Protein: RARA
Retinoic acid receptor alpha (RAR-alpha) (Nuclear receptor subfamily 1 group B member 1)

Gene: RARA
Organism: Mus musculus
Interactions: 77
UniProt ID: P11416

Gene Ontology (top 5):
GO:0000122 - negative regulation of transcription by RNA polymerase II
GO:0000785 - chromatin
GO:0000900 - mRNA regulatory element binding translation repressor activity
GO:0000976 - transcription cis-regulatory region binding
GO:0000977 - RNA polymerase II transcription regulatory region sequence-specific DNA binding

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

542849

NCOA1
Nuclear receptor coactivator 1

1

20

Small-scale

0.647

High

542855

CTNB1
Catenin beta-1

1

20

Small-scale

0.618

High

542858

NR1H4
Bile acid receptor

1

18

Small-scale

0.618

High

542871

NRIP1
Nuclear receptor-interacting protein 1

2

18

Small-scale

0.586

High

542829

RXRA
Retinoic acid receptor RXR-alpha

1

18

Small-scale

0.575

High

542870

KS6A5
Ribosomal protein S6 kinase alpha-5

1

18

Small-scale

0.536

High

542880

SIR1
NAD-dependent protein deacetylase sirtuin-1

1

20

Small-scale

0.536

High

542885

SNW1
SNW domain-containing protein 1

1

6

Small-scale

0.536

High

542887

Q9D4Z5
Uncharacterized protein

1

4

Small-scale

0.504

High

542844

ELOB
Elongin-B

1

1

Small-scale

0.501

High

542850

ELOC
Elongin-C

1

2

Small-scale

0.501

High

59997

ARI1A
AT-rich interactive domain-containing protein 1A

1

20

Small-scale

0.479

High

74248

EP300
Histone acetyltransferase p300

1

20

Small-scale

0.479

High

147653

THOC4
THO complex subunit 4

1

20

Small-scale

0.479

High

204617

PURB
Transcriptional regulator protein Pur-beta

1

5

Small-scale

0.479

High

313378

RBM3
RNA-binding protein 3

1

20

Small-scale

0.479

High

426918

TBA3
Tubulin alpha-3 chain

1

15

Small-scale

0.479

High

542821

RS16
Small ribosomal subunit protein uS9

1

5

Small-scale

0.479

High

542822

RSSA
Small ribosomal subunit protein uS2

1

5

Small-scale

0.479

High

542823

NDKA
Nucleoside diphosphate kinase A

1

5

Small-scale

0.479

High

542825

AP2A2
AP-2 complex subunit alpha-2

1

14

Small-scale

0.479

High

542826

HS71B
Heat shock 70 kDa protein 1B

1

13

Small-scale

0.479

High

542827

VIME
Vimentin

1

20

Small-scale

0.479

High

542828

EIF3A
Eukaryotic translation initiation factor 3 subunit A

1

20

Small-scale

0.479

High

542830

PABP1
Polyadenylate-binding protein 1

1

14

Small-scale

0.479

High

542831

DESM
Desmin

1

20

Small-scale

0.479

High

542832

ABCA1
Phospholipid-transporting ATPase ABCA1

1

3

Small-scale

0.479

High

542833

PURA
Transcriptional activator protein Pur-alpha

1

5

Small-scale

0.479

High

542835

FUS
RNA-binding protein FUS

1

20

Small-scale

0.479

High

542836

ACTB
Actin, cytoplasmic 1

1

13

Small-scale

0.479

High

542837

1433G
14-3-3 protein gamma [Cleaved into: 14-3-3 protein gamma, N-terminally processed]

1

18

Small-scale

0.479

High

542838

RS13
Small ribosomal subunit protein uS15

1

2

Small-scale

0.479

High

542839

RS4X
Small ribosomal subunit protein eS4

1

4

Small-scale

0.479

High

542840

RS6
Small ribosomal subunit protein eS6

1

2

Small-scale

0.479

High

542841

RL23
Large ribosomal subunit protein uL14

1

3

Small-scale

0.479

High

542842

RS25
Small ribosomal subunit protein eS25

1

1

Small-scale

0.479

High

542843

RS26
Small ribosomal subunit protein eS26

1

4

Small-scale

0.479

High

542845

RS3
Small ribosomal subunit protein uS3

1

4

Small-scale

0.479

High

542846

1433Z
14-3-3 protein zeta/delta

1

18

Small-scale

0.479

High

542847

RS17
Small ribosomal subunit protein eS17

1

2

Small-scale

0.479

High

542848

TGIF1
Homeobox protein TGIF1

1

9

Small-scale

0.479

High

542852

RS5
Small ribosomal subunit protein uS7

1

2

Small-scale

0.479

High

542853

G3BP1
Ras GTPase-activating protein-binding protein 1

1

6

Small-scale

0.479

High

542854

TERA
Transitional endoplasmic reticulum ATPase

1

10

Small-scale

0.479

High

542857

NFAC2
Nuclear factor of activated T-cells, cytoplasmic 2

1

20

Small-scale

0.479

High

542859

HNRPD
Heterogeneous nuclear ribonucleoprotein D0

1

20

Small-scale

0.479

High

542860

EWS
RNA-binding protein EWS

1

14

Small-scale

0.479

High

542861

DDX3X
ATP-dependent RNA helicase DDX3X

1

11

Small-scale

0.479

High

542863

SMRD3
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3

1

20

Small-scale

0.479

High

542864

TACC1
Transforming acidic coiled-coil-containing protein 1

1

5

Small-scale

0.479

High

542865

SND1
Staphylococcal nuclease domain-containing protein 1

1

7

Small-scale

0.479

High

542866

HNRPQ
Heterogeneous nuclear ribonucleoprotein Q

1

16

Small-scale

0.479

High

542869

Q8BTS0
Probable ATP-dependent RNA helicase DDX5

1

12

Small-scale

0.479

High

542873

TRIB3
Tribbles homolog 3

1

18

Small-scale

0.479

High

542874

SOSB1
SOSS complex subunit B1

1

1

Small-scale

0.479

High

542875

MED25
Mediator of RNA polymerase II transcription subunit 25

1

8

Small-scale

0.479

High

542876

HNRPU
Heterogeneous nuclear ribonucleoprotein U

1

20

Small-scale

0.479

High

542877

SFPQ
Splicing factor, proline- and glutamine-rich

1

20

Small-scale

0.479

High

542878

DDX1
ATP-dependent RNA helicase DDX1

1

15

Small-scale

0.479

High

542879

AJUBA
LIM domain-containing protein ajuba

1

20

Small-scale

0.479

High

542881

GRIP1
Glutamate receptor-interacting protein 1

1

17

Small-scale

0.479

High

542882

ROAA
Heterogeneous nuclear ribonucleoprotein A/B

1

20

Small-scale

0.479

High

542883

NONO
Non-POU domain-containing octamer-binding protein

1

20

Small-scale

0.479

High

542884

1433B
14-3-3 protein beta/alpha

1

18

Small-scale

0.479

High

542889

KAT2B
Histone acetyltransferase KAT2B

1

20

Small-scale

0.479

High

542890

NRIP2
Nuclear receptor-interacting protein 2

1

2

Small-scale

0.479

High

542891

KCND2
A-type voltage-gated potassium channel KCND2

1

1

Small-scale

0.479

High

542886

RS19
Small ribosomal subunit protein eS19

1

0

Small-scale

0.458

High

542862

TIF1A
Transcription intermediary factor 1-alpha

1

20

Small-scale

0.457

High

542856

DDR1
Epithelial discoidin domain-containing receptor 1

1

16

Small-scale

0.445

High

542867

ZN423
Zinc finger protein 423

1

13

Small-scale

0.445

High

542868

Q8BK32
Nuclear receptor co-repressor 1

1

20

Small-scale

0.439

High

542824

AP2A1
AP-2 complex subunit alpha-1

1

12

Small-scale

0.437

High

542834

TMOD1
Tropomodulin-1

1

5

Small-scale

0.437

High

542851

AP2M1
AP-2 complex subunit mu

1

5

Small-scale

0.437

High

542872

EIF3B
Eukaryotic translation initiation factor 3 subunit B

1

20

Small-scale

0.437

High

542888

AP2B1
AP-2 complex subunit beta

1

13

Small-scale

0.437

High


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Last updated: 11Aug2025