HitPredict - High confidence protein-protein interactions

Download interactions: TXT MITAB-2.5

Interaction	Interactor	Experiments	Homologs	Category	Interaction Score	Confidence
1031027	NOP3 Serine/arginine	8	18	Small-scale	0.970	High
1031039	SKY1 Serine/threonine-protein kinase SKY1	7	20	Small-scale	0.963	High
757517	NCBP1 Nuclear cap-binding protein complex subunit 1	7	11	Small-scale	0.951	High
1031070	NCBP2 Nuclear cap-binding protein subunit 2	5	20	Small-scale	0.922	High
676762	GBP2 Serine/arginine	5	19	Small-scale	0.909	High
1031084	MTR10 mRNA transport regulator MTR10	4	18	Small-scale	0.893	High
1025646	NAM8 Protein NAM8	4	18	Small-scale	0.892	High
1027979	RU17 U1 small nuclear ribonucleoprotein 70 kDa homolog	4	20	Small-scale	0.878	High
743547	RU1A U1 small nuclear ribonucleoprotein A	4	1	Small-scale	0.878	High
741066	PUB1 Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1	4	20	Small-scale	0.875	High
1031075	YRA1 RNA annealing protein YRA1	4	20	Small-scale	0.874	High
1031045	CTK1 CTD kinase subunit alpha	3	20	Small-scale	0.861	High
435294	RS3 Small ribosomal subunit protein uS3	3	5	High-throughput	0.827	High
518109	SSBP1 Single-stranded nucleic acid-binding protein	2	19	Small-scale	0.768	High
792912	ANM1 Protein arginine N-methyltransferase 1	13	7	Small-scale	0.763	High
403624	PABP Polyadenylate-binding protein, cytoplasmic and nuclear	2	19	Small-scale	0.754	High
1031077	BBP Branchpoint-bridging protein	2	15	Small-scale	0.754	High
1031086	HRP1 Nuclear polyadenylated RNA-binding protein 4	2	20	Small-scale	0.754	High
1031041	SNU56 56 kDa U1 small nuclear ribonucleoprotein component	2	0	Small-scale	0.728	High
470576	RPB2 DNA-directed RNA polymerase II subunit RPB2	2	0	Small-scale	0.716	High
1031085	MEX67 mRNA export factor MEX67	5	8	Small-scale	0.714	High
410288	RL25 Large ribosomal subunit protein uL23	2	6	Small-scale	0.694	High
739998	CDC5 Cell cycle serine/threonine-protein kinase CDC5/MSD2	1	2	Small-scale	0.691	High
826371	SGN1 RNA-binding protein SGN1	1	20	High-throughput	0.691	High
1031068	HRK1 Serine/threonine-protein kinase HRK1	1	7	High-throughput	0.691	High
402091	RPB1 DNA-directed RNA polymerase II subunit RPB1	4	4	Small-scale	0.680	High
1031032	XRN2 5'-3' exoribonuclease 2	4	12	Small-scale	0.676	High
825626	AIR1 Protein AIR1	3	14	Small-scale	0.672	High
692608	NSR1 Nuclear localization sequence-binding protein	1	20	Small-scale	0.656	High
545936	SSB1 Ribosome-associated molecular chaperone SSB1	3	9	Small-scale	0.656	High
1031080	AIR2 Protein AIR2	5	14	Small-scale	0.651	High
586004	CSK21 Casein kinase II subunit alpha	1	20	Small-scale	0.647	High
602607	PHO85 Cyclin-dependent protein kinase PHO85	1	12	Small-scale	0.647	High
815213	IF4F1 Eukaryotic initiation factor 4F subunit p150	3	16	Small-scale	0.646	High
671029	SIS1 Protein SIS1	3	2	High-throughput	0.643	High
444601	DED1 ATP-dependent RNA helicase DED1	3	9	Small-scale	0.642	High
393190	HSP82 ATP-dependent molecular chaperone HSP82	3	5	High-throughput	0.640	High
558837	CAF20 Cap-associated protein CAF20	3	2	Small-scale	0.640	High
594521	RPB3 DNA-directed RNA polymerase II subunit RPB3	3	2	Small-scale	0.640	High
645507	XRN1 5'-3' exoribonuclease 1	3	12	Small-scale	0.640	High
674780	RS2 Small ribosomal subunit protein uS5	3	8	Small-scale	0.640	High
780846	MUD2 Splicing factor MUD2	3	1	Small-scale	0.640	High
524874	HSP71 Heat shock protein SSA1	3	7	High-throughput	0.633	High
815541	RSP5 E3 ubiquitin-protein ligase RSP5	2	18	Small-scale	0.619	High
646611	TRX1 Thioredoxin-1	1	2	High-throughput	0.618	High
652893	TRX2 Thioredoxin-2	1	1	High-throughput	0.618	High
656991	BUR1 Serine/threonine-protein kinase BUR1	1	15	Small-scale	0.618	High
676967	SRO9 RNA-binding protein SRO9	1	20	Small-scale	0.618	High
807687	HRB1 Serine/arginine	1	20	Small-scale	0.618	High
808772	NAB3 Nuclear polyadenylated RNA-binding protein 3	1	1	Small-scale	0.618	High
921604	NRD1 Protein NRD1	1	3	Small-scale	0.618	High
922172	PAP2 Poly(A) RNA polymerase protein 2	1	11	Small-scale	0.618	High
1031030	CUS1 Cold sensitive U2 snRNA suppressor 1	1	4	High-throughput	0.618	High
1031042	ARX1 Probable metalloprotease ARX1	2	3	Small-scale	0.601	High
666527	DBP2 ATP-dependent RNA helicase DBP2	2	7	Small-scale	0.600	High
1031060	SUB2 ATP-dependent RNA helicase SUB2	2	20	Small-scale	0.600	High
1031051	RU1C U1 small nuclear ribonucleoprotein C	2	1	Small-scale	0.595	High
514781	RS18A Small ribosomal subunit protein uS13A	2	2	High-throughput	0.584	High
689609	RS7A Small ribosomal subunit protein eS7A	2	4	High-throughput	0.584	High
747528	RSSA1 Small ribosomal subunit protein uS2A	2	7	High-throughput	0.584	High
792194	GBLP Small ribosomal subunit protein RACK1	2	20	High-throughput	0.584	High
802330	RS20 Small ribosomal subunit protein uS10	2	4	High-throughput	0.584	High
826752	DSN1 Kinetochore-associated protein DSN1	2	2	High-throughput	0.584	High
874473	RS12 Small ribosomal subunit protein eS12	2	2	High-throughput	0.584	High
916856	DXO Decapping nuclease RAI1	2	1	Small-scale	0.584	High
1031028	RS15 Small ribosomal subunit protein uS19	2	7	High-throughput	0.584	High
1031061	LUC7 Protein LUC7	2	9	Small-scale	0.584	High
579912	HSC82 ATP-dependent molecular chaperone HSC82	2	5	High-throughput	0.571	High
1031059	BRE1 E3 ubiquitin-protein ligase BRE1	2	17	Small-scale	0.571	High
1031057	URN1 Pre-mRNA-splicing factor URN1	2	0	High-throughput	0.569	High
748002	SMY2 Protein SMY2	2	0	Small-scale	0.559	High
918223	SNU71 U1 small nuclear ribonucleoprotein component SNU71	2	0	Small-scale	0.559	High
874227	TRF5 Poly(A) RNA polymerase protein 1	1	11	Small-scale	0.553	High
1031074	RRP6 Exosome complex exonuclease RRP6	1	2	Small-scale	0.552	High
819536	SSB2 Ribosome-associated molecular chaperone SSB2	2	9	High-throughput	0.552	High
742198	HSP7F Heat shock protein homolog SSE1	1	9	High-throughput	0.536	High
918427	EIF2A Eukaryotic translation initiation factor 2A	1	7	High-throughput	0.536	High
1031037	GCN5 Histone acetyltransferase GCN5	1	20	High-throughput	0.536	High
1031055	MAG2 E3 ubiquitin-protein ligase MAG2	1	1	High-throughput	0.536	High
383846	RS17A Small ribosomal subunit protein eS17A	2	4	High-throughput	0.533	High
455212	RS19A Small ribosomal subunit protein eS19A	2	7	High-throughput	0.533	High
503190	RS22A Small ribosomal subunit protein uS8A	2	2	High-throughput	0.533	High
512597	RS6A Small ribosomal subunit protein eS6A	2	8	High-throughput	0.533	High
513163	RS8A Small ribosomal subunit protein eS8A	2	4	High-throughput	0.533	High
753532	RS3A1 Small ribosomal subunit protein eS1A	2	5	High-throughput	0.533	High
511691	RS23B Small ribosomal subunit protein uS12B	1	0	High-throughput	0.517	High
806644	RIX1 Pre-rRNA-processing protein RIX1	1	1	Small-scale	0.515	High
813645	NUP60 Nucleoporin NUP60	1	1	Small-scale	0.515	High
1031029	MLP1 Protein MLP1	1	19	Small-scale	0.515	High
1031071	KEL3 Kelch repeat-containing protein 3	1	3	High-throughput	0.515	High
1031081	NOP58 Nucleolar protein 58	1	4	High-throughput	0.515	High
738900	NAB2 Nuclear polyadenylated RNA-binding protein NAB2	1	7	Small-scale	0.508	High
704644	SBA1 Co-chaperone protein SBA1	1	0	Small-scale	0.504	High
750291	PRP40 Pre-mRNA-processing protein PRP40	1	6	High-throughput	0.501	High
815327	IF4F2 Eukaryotic initiation factor 4F subunit p130	1	20	Small-scale	0.501	High
1031040	ENT5 Epsin-5	1	1	Small-scale	0.501	High
806158	NMD3 60S ribosomal export protein NMD3	1	0	Small-scale	0.493	High
1031062	NOP6 Nucleolar protein 6	1	2	High-throughput	0.489	High
667044	PCL1 PHO85 cyclin-1	1	0	Small-scale	0.480	High
849923	WWM1 WW domain-containing protein WWM1	1	0	High-throughput	0.480	High
149905	RS9A Small ribosomal subunit protein uS4A	1	8	High-throughput	0.479	High
381216	H2B1 Histone H2B.1	1	6	Small-scale	0.479	High
381601	H2B2 Histone H2B.2	1	6	Small-scale	0.479	High
382287	H4 Histone H4	1	10	Small-scale	0.479	High
436113	RS13 Small ribosomal subunit protein uS15	1	7	High-throughput	0.479	High
438756	SC160 Protein SCP160	1	20	High-throughput	0.479	High
442063	RS14A Small ribosomal subunit protein uS11A	1	5	High-throughput	0.479	High
449166	CALM Calmodulin	1	1	High-throughput	0.479	High
511956	RS30A Small ribosomal subunit protein eS30A	1	2	High-throughput	0.479	High
512138	RS4A Small ribosomal subunit protein eS4A	1	4	High-throughput	0.479	High
515308	RL35A Large ribosomal subunit protein uL29A	1	3	High-throughput	0.479	High
577571	CYC8 General transcriptional corepressor CYC8	1	12	Small-scale	0.479	High
657969	PRP28 Pre-mRNA-splicing ATP-dependent RNA helicase PRP28	1	18	Small-scale	0.479	High
661187	SPT6 Transcription elongation factor SPT6	1	1	Small-scale	0.479	High
672780	SNT1 Probable DNA-binding protein SNT1	1	3	Small-scale	0.479	High
677229	SPB1 27S pre-rRNA	1	11	High-throughput	0.479	High
678528	TAH1 TPR repeat-containing protein associated with Hsp90	1	6	Small-scale	0.479	High
679980	CDC48 Cell division control protein 48	1	9	High-throughput	0.479	High
688939	RS5 Small ribosomal subunit protein uS7	1	7	High-throughput	0.479	High
689107	RL16A Large ribosomal subunit protein uL13A	1	5	High-throughput	0.479	High
694622	SPT5 Transcription elongation factor SPT5	1	2	Small-scale	0.479	High
707929	TF2B Transcription initiation factor IIB	1	3	High-throughput	0.479	High
709932	BMH1 Protein BMH1	1	6	High-throughput	0.479	High
735116	RPC3 DNA-directed RNA polymerase III subunit RPC3	1	1	High-throughput	0.479	High
739186	PRP19 Pre-mRNA-processing factor 19	1	14	Small-scale	0.479	High
743271	PP12 Serine/threonine-protein phosphatase PP1-2	1	13	Small-scale	0.479	High
744329	CHD1 Chromo domain-containing protein 1	1	20	Small-scale	0.479	High
750130	MRT4 Ribosome assembly factor MRT4	1	5	Small-scale	0.479	High
778485	RS27A Small ribosomal subunit protein eS27A	1	3	High-throughput	0.479	High
779319	CENPA Histone H3-like centromeric protein CSE4	1	7	High-throughput	0.479	High
780053	EAP1 Protein EAP1	1	2	High-throughput	0.479	High
781154	SWD2 COMPASS component SWD2	1	19	Small-scale	0.479	High
796350	FL2D Protein MUM2	1	1	Small-scale	0.479	High
806342	KOG1 Target of rapamycin complex 1 subunit KOG1	1	8	Small-scale	0.479	High
806490	NACA Nascent polypeptide-associated complex subunit alpha	1	1	High-throughput	0.479	High
818042	LSM4 LSM complex subunit LSM4	1	3	Small-scale	0.479	High
818262	NSA2 Ribosome biogenesis protein NSA2	1	7	High-throughput	0.479	High
820387	RIO2 Serine/threonine-protein kinase RIO2	1	9	High-throughput	0.479	High
829949	PRP17 Pre-mRNA-processing factor 17	1	18	Small-scale	0.479	High
835866	RL10 Large ribosomal subunit protein uL16	1	1	Small-scale	0.479	High
850156	RPN11 Ubiquitin carboxyl-terminal hydrolase RPN11	1	14	High-throughput	0.479	High
863295	CTK2 CTD kinase subunit beta	1	14	Small-scale	0.479	High
863306	CTK3 CTD kinase subunit gamma	1	1	Small-scale	0.479	High
864125	LSM1 LSM1-LSM7 complex subunit LSM1	1	9	Small-scale	0.479	High
864183	ALB1 Ribosome biogenesis protein ALB1	1	1	High-throughput	0.479	High
864498	MTR4 ATP-dependent RNA helicase DOB1	1	20	Small-scale	0.479	High
865706	MOG1 Nuclear import protein MOG1	1	1	High-throughput	0.479	High
870673	RS7B Small ribosomal subunit protein eS7B	1	4	High-throughput	0.479	High
917457	PRP43 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43	1	11	Small-scale	0.479	High
917674	LSG1 Large subunit GTPase 1	1	9	High-throughput	0.479	High
921192	THO2 THO complex subunit 2	1	16	Small-scale	0.479	High
923184	NOG2 Nucleolar GTP-binding protein 2	1	9	High-throughput	0.479	High
923854	GIS2 Zinc finger protein GIS2	1	15	High-throughput	0.479	High
924175	UBP10 Ubiquitin carboxyl-terminal hydrolase 10	1	9	High-throughput	0.479	High
1018316	CTR9 RNA polymerase-associated protein CTR9	1	7	Small-scale	0.479	High
1031035	HOT1 High-osmolarity-induced transcription protein 1	1	1	Small-scale	0.479	High
1031036	TOM1 E3 ubiquitin-protein ligase TOM1	1	18	High-throughput	0.479	High
1031044	RUVB1 RuvB-like protein 1	1	5	High-throughput	0.479	High
1031047	PUF6 Pumilio homology domain family member 6	1	12	Small-scale	0.479	High
1031049	RRP5 rRNA biogenesis protein RRP5	1	13	High-throughput	0.479	High
1031053	MMS22 E3 ubiquitin-protein ligase substrate receptor MMS22	1	2	High-throughput	0.479	High
1031054	TFC6 Transcription factor tau 91 kDa subunit	1	2	High-throughput	0.479	High
1031058	TSR1 Ribosome biogenesis protein TSR1	1	5	High-throughput	0.479	High
1031064	BUD20 Bud site selection protein 20	1	1	High-throughput	0.479	High
1031066	SGO1 Shugoshin	1	1	High-throughput	0.479	High
1031072	TMA46 Translation machinery-associated protein 46	1	1	High-throughput	0.479	High
1031076	MAK21 Ribosome biogenesis protein MAK21	1	11	High-throughput	0.479	High
1031079	RUVB2 RuvB-like protein 2	1	5	High-throughput	0.479	High
700278	GAR1 H/ACA ribonucleoprotein complex subunit GAR1	1	4	Small-scale	0.464	High
743779	RML2 Large ribosomal subunit protein uL2m	1	5	Small-scale	0.464	High
632107	RPB4 DNA-directed RNA polymerase II subunit RPB4	1	0	Small-scale	0.458	High
632203	RPAB1 DNA-directed RNA polymerases I, II, and III subunit RPABC1	1	0	Small-scale	0.458	High
797776	AIM4 Altered inheritance of mitochondria protein 4	1	0	High-throughput	0.458	High
805750	YHS7 Uncharacterized protein YHR127W	1	0	High-throughput	0.458	High
805801	NSG1 Protein NSG1	1	0	High-throughput	0.458	High
809393	STM1 Suppressor protein STM1	1	0	High-throughput	0.458	High
815379	RS26A Small ribosomal subunit protein eS26A	1	0	High-throughput	0.458	High
816613	PXP1 2-hydroxyacyl-CoA lyase	1	0	High-throughput	0.458	High
824930	TM108 Protein TMA108	1	0	High-throughput	0.458	High
858346	SAC3 Nuclear mRNA export protein SAC3	1	0	High-throughput	0.458	High
924124	SQS1 Protein SQS1	1	0	High-throughput	0.458	High
1031033	LGE1 Transcriptional regulatory protein LGE1	1	0	High-throughput	0.458	High
1031034	IMA1 Importin subunit alpha	1	0	Small-scale	0.458	High
1031038	CWC21 Pre-mRNA-splicing factor CWC21	1	0	Small-scale	0.458	High
1031043	MTQ2 eRF1 methyltransferase catalytic subunit MTQ2	1	0	High-throughput	0.458	High
1031046	RRP17 Ribosomal RNA-processing protein 17	1	0	High-throughput	0.458	High
1031050	RBS1 RNA-binding suppressor of PAS kinase protein 1	1	0	Small-scale	0.458	High
1031052	BUR2 Protein BUR2	1	0	Small-scale	0.458	High
1031056	IWS1 Transcription factor SPN1	1	0	Small-scale	0.458	High
1031063	UBR2 E3 ubiquitin-protein ligase UBR2	1	0	High-throughput	0.458	High
1031067	MCA1 Metacaspase-1	1	0	High-throughput	0.458	High
1031073	YL11B Transposon Ty1-LR1 Gag-Pol polyprotein	1	0	High-throughput	0.458	High
866163	ENT3 Epsin-3	1	1	Small-scale	0.457	High
1031031	NU116 Nucleoporin NUP116/NSP116	1	8	Small-scale	0.457	High
727254	HS104 Heat shock protein 104	1	2	High-throughput	0.445	High
752623	HSP78 Heat shock protein 78, mitochondrial	1	1	High-throughput	0.445	High
763003	SPT7 SAGA complex subunit SPT7	1	13	High-throughput	0.445	High
811373	CAJ1 Protein CAJ1	1	1	High-throughput	0.445	High
1025160	SEN1 Helicase SEN1	1	20	Small-scale	0.445	High
150187	THP2 THO complex subunit THP2	1	2	High-throughput	0.437	High
433798	RL26A Large ribosomal subunit protein uL24A	1	12	High-throughput	0.437	High
434071	RL33A Large ribosomal subunit protein eL33A	1	1	High-throughput	0.437	High
434635	RL22A Large ribosomal subunit protein eL22A	1	1	High-throughput	0.437	High
435620	RS9B Small ribosomal subunit protein uS4B	1	8	High-throughput	0.437	High
455438	RS19B Small ribosomal subunit protein eS19B	1	7	High-throughput	0.437	High
504369	RL31A Large ribosomal subunit protein eL31A	1	5	High-throughput	0.437	High
511843	RS24A Small ribosomal subunit protein eS24A	1	3	High-throughput	0.437	High
513904	RS11B Small ribosomal subunit protein uS17B	1	1	High-throughput	0.437	High
514180	RS16B Small ribosomal subunit protein uS9B	1	12	High-throughput	0.437	High
673585	NLE1 Ribosome assembly protein 4	1	20	High-throughput	0.437	High
677528	KRR1 KRR1 small subunit processome component	1	8	High-throughput	0.437	High
812573	LAA1 AP-1 accessory protein LAA1	1	3	High-throughput	0.437	High
824768	MLP2 Protein MLP2	1	18	High-throughput	0.437	High
925367	SAM50 Sorting assembly machinery 50 kDa subunit	1	1	High-throughput	0.437	High
942015	RL22B Large ribosomal subunit protein eL22B	1	1	High-throughput	0.437	High
1025006	NUM1 Nuclear migration protein NUM1	1	4	High-throughput	0.437	High
1031048	POB3 FACT complex subunit POB3	1	4	High-throughput	0.437	High
1031069	RS10A Small ribosomal subunit protein eS10A	1	6	High-throughput	0.437	High
1031078	DBP10 ATP-dependent RNA helicase DBP10	1	20	High-throughput	0.437	High
807257	SPT8 SAGA complex subunit SPT8	1	0	High-throughput	0.426	High
812254	YM11 Uncharacterized protein YMR124W	1	0	High-throughput	0.426	High
577197	SEC63 Protein translocation protein SEC63	1	6	High-throughput	0.407	High
811018	TCPD T-complex protein 1 subunit delta	1	2	High-throughput	0.407	High
811140	TCPZ T-complex protein 1 subunit zeta	1	1	High-throughput	0.407	High
823290	JEM1 DnaJ-like chaperone JEM1	1	1	High-throughput	0.407	High
823636	TCPE T-complex protein 1 subunit epsilon	1	2	High-throughput	0.407	High
850648	ERJ5 ER-localized J domain-containing protein 5	1	1	High-throughput	0.407	High
733818	VPS10 Vacuolar protein sorting/targeting protein VPS10	2	0	High-throughput	0.324	High
1031065	AUS1 ATP-dependent permease AUS1	1	0	High-throughput	0.261	Low
503517	RS28B Small ribosomal subunit protein eS28B	1	0	High-throughput	0.249	Low
660512	HXT2 High-affinity glucose transporter HXT2	1	0	High-throughput	0.249	Low
739728	SPT16 FACT complex subunit SPT16	1	0	Small-scale	0.249	Low
831854	RS29A Small ribosomal subunit protein uS14A	1	0	High-throughput	0.249	Low
1031082	RS21B Small ribosomal subunit protein eS21B	1	0	High-throughput	0.249	Low
1031083	RS25A Small ribosomal subunit protein eS25A	1	0	High-throughput	0.249	Low