Protein: SLX9
Ribosome biogenesis protein SLX9

Gene: SLX9
Organism: Saccharomyces cerevisiae S288C
Interactions: 100
UniProt ID: P53251

Gene Ontology (top 5):
GO:0000056 - ribosomal small subunit export from nucleus
GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 - nucleus
GO:0005730 - nucleolus
GO:0030490 - maturation of SSU-rRNA

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

798270

ENP1
Essential nuclear protein 1

12

0

Small-scale

0.726

High

918616

TSR1
Ribosome biogenesis protein TSR1

6

0

Small-scale

0.699

High

734705

IMB3
Importin subunit beta-3

4

0

High-throughput

0.664

High

918600

SLX9
Ribosome biogenesis protein SLX9

1

0

High-throughput

0.663

High

918623

RRP12
Ribosomal RNA-processing protein 12

4

0

Small-scale

0.653

High

149870

RS9A
Small ribosomal subunit protein uS4A

3

1

Small-scale

0.633

High

677496

KRR1
KRR1 small subunit processome component

3

0

Small-scale

0.630

High

918626

PNO1
Pre-rRNA-processing protein PNO1

3

0

Small-scale

0.623

High

511827

RS24A
Small ribosomal subunit protein eS24A

3

0

Small-scale

0.622

High

503152

RS22A
Small ribosomal subunit protein uS8A

2

0

Small-scale

0.617

High

820380

RIO2
Serine/threonine-protein kinase RIO2

3

0

Small-scale

0.613

High

747485

RSSA1
Small ribosomal subunit protein uS2A

2

1

Small-scale

0.611

High

512121

RS4A
Small ribosomal subunit protein eS4A

3

0

Small-scale

0.606

High

513125

RS8A
Small ribosomal subunit protein eS8A

3

0

Small-scale

0.606

High

756689

LTV1
Protein LTV1

3

0

Small-scale

0.606

High

836188

DIM1
Dimethyladenosine transferase

3

0

Small-scale

0.606

High

745820

GSP1
GTP-binding nuclear protein GSP1/CNR1

2

0

Small-scale

0.569

High

436471

RS31
Ubiquitin-ribosomal protein eS31 fusion protein [Cleaved into: Ubiquitin; Small ribosomal subunit protein eS31

2

0

Small-scale

0.559

High

436072

RS13
Small ribosomal subunit protein uS15

2

0

Small-scale

0.547

High

442023

RS14A
Small ribosomal subunit protein uS11A

2

0

Small-scale

0.547

High

511684

RS23B
Small ribosomal subunit protein uS12B

2

0

Small-scale

0.547

High

512555

RS6A
Small ribosomal subunit protein eS6A

2

0

Small-scale

0.547

High

513890

RS11B
Small ribosomal subunit protein uS17B

2

0

Small-scale

0.547

High

674736

RS2
Small ribosomal subunit protein uS5

2

0

Small-scale

0.547

High

678246

BUD23
18S rRNA

2

0

High-throughput

0.547

High

689567

RS7A
Small ribosomal subunit protein eS7A

2

0

Small-scale

0.547

High

753488

RS3A1
Small ribosomal subunit protein eS1A

2

0

Small-scale

0.547

High

778445

RS27A
Small ribosomal subunit protein eS27A

2

0

Small-scale

0.547

High

918617

NOB1
20S-pre-rRNA D-site endonuclease NOB1

2

0

Small-scale

0.547

High

918611

HAS1
ATP-dependent RNA helicase HAS1

1

1

High-throughput

0.541

High

435606

RS9B
Small ribosomal subunit protein uS4B

1

1

High-throughput

0.536

High

545685

SSB1
Ribosome-associated molecular chaperone SSB1

2

0

High-throughput

0.528

High

393077

HSP82
ATP-dependent molecular chaperone HSP82

1

0

High-throughput

0.518

High

585983

CSK21
Casein kinase II subunit alpha

1

0

High-throughput

0.518

High

779142

DHR2
Probable ATP-dependent RNA helicase DHR2

1

0

High-throughput

0.518

High

823360

UTP18
U3 small nucleolar RNA-associated protein 18

1

0

High-throughput

0.518

High

825540

UTP25
U3 small nucleolar RNA-associated protein 25

1

0

High-throughput

0.518

High

850998

CSK2B
Casein kinase II subunit beta

1

0

High-throughput

0.518

High

918601

UTP22
U3 small nucleolar RNA-associated protein 22

1

0

High-throughput

0.518

High

918604

SQS1
Protein SQS1

1

0

High-throughput

0.518

High

918605

IMP4
U3 small nucleolar ribonucleoprotein protein IMP4

1

0

High-throughput

0.518

High

918610

UTP6
U3 small nucleolar RNA-associated protein 6

1

0

High-throughput

0.518

High

918612

UTP5
U3 small nucleolar RNA-associated protein 5

1

0

High-throughput

0.518

High

918614

SGD1
Suppressor of glycerol defect protein 1

1

0

High-throughput

0.518

High

918619

SAS10
Something about silencing protein 10

1

0

High-throughput

0.518

High

676956

SRO9
RNA-binding protein SRO9

1

0

High-throughput

0.513

High

722120

XPO1
Exportin-1

1

0

High-throughput

0.513

High

918606

H3
Histone H3

1

0

High-throughput

0.493

High

677856

RDS1
Regulator of drug sensitivity 1

1

0

High-throughput

0.486

High

435243

RS3
Small ribosomal subunit protein uS3

1

0

Small-scale

0.458

High

514166

RS16B
Small ribosomal subunit protein uS9B

1

0

Small-scale

0.458

High

666508

DBP2
ATP-dependent RNA helicase DBP2

1

0

High-throughput

0.458

High

688926

RS5
Small ribosomal subunit protein uS7

1

0

Small-scale

0.458

High

707731

TF2B
Transcription initiation factor IIB

1

0

High-throughput

0.458

High

709434

HRR25
Casein kinase I homolog HRR25

1

0

Small-scale

0.458

High

781230

RL14A
Large ribosomal subunit protein eL14A

1

0

High-throughput

0.458

High

792157

GBLP
Small ribosomal subunit protein RACK1

1

0

Small-scale

0.458

High

802287

RS20
Small ribosomal subunit protein uS10

1

0

Small-scale

0.458

High

808865

UME6
Transcriptional regulatory protein UME6

1

0

High-throughput

0.458

High

826686

DSN1
Kinetochore-associated protein DSN1

1

0

High-throughput

0.458

High

844546

UTP10
U3 small nucleolar RNA-associated protein 10

1

0

High-throughput

0.458

High

874432

RS12
Small ribosomal subunit protein eS12

1

0

Small-scale

0.458

High

918602

TR112
Multifunctional methyltransferase subunit TRM112

1

0

High-throughput

0.458

High

918613

DHR1
Probable ATP-dependent RNA helicase DHR1

1

0

High-throughput

0.458

High

918615

NOC4
Nucleolar complex protein 4

1

0

High-throughput

0.458

High

918620

SCC1
Sister chromatid cohesion protein 1

1

0

High-throughput

0.458

High

918625

RS28A
Small ribosomal subunit protein eS28A

1

0

Small-scale

0.458

High

455170

RS19A
Small ribosomal subunit protein eS19A

1

1

Small-scale

0.437

High

455430

RS19B
Small ribosomal subunit protein eS19B

1

1

High-throughput

0.437

High

601089

RL8A
Large ribosomal subunit protein eL8A

1

1

High-throughput

0.437

High

712627

RL8B
Large ribosomal subunit protein eL8B

1

1

High-throughput

0.437

High

820923

RL13B
Large ribosomal subunit protein eL13B

1

1

High-throughput

0.437

High

858033

RSSA2
Small ribosomal subunit protein uS2B

1

1

High-throughput

0.437

High

918622

RL13A
Large ribosomal subunit protein eL13A

1

1

High-throughput

0.437

High

382239

H4
Histone H4

1

0

High-throughput

0.426

High

527258

HSP72
Heat shock protein SSA2

1

0

High-throughput

0.426

High

531820

RL4A
Large ribosomal subunit protein uL4A

1

0

High-throughput

0.426

High

670956

SIS1
Protein SIS1

1

0

High-throughput

0.426

High

684793

RL5
Large ribosomal subunit protein uL18

1

0

High-throughput

0.426

High

383805

RS17A
Small ribosomal subunit protein eS17A

2

0

Small-scale

0.305

High

453705

PYR1
Multifunctional protein URA2

1

0

High-throughput

0.279

Low

815829

BEM2
GTPase-activating protein BEM2/IPL2

1

0

High-throughput

0.279

Low

502744

RS21A
Small ribosomal subunit protein eS21A

1

0

Small-scale

0.249

Low

514742

RS18A
Small ribosomal subunit protein uS13A

1

0

Small-scale

0.249

Low

515140

RL19B
Large ribosomal subunit protein eL19

1

0

High-throughput

0.249

Low

570086

RL3
Large ribosomal subunit protein uL3

1

0

High-throughput

0.249

Low

812509

LAA1
AP-1 accessory protein LAA1

1

0

High-throughput

0.249

Low

824754

MLP2
Protein MLP2

1

0

High-throughput

0.249

Low

831850

RS29A
Small ribosomal subunit protein uS14A

1

0

Small-scale

0.249

Low

918603

GIS2
Zinc finger protein GIS2

1

0

High-throughput

0.249

Low

918607

RS15
Small ribosomal subunit protein uS19

1

0

Small-scale

0.249

Low

918609

RL6A
Large ribosomal subunit protein eL6A

1

0

High-throughput

0.249

Low

918618

RS10A
Small ribosomal subunit protein eS10A

1

0

Small-scale

0.249

Low

918621

POM33
Pore membrane protein of 33 kDa

1

0

Small-scale

0.249

Low

918624

RS25A
Small ribosomal subunit protein eS25A

1

0

Small-scale

0.249

Low

918608

UBC7
Ubiquitin-conjugating enzyme E2 7

1

0

High-throughput

0.238

Low

511950

RS30A
Small ribosomal subunit protein eS30A

1

0

High-throughput

0.232

Low

592390

VATB
V-type proton ATPase subunit B

1

0

High-throughput

0.232

Low

836807

MPG1
Mannose-1-phosphate guanyltransferase

1

0

High-throughput

0.232

Low


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Last updated: 11Aug2025