Protein: NUP60
Nucleoporin NUP60 (Nuclear pore protein NUP60)

Gene: NUP60
Organism: Saccharomyces cerevisiae S288C
Interactions: 74
UniProt ID: P39705

Gene Ontology (top 5):
GO:0000972 - transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0000973 - post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0005543 - phospholipid binding
GO:0005634 - nucleus
GO:0005635 - nuclear envelope

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

813657

IMB1
Importin subunit beta-1

14

2

Small-scale

0.762

High

738472

NUP2
Nucleoporin NUP2

12

2

Small-scale

0.759

High

813626

IMB4
Importin subunit beta-4

8

2

Small-scale

0.748

High

813651

IMA1
Importin subunit alpha

11

0

Small-scale

0.726

High

813647

MLP1
Protein MLP1

4

1

Small-scale

0.680

High

634238

NUP1
Nucleoporin NUP1

4

3

Small-scale

0.676

High

524002

HSP71
Heat shock protein SSA1

4

1

Small-scale

0.672

High

813662

MEX67
mRNA export factor MEX67

4

0

Small-scale

0.656

High

813641

NUP84
Nucleoporin NUP84

4

0

Small-scale

0.654

High

544936

SSB1
Ribosome-associated molecular chaperone SSB1

3

1

Small-scale

0.633

High

782523

NU133
Nucleoporin NUP133

3

0

Small-scale

0.623

High

577303

NSP1
Nucleoporin NSP1

2

5

High-throughput

0.584

High

813649

NU116
Nucleoporin NUP116/NSP116

2

5

Small-scale

0.571

High

813634

NUP85
Nucleoporin NUP85

2

0

Small-scale

0.569

High

403518

PABP
Polyadenylate-binding protein, cytoplasmic and nuclear

2

0

Small-scale

0.559

High

738848

NAB2
Nuclear polyadenylated RNA-binding protein NAB2

2

0

Small-scale

0.559

High

813635

SAC3
Nuclear mRNA export protein SAC3

2

0

Small-scale

0.559

High

813640

NU188
Nucleoporin NUP188

2

0

High-throughput

0.559

High

364543

CDK1
Cyclin-dependent kinase 1

1

0

High-throughput

0.537

High

737864

HOG1
Mitogen-activated protein kinase HOG1

1

0

Small-scale

0.537

High

813645

NOP3
Serine/arginine

1

1

Small-scale

0.515

High

813639

UBP8
Ubiquitin carboxyl-terminal hydrolase 8

1

0

High-throughput

0.513

High

758032

MTR2
mRNA transport regulator MTR2

1

0

Small-scale

0.505

High

734670

IMB3
Importin subunit beta-3

1

2

Small-scale

0.501

High

813642

SEH1
Nucleoporin SEH1

1

1

Small-scale

0.501

High

813656

SEC13
Protein transport protein SEC13

1

1

Small-scale

0.501

High

646410

RAD53
Serine/threonine-protein kinase RAD53

1

0

Small-scale

0.480

High

776516

NU120
Nucleoporin NUP120

1

0

Small-scale

0.480

High

813655

ARX1
Probable metalloprotease ARX1

1

0

Small-scale

0.480

High

709766

BMH1
Protein BMH1

1

1

High-throughput

0.479

High

741613

HSP7F
Heat shock protein homolog SSE1

1

2

Small-scale

0.479

High

760258

BMH2
Protein BMH2

1

1

High-throughput

0.479

High

813631

MLP2
Protein MLP2

1

1

High-throughput

0.479

High

813632

NU159
Nucleoporin NUP159

1

2

High-throughput

0.479

High

813637

NUP57
Nucleoporin NUP57

1

3

High-throughput

0.479

High

813638

CTF18
Chromosome transmission fidelity protein 18

1

1

High-throughput

0.479

High

813648

NU100
Nucleoporin NUP100/NSP100

1

5

Small-scale

0.479

High

813660

YRA1
RNA annealing protein YRA1

1

1

High-throughput

0.479

High

740300

PAH1
Phosphatidic acid phosphohydrolase 1

1

0

Small-scale

0.460

High

453609

PYR1
Multifunctional protein URA2

1

0

High-throughput

0.458

High

679698

CDC48
Cell division control protein 48

1

0

High-throughput

0.458

High

707146

TF2B
Transcription initiation factor IIB

1

0

High-throughput

0.458

High

734988

RPC3
DNA-directed RNA polymerase III subunit RPC3

1

0

High-throughput

0.458

High

736648

ASF1
Histone chaperone ASF1

1

0

Small-scale

0.458

High

745744

GSP1
GTP-binding nuclear protein GSP1/CNR1

1

0

Small-scale

0.458

High

803793

BRL1
Nucleus export protein BRL1

1

0

Small-scale

0.458

High

813403

PO152
Nucleoporin POM152

1

0

High-throughput

0.458

High

813624

NUP60
Nucleoporin NUP60

1

0

Small-scale

0.458

High

813625

NU157
Nucleoporin NUP157

1

0

High-throughput

0.458

High

813629

NUP82
Nucleoporin NUP82

1

0

High-throughput

0.458

High

813633

DSN1
Kinetochore-associated protein DSN1

1

0

High-throughput

0.458

High

813636

NU192
Nucleoporin NUP192

1

0

High-throughput

0.458

High

813644

H3
Histone H3

1

0

High-throughput

0.458

High

813650

ULP1
Ubiquitin-like-specific protease 1

1

0

High-throughput

0.458

High

813652

HOS3
Histone deacetylase HOS3

1

0

Small-scale

0.458

High

813653

ESC1
Silent chromatin protein ESC1

1

0

Small-scale

0.458

High

813654

GIS1
Transcriptional activator/repressor GIS1

1

0

High-throughput

0.458

High

813659

URN1
Pre-mRNA-splicing factor URN1

1

0

High-throughput

0.458

High

813661

CMR1
DNA damage-binding protein CMR1

1

0

High-throughput

0.458

High

575593

PP2B2
Serine/threonine-protein phosphatase 2B catalytic subunit A2

1

1

Small-scale

0.457

High

656315

PP2B1
Serine/threonine-protein phosphatase 2B catalytic subunit A1

1

1

Small-scale

0.457

High

526739

HSP72
Heat shock protein SSA2

1

1

High-throughput

0.445

High

813627

SSB2
Ribosome-associated molecular chaperone SSB2

1

1

High-throughput

0.445

High

676016

MAS5
Mitochondrial protein import protein MAS5

1

0

High-throughput

0.426

High

813628

JEM1
DnaJ-like chaperone JEM1

1

0

High-throughput

0.426

High

813630

6P21
6-phosphofructo-2-kinase 1

1

0

High-throughput

0.426

High

813646

ADA2
SAGA complex subunit ADA2

1

0

High-throughput

0.426

High

779538

LHS1
Heat shock protein 70 homolog LHS1

1

2

High-throughput

0.407

High

510506

HSP77
Import motor subunit, mitochondrial

1

0

Small-scale

0.249

Low

797738

AIM4
Altered inheritance of mitochondria protein 4

1

0

High-throughput

0.249

Low

813643

GIS2
Zinc finger protein GIS2

1

0

High-throughput

0.249

Low

813658

SEC10
Exocyst complex component SEC10

1

0

Small-scale

0.249

Low

752279

HSP78
Heat shock protein 78, mitochondrial

1

0

High-throughput

0.232

Low


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Last updated: 11Aug2025