Protein: RS16B
Small ribosomal subunit protein uS9B (40S ribosomal protein S16-B) (RP61R)

Gene: RS16B, RPS16B
Organism: Saccharomyces cerevisiae S288C
Interactions: 152
UniProt ID: P0CX52

Gene Ontology (top 5):
GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003723 - RNA binding
GO:0003735 - structural constituent of ribosome
GO:0005829 - cytosol
GO:0006413 - translational initiation

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

514128

GBLP
Small ribosomal subunit protein RACK1

4

8

Small-scale

0.873

High

514105

PWP2
Periodic tryptophan protein 2

3

6

Small-scale

0.827

High

514149

RIO2
Serine/threonine-protein kinase RIO2

3

5

Small-scale

0.827

High

454806

RS19A
Small ribosomal subunit protein eS19A

2

3

High-throughput

0.754

High

514133

RS20
Small ribosomal subunit protein uS10

2

2

High-throughput

0.754

High

514131

ENP1
Essential nuclear protein 1

3

1

High-throughput

0.739

High

514127

RPF2
Ribosome biogenesis protein RPF2

2

1

High-throughput

0.694

High

455363

RS19B
Small ribosomal subunit protein eS19B

1

3

High-throughput

0.618

High

514109

RS5
Small ribosomal subunit protein uS7

1

6

High-throughput

0.618

High

514204

RIO1
Serine/threonine-protein kinase RIO1

1

5

High-throughput

0.618

High

149523

RS9A
Small ribosomal subunit protein uS4A

2

3

High-throughput

0.584

High

383455

RS17A
Small ribosomal subunit protein eS17A

2

2

High-throughput

0.584

High

434735

RS3
Small ribosomal subunit protein uS3

2

2

High-throughput

0.584

High

435706

RS13
Small ribosomal subunit protein uS15

2

1

High-throughput

0.584

High

441641

RS14A
Small ribosomal subunit protein uS11A

2

2

High-throughput

0.584

High

502780

RS22A
Small ribosomal subunit protein uS8A

2

1

High-throughput

0.584

High

512193

RS6A
Small ribosomal subunit protein eS6A

2

2

High-throughput

0.584

High

512752

RS8A
Small ribosomal subunit protein eS8A

2

2

High-throughput

0.584

High

514089

RS18A
Small ribosomal subunit protein uS13A

2

2

High-throughput

0.584

High

514101

RS2
Small ribosomal subunit protein uS5

2

5

High-throughput

0.584

High

514111

RS7A
Small ribosomal subunit protein eS7A

2

2

High-throughput

0.584

High

514118

RSSA1
Small ribosomal subunit protein uS2A

2

6

High-throughput

0.584

High

514120

RS3A1
Small ribosomal subunit protein eS1A

2

3

High-throughput

0.584

High

514122

RS27A
Small ribosomal subunit protein eS27A

2

2

High-throughput

0.584

High

514157

RPN11
Ubiquitin carboxyl-terminal hydrolase RPN11

2

2

High-throughput

0.584

High

514181

RS15
Small ribosomal subunit protein uS19

2

2

High-throughput

0.584

High

514188

DHR1
Probable ATP-dependent RNA helicase DHR1

2

8

High-throughput

0.584

High

514196

RS10A
Small ribosomal subunit protein eS10A

2

2

High-throughput

0.584

High

514088

RS16B
Small ribosomal subunit protein uS9B

2

0

High-throughput

0.559

High

514121

LTV1
Protein LTV1

2

0

High-throughput

0.559

High

514139

RPN10
26S proteasome regulatory subunit RPN10

2

0

Small-scale

0.559

High

514161

RS12
Small ribosomal subunit protein eS12

2

0

High-throughput

0.559

High

514102

GID7
GID complex subunit 7

1

7

High-throughput

0.553

High

514090

SSBP1
Single-stranded nucleic acid-binding protein

2

4

High-throughput

0.543

High

514138

RPF1
Ribosome production factor 1

1

1

High-throughput

0.514

High

514100

SIS1
Protein SIS1

1

0

High-throughput

0.493

High

514113

XPO1
Exportin-1

1

1

High-throughput

0.489

High

382799

RMAR
Small ribosomal subunit protein uS3m

1

1

High-throughput

0.479

High

392086

HSP82
ATP-dependent molecular chaperone HSP82

1

1

High-throughput

0.479

High

409871

RL25
Large ribosomal subunit protein uL23

1

1

High-throughput

0.479

High

433380

RL26A
Large ribosomal subunit protein uL24A

1

3

High-throughput

0.479

High

435503

RS9B
Small ribosomal subunit protein uS4B

1

3

High-throughput

0.479

High

436288

RS31
Ubiquitin-ribosomal protein eS31 fusion protein [Cleaved into: Ubiquitin; Small ribosomal subunit protein eS31

1

4

High-throughput

0.479

High

438584

SC160
Protein SCP160

1

8

High-throughput

0.479

High

481948

C1TM
C-1-tetrahydrofolate synthase, mitochondrial

1

2

High-throughput

0.479

High

502623

RS25B
Small ribosomal subunit protein eS25B

1

2

High-throughput

0.479

High

502700

RS21A
Small ribosomal subunit protein eS21A

1

2

High-throughput

0.479

High

503462

RS28B
Small ribosomal subunit protein eS28B

1

2

High-throughput

0.479

High

503977

RL31A
Large ribosomal subunit protein eL31A

1

1

High-throughput

0.479

High

511619

RS23B
Small ribosomal subunit protein uS12B

1

4

High-throughput

0.479

High

511719

RS24A
Small ribosomal subunit protein eS24A

1

1

High-throughput

0.479

High

511895

RS30A
Small ribosomal subunit protein eS30A

1

2

High-throughput

0.479

High

511998

RS4A
Small ribosomal subunit protein eS4A

1

2

High-throughput

0.479

High

513810

RS11B
Small ribosomal subunit protein uS17B

1

3

High-throughput

0.479

High

514091

SSB1
Ribosome-associated molecular chaperone SSB1

1

3

High-throughput

0.479

High

514093

RS17B
Small ribosomal subunit protein eS17B

1

2

High-throughput

0.479

High

514094

HSC82
ATP-dependent molecular chaperone HSC82

1

1

High-throughput

0.479

High

514097

RS3A2
Small ribosomal subunit protein eS1B

1

3

High-throughput

0.479

High

514103

KRR1
KRR1 small subunit processome component

1

1

High-throughput

0.479

High

514107

CDC48
Cell division control protein 48

1

1

High-throughput

0.479

High

514108

SPB4
ATP-dependent rRNA helicase SPB4

1

7

High-throughput

0.479

High

514110

RL16A
Large ribosomal subunit protein uL13A

1

2

High-throughput

0.479

High

514123

NDK
Nucleoside diphosphate kinase

1

1

High-throughput

0.479

High

514129

UBP13
Ubiquitin carboxyl-terminal hydrolase 13

1

3

High-throughput

0.479

High

514134

RS27B
Small ribosomal subunit protein eS27B

1

2

High-throughput

0.479

High

514144

RS26A
Small ribosomal subunit protein eS26A

1

2

High-throughput

0.479

High

514145

RS26B
Small ribosomal subunit protein eS26B

1

2

High-throughput

0.479

High

514153

RLP7
Ribosome biogenesis protein RLP7

1

1

High-throughput

0.479

High

514154

RS29A
Small ribosomal subunit protein uS14A

1

2

High-throughput

0.479

High

514155

RS29B
Small ribosomal subunit protein uS14B

1

2

High-throughput

0.479

High

514158

RSSA2
Small ribosomal subunit protein uS2B

1

6

High-throughput

0.479

High

514159

RS10B
Small ribosomal subunit protein eS10B

1

2

High-throughput

0.479

High

514160

RS7B
Small ribosomal subunit protein eS7B

1

2

High-throughput

0.479

High

514164

PRP43
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43

1

1

High-throughput

0.479

High

514165

EIF2A
Eukaryotic translation initiation factor 2A

1

2

High-throughput

0.479

High

514169

BRE5
UBP3-associated protein BRE5

1

1

High-throughput

0.479

High

514171

CSL4
Exosome complex component CSL4

1

1

High-throughput

0.479

High

514173

NOP15
Ribosome biogenesis protein 15

1

5

High-throughput

0.479

High

514179

UBP3
Ubiquitin carboxyl-terminal hydrolase 3

1

5

High-throughput

0.479

High

514182

XRN2
5'-3' exoribonuclease 2

1

2

High-throughput

0.479

High

514183

RLI1
Translation initiation factor RLI1

1

2

Small-scale

0.479

High

514185

HAS1
ATP-dependent RNA helicase HAS1

1

7

High-throughput

0.479

High

514189

VMS1
tRNA endonuclease VMS1

1

1

High-throughput

0.479

High

514191

TMA64
Translation machinery-associated protein 64

1

1

High-throughput

0.479

High

514193

TSR1
Ribosome biogenesis protein TSR1

1

2

High-throughput

0.479

High

514198

TMA46
Translation machinery-associated protein 46

1

1

High-throughput

0.479

High

514202

YRA1
RNA annealing protein YRA1

1

4

High-throughput

0.479

High

514205

DBP10
ATP-dependent RNA helicase DBP10

1

9

High-throughput

0.479

High

514207

RS21B
Small ribosomal subunit protein eS21B

1

2

High-throughput

0.479

High

514208

RS25A
Small ribosomal subunit protein eS25A

1

2

High-throughput

0.479

High

514209

RS28A
Small ribosomal subunit protein eS28A

1

2

High-throughput

0.479

High

514125

RRP14
Ribosomal RNA-processing protein 14

1

0

Small-scale

0.460

High

514106

PAT1
Deadenylation-dependent mRNA-decapping factor PAT1

1

0

Small-scale

0.458

High

514130

GID4
GID complex substrate-recognition subunit 4

1

0

High-throughput

0.458

High

514140

STM1
Suppressor protein STM1

1

0

High-throughput

0.458

High

514143

LAA1
AP-1 accessory protein LAA1

1

0

High-throughput

0.458

High

514156

UTP10
U3 small nucleolar RNA-associated protein 10

1

0

High-throughput

0.458

High

514166

SLX9
Ribosome biogenesis protein SLX9

1

0

Small-scale

0.458

High

514200

KAD6
Adenylate kinase isoenzyme 6 homolog FAP7

1

0

Small-scale

0.458

High

514132

KSP1
Serine/threonine-protein kinase KSP1

1

1

High-throughput

0.457

High

514117

RPD3
Histone deacetylase RPD3

1

3

Small-scale

0.457

High

514115

PRP19
Pre-mRNA-processing factor 19

1

8

Small-scale

0.445

High

514148

SSB2
Ribosome-associated molecular chaperone SSB2

1

3

High-throughput

0.445

High

364266

CDK1
Cyclin-dependent kinase 1

1

1

High-throughput

0.437

High

453093

QCR1
Cytochrome b-c1 complex subunit 1, mitochondrial

1

2

Small-scale

0.437

High

514095

PMA2
Plasma membrane ATPase 2

1

1

High-throughput

0.437

High

514099

DBP2
ATP-dependent RNA helicase DBP2

1

2

High-throughput

0.437

High

514119

PRS6A
26S proteasome regulatory subunit 6A

1

4

High-throughput

0.437

High

514141

DHH1
ATP-dependent RNA helicase DHH1

1

7

High-throughput

0.437

High

514146

NSA2
Ribosome biogenesis protein NSA2

1

2

High-throughput

0.437

High

514163

VID30
GID complex subunit 1

1

6

High-throughput

0.437

High

514170

GIS2
Zinc finger protein GIS2

1

3

High-throughput

0.437

High

514176

FAP1
FKBP12-associated protein 1

1

3

High-throughput

0.437

High

514177

ORC1
Origin recognition complex subunit 1

1

3

High-throughput

0.437

High

514178

NUM1
Nuclear migration protein NUM1

1

1

High-throughput

0.437

High

514180

NOP3
Serine/arginine

1

12

High-throughput

0.437

High

514184

TOM1
E3 ubiquitin-protein ligase TOM1

1

5

High-throughput

0.437

High

514187

RUVB1
RuvB-like protein 1

1

1

High-throughput

0.437

High

514190

UTP14
U3 small nucleolar RNA-associated protein 14

1

1

High-throughput

0.437

High

514192

MRD1
Multiple RNA-binding domain-containing protein 1

1

4

High-throughput

0.437

High

514203

MAK21
Ribosome biogenesis protein MAK21

1

1

High-throughput

0.437

High

514206

RUVB2
RuvB-like protein 2

1

1

High-throughput

0.437

High

514199

THP3
Protein THP3

1

1

Small-scale

0.407

High

514092

CAF20
Cap-associated protein CAF20

2

0

High-throughput

0.305

High

514152

DSN1
Kinetochore-associated protein DSN1

2

0

High-throughput

0.305

High

514096

KCC2
Calcium/calmodulin-dependent protein kinase II

1

0

High-throughput

0.249

Low

514098

PSA2
Proteasome subunit alpha type-2

1

0

High-throughput

0.249

Low

514104

BUD23
18S rRNA

1

0

High-throughput

0.249

Low

514112

TF2B
Transcription initiation factor IIB

1

0

High-throughput

0.249

Low

514114

RPC3
DNA-directed RNA polymerase III subunit RPC3

1

0

High-throughput

0.249

Low

514116

SPT16
FACT complex subunit SPT16

1

0

High-throughput

0.249

Low

514124

EAP1
Protein EAP1

1

0

High-throughput

0.249

Low

514126

YKH1
Uncharacterized oxidoreductase YKL071W

1

0

High-throughput

0.249

Low

514135

GOSR1
Golgi SNAP receptor complex member 1

1

0

High-throughput

0.249

Low

514136

OTU2
OTU domain-containing protein 2

1

0

High-throughput

0.249

Low

514137

RPN1
26S proteasome regulatory subunit RPN1

1

0

High-throughput

0.249

Low

514147

TAPT1
Endoplasmic reticulum membrane protein 65

1

0

High-throughput

0.249

Low

514150

TM108
Protein TMA108

1

0

High-throughput

0.249

Low

514151

ULP2
Ubiquitin-like-specific protease 2

1

0

Small-scale

0.249

Low

514162

VATG
V-type proton ATPase subunit G

1

0

High-throughput

0.249

Low

514167

PIL1
Sphingolipid long chain base-responsive protein PIL1

1

0

High-throughput

0.249

Low

514168

PPID
Peptidyl-prolyl cis-trans isomerase CPR6

1

0

Small-scale

0.249

Low

514172

NAT10
RNA cytidine acetyltransferase

1

0

High-throughput

0.249

Low

514174

NST1
Stress response protein NST1

1

0

High-throughput

0.249

Low

514175

SAM50
Sorting assembly machinery 50 kDa subunit

1

0

High-throughput

0.249

Low

514186

FIN1
Filament protein FIN1

1

0

Small-scale

0.249

Low

514194

VAM6
Vacuolar morphogenesis protein 6

1

0

High-throughput

0.249

Low

514195

SGO1
Shugoshin

1

0

High-throughput

0.249

Low

514197

AP3D
AP-3 complex subunit delta

1

0

High-throughput

0.249

Low

514201

TSR3
18S rRNA aminocarboxypropyltransferase

1

0

High-throughput

0.249

Low

514142

YM11
Uncharacterized protein YMR124W

1

0

High-throughput

0.232

Low


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Last updated: 11Aug2025