479

High

471957

RL31A
Large ribosomal subunit protein eL31A

1

1

High-throughput

0.479

High

479304

RS23B
Small ribosomal subunit protein uS12B

1

4

High-throughput

0.479

High

479398

RS24A
Small ribosomal subunit protein eS24A

1

1

High-throughput

0.479

High

479569

RS30A
Small ribosomal subunit protein eS30A

1

2

High-throughput

0.479

High

479668

RS4A
Small ribosomal subunit protein eS4A

1

2

High-throughput

0.479

High

481459

RS11B
Small ribosomal subunit protein uS17B

1

3

High-throughput

0.479

High

481729

SSB1
Ribosome-associated molecular chaperone SSB1

1

3

High-throughput

0.479

High

481731

RS17B
Small ribosomal subunit protein eS17B

1

2

High-throughput

0.479

High

481732

HSC82
ATP-dependent molecular chaperone HSC82

1

1

High-throughput

0.479

High

481734

RS3A2
Small ribosomal subunit protein eS1B

1

3

High-throughput

0.479

High

481740

KRR1
KRR1 small subunit processome component

1

1

High-throughput

0.479

High

481744

SPB4
ATP-dependent rRNA helicase SPB4

1

7

High-throughput

0.479

High

481746

RL16A
Large ribosomal subunit protein uL13A

1

2

High-throughput

0.479

High

481759

NDK
Nucleoside diphosphate kinase

1

1

High-throughput

0.479

High

481765

UBP13
Ubiquitin carboxyl-terminal hydrolase 13

1

3

High-throughput

0.479

High

481770

RS27B
Small ribosomal subunit protein eS27B

1

2

High-throughput

0.479

High

481780

RS26A
Small ribosomal subunit protein eS26A

1

2

High-throughput

0.479

High

481781

RS26B
Small ribosomal subunit protein eS26B

1

2

High-throughput

0.479

High

481788

RLP7
Ribosome biogenesis protein RLP7

1

1

High-throughput

0.479

High

481789

RS29A
Small ribosomal subunit protein uS14A

1

1

High-throughput

0.479

High

481790

RS29B
Small ribosomal subunit protein uS14B

1

1

High-throughput

0.479

High

481793

RSSA2
Small ribosomal subunit protein uS2B

1

6

High-throughput

0.479

High

481794

RS10B
Small ribosomal subunit protein eS10B

1

2

High-throughput

0.479

High

481795

RS7B
Small ribosomal subunit protein eS7B

1

2

High-throughput

0.479

High

481799

PRP43
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43

1

1

High-throughput

0.479

High

481800

EIF2A
Eukaryotic translation initiation factor 2A

1

2

High-throughput

0.479

High

481804

BRE5
UBP3-associated protein BRE5

1

1

High-throughput

0.479

High

481806

CSL4
Exosome complex component CSL4

1

1

High-throughput

0.479

High

481808

NOP15
Ribosome biogenesis protein 15

1

5

High-throughput

0.479

High

481814

UBP3
Ubiquitin carboxyl-terminal hydrolase 3

1

5

High-throughput

0.479

High

481817

XRN2
5'-3' exoribonuclease 2

1

2

High-throughput

0.479

High

481820

HAS1
ATP-dependent RNA helicase HAS1

1

7

High-throughput

0.479

High

481825

TMA64
Translation machinery-associated protein 64

1

1

High-throughput

0.479

High

481827

TSR1
Ribosome biogenesis protein TSR1

1

2

High-throughput

0.479

High

481832

TMA46
Translation machinery-associated protein 46

1

1

High-throughput

0.479

High

481836

YRA1
RNA annealing protein YRA1

1

4

High-throughput

0.479

High

481840

RS21B
Small ribosomal subunit protein eS21B

1

2

High-throughput

0.479

High

481841

RS25A
Small ribosomal subunit protein eS25A

1

2

High-throughput

0.479

High

481842

RS28A
Small ribosomal subunit protein eS28A

1

2

High-throughput

0.479

High

481761

RRP14
Ribosomal RNA-processing protein 14

1

0

Small-scale

0.460

High

481743

PAT1
Deadenylation-dependent mRNA-decapping factor PAT1

1

0

Small-scale

0.458

High

481766

GID4
Vacuolar import and degradation protein 24

1

0

High-throughput

0.458

High

481776

STM1
Suppressor protein STM1

1

0

High-throughput

0.458

High

481779

LAA1
AP-1 accessory protein LAA1

1

0

High-throughput

0.458

High

481791

UTP10
U3 small nucleolar RNA-associated protein 10

1

0

High-throughput

0.458

High

481801

SLX9
Ribosome biogenesis protein SLX9

1

0

Small-scale

0.458

High

481803

PPID
Peptidyl-prolyl cis-trans isomerase CPR6

1

0

Small-scale

0.458

High

481834

KAD6
Adenylate kinase isoenzyme 6 homolog FAP7

1

0

Small-scale

0.458

High

481753

RPD3
Histone deacetylase RPD3

1

3

Small-scale

0.457

High

481751

PRP19
Pre-mRNA-processing factor 19

1

8

Small-scale

0.445

High

481783

SSB2
Ribosome-associated molecular chaperone SSB2

1

3

High-throughput

0.445

High

339373

CDK1
Cyclin-dependent kinase 1

1

1

High-throughput

0.437

High

424026

QCR1
Cytochrome b-c1 complex subunit 1, mitochondrial

1

2

Small-scale

0.437

High

481728

SSBP1
Single-stranded nucleic acid-binding protein

1

4

High-throughput

0.437

High

481733

PMA2
Plasma membrane ATPase 2

1

1

High-throughput

0.437

High

481736

DBP2
ATP-dependent RNA helicase DBP2

1

2

High-throughput

0.437

High

481755

PRS6A
26S proteasome regulatory subunit 6A

1

4

High-throughput

0.437

High

481777

DHH1
ATP-dependent RNA helicase DHH1

1

7

High-throughput

0.437

High

481782

NSA2
Ribosome biogenesis protein NSA2

1

2

High-throughput

0.437

High

481798

VID30
Vacuolar import and degradation protein 30

1

6

High-throughput

0.437

High

481805

GIS2
Zinc finger protein GIS2

1

3

High-throughput

0.437

High

481809

NST1
Stress response protein NST1

1

2

High-throughput

0.437

High

481811

FAP1
FKBP12-associated protein 1

1

3

High-throughput

0.437

High

481812

ORC1
Origin recognition complex subunit 1

1

2

High-throughput

0.437

High

481813

NUM1
Nuclear migration protein NUM1

1

2

High-throughput

0.437

High

481815

NOP3
Serine/arginine

1

12

High-throughput

0.437

High

481818

RLI1
Translation initiation factor RLI1

1

2

Small-scale

0.437

High

481819

TOM1
E3 ubiquitin-protein ligase TOM1

1

5

High-throughput

0.437

High

481822

RUVB1
RuvB-like protein 1

1

1

High-throughput

0.437

High

481824

UTP14
U3 small nucleolar RNA-associated protein 14

1

1

High-throughput

0.437

High

481826

MRD1
Multiple RNA-binding domain-containing protein 1

1

4

High-throughput

0.437

High

481837

MAK21
Ribosome biogenesis protein MAK21

1

1

High-throughput

0.437

High

481839

RUVB2
RuvB-like protein 2

1

1

High-throughput

0.437

High

481833

THP3
Protein THP3

1

1

Small-scale

0.407

High

481730

CAF20
Cap-associated protein CAF20

2

0

High-throughput

0.305

High

481735

PSA2
Proteasome subunit alpha type-2

1

0

High-throughput

0.249

Low

481741

BUD23
18S rRNA

1

0

High-throughput

0.249

Low

481748

TF2B
Transcription initiation factor IIB

1

0

High-throughput

0.249

Low

481750

RPC3
DNA-directed RNA polymerase III subunit RPC3

1

0

High-throughput

0.249

Low

481752

SPT16
FACT complex subunit SPT16

1

0

High-throughput

0.249

Low

481760

EAP1
Protein EAP1

1

0

High-throughput

0.249

Low

481762

YKH1
Uncharacterized oxidoreductase YKL071W

1

0

High-throughput

0.249

Low

481771

GOSR1
Golgi SNAP receptor complex member 1

1

0

High-throughput

0.249

Low

481772

OTU2
OTU domain-containing protein 2

1

0

High-throughput

0.249

Low

481773

RPN1
26S proteasome regulatory subunit RPN1

1

0

High-throughput

0.249

Low

481785

TM108
Protein TMA108

1

0

High-throughput

0.249

Low

481786

ULP2
Ubiquitin-like-specific protease 2

1

0

Small-scale

0.249

Low

481787

DSN1
Kinetochore-associated protein DSN1

1

0

High-throughput

0.249

Low

481797

VATG
V-type proton ATPase subunit G

1

0

High-throughput

0.249

Low

481802

PIL1
Sphingolipid long chain base-responsive protein PIL1

1

0

High-throughput

0.249

Low

481807

NAT10
RNA cytidine acetyltransferase

1

0

High-throughput

0.249

Low

481810

SAM50
Sorting assembly machinery 50 kDa subunit

1

0

High-throughput

0.249

Low

481821

FIN1
Filament protein FIN1

1

0

Small-scale

0.249

Low

481828

VAM6
Vacuolar morphogenesis protein 6

1

0

High-throughput

0.249

Low

481829

SGO1
Shugoshin

1

0

High-throughput

0.249

Low

481831

AP3D
AP-3 complex subunit delta

1

0

High-throughput

0.249

Low

481835

TSR3
18S rRNA aminocarboxypropyltransferase

1

0

High-throughput

0.249

Low

481778

YM11
Uncharacterized protein YMR124W

1

0

High-throughput

0.232

Low


Service provided by Combinatics, Japan

Last updated: 15 Jul 2024