Protein: SRO9
RNA-binding protein SRO9 (Suppressor of RHO3 protein 9)

Gene: SRO9
Organism: Saccharomyces cerevisiae S288C
Interactions: 173
UniProt ID: P25567

Gene Ontology (top 5):
GO:0003723 - RNA binding
GO:0003729 - mRNA binding
GO:0005634 - nucleus
GO:0005829 - cytosol
GO:0006417 - regulation of translation

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

517915

SSBP1
Single-stranded nucleic acid-binding protein

2

20

High-throughput

0.799

High

403372

PABP
Polyadenylate-binding protein, cytoplasmic and nuclear

2

20

Small-scale

0.754

High

676939

SGN1
RNA-binding protein SGN1

2

18

High-throughput

0.715

High

676960

NRD1
Protein NRD1

1

1

High-throughput

0.691

High

676932

IF4F1
Eukaryotic initiation factor 4F subunit p150

4

8

Small-scale

0.691

High

434861

RS3
Small ribosomal subunit protein uS3

4

4

Small-scale

0.676

High

674443

RS2
Small ribosomal subunit protein uS5

4

7

Small-scale

0.676

High

676955

EIF2A
Eukaryotic translation initiation factor 2A

3

2

High-throughput

0.661

High

558602

CAF20
Cap-associated protein CAF20

4

0

Small-scale

0.651

High

676962

BRE5
UBP3-associated protein BRE5

2

9

High-throughput

0.633

High

632625

DBP4
ATP-dependent RNA helicase HCA4

2

10

High-throughput

0.621

High

676904

NCBP1
Nuclear cap-binding protein complex subunit 1

2

4

High-throughput

0.621

High

676953

PRP43
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43

2

6

High-throughput

0.621

High

676890

NSR1
Nuclear localization sequence-binding protein

1

20

High-throughput

0.618

High

676967

NOP3
Serine/arginine

1

20

Small-scale

0.618

High

676990

NCBP2
Nuclear cap-binding protein subunit 2

1

20

High-throughput

0.618

High

676930

DHH1
ATP-dependent RNA helicase DHH1

2

16

High-throughput

0.614

High

676963

GIS2
Zinc finger protein GIS2

2

4

High-throughput

0.614

High

676901

CBF5
H/ACA ribonucleoprotein complex subunit CBF5

2

4

High-throughput

0.611

High

677003

NOP58
Nucleolar protein 58

2

7

High-throughput

0.611

High

676915

GBLP
Small ribosomal subunit protein RACK1

2

12

Small-scale

0.601

High

676966

UBP3
Ubiquitin carboxyl-terminal hydrolase 3

2

5

High-throughput

0.601

High

676975

CTK1
CTD kinase subunit alpha

2

14

Small-scale

0.594

High

676886

SRO9
RNA-binding protein SRO9

1

12

High-throughput

0.590

High

676994

SLF1
Protein SLF1

1

11

High-throughput

0.590

High

631861

SRP54
Signal recognition particle subunit SRP54

2

3

High-throughput

0.588

High

676938

ULP2
Ubiquitin-like-specific protease 2

2

2

Small-scale

0.586

High

515216

RL35A
Large ribosomal subunit protein uL29A

2

4

Small-scale

0.584

High

676923

RS20
Small ribosomal subunit protein uS10

2

7

Small-scale

0.584

High

676929

XDJ1
DnaJ protein homolog XDJ1

2

5

High-throughput

0.571

High

506236

HAP1
Heme-responsive zinc finger transcription factor HAP1

2

0

Small-scale

0.559

High

664249

SSD1
Protein SSD1

1

1

High-throughput

0.541

High

670222

NAP1
Nucleosome assembly protein

1

3

High-throughput

0.541

High

672089

PUF4
Pumilio homology domain family member 4

1

6

High-throughput

0.541

High

676908

DEF1
RNA polymerase II degradation factor 1

1

1

High-throughput

0.541

High

676926

MPT5
Suppressor protein MPT5

1

5

High-throughput

0.541

High

676935

LSM4
LSM complex subunit LSM4

1

4

High-throughput

0.541

High

676896

NHP2
H/ACA ribonucleoprotein complex subunit NHP2

2

6

High-throughput

0.537

High

523185

HSP71
Heat shock protein SSA1

1

11

High-throughput

0.536

High

543964

SSB1
Ribosome-associated molecular chaperone SSB1

1

11

High-throughput

0.536

High

675746

MAS5
Mitochondrial protein import protein MAS5

1

5

Small-scale

0.536

High

676894

XPO1
Exportin-1

1

5

High-throughput

0.536

High

676916

ANM1
Protein arginine N-methyltransferase 1

1

6

High-throughput

0.536

High

670387

SIS1
Protein SIS1

1

3

High-throughput

0.515

High

676956

SLX9
Ribosome biogenesis protein SLX9

1

0

High-throughput

0.513

High

676982

MHR1
Large ribosomal subunit protein mL67

1

0

High-throughput

0.513

High

448652

SNF1
Carbon catabolite-derepressing protein kinase

1

1

High-throughput

0.500

High

574645

KSS1
Mitogen-activated protein kinase KSS1

1

3

High-throughput

0.500

High

585865

CSK21
Casein kinase II subunit alpha

1

11

High-throughput

0.500

High

676893

HRR25
Casein kinase I homolog HRR25

1

2

High-throughput

0.500

High

676961

PAP2
Poly(A) RNA polymerase protein 2

1

2

High-throughput

0.500

High

676984

PRP11
Pre-mRNA-splicing factor PRP11

1

1

High-throughput

0.500

High

676996

PKH2
Serine/threonine-protein kinase PKH2

1

5

High-throughput

0.500

High

677002

AIR2
Protein AIR2

1

4

High-throughput

0.500

High

677004

SMC6
Structural maintenance of chromosomes protein 6

1

5

High-throughput

0.500

High

676914

RPF2
Ribosome biogenesis protein RPF2

1

1

High-throughput

0.489

High

676979

HSP7Q
Iron-sulfur cluster biogenesis chaperone, mitochondrial

1

13

High-throughput

0.489

High

676965

ACAC
Acetyl-CoA carboxylase

1

4

Small-scale

0.481

High

676987

PSK2
Serine/threonine-protein kinase PSK2

1

0

Small-scale

0.480

High

448927

TOP2
DNA topoisomerase 2

1

0

High-throughput

0.479

High

644655

MAG
DNA-3-methyladenine glycosylase

1

0

High-throughput

0.479

High

149611

RS9A
Small ribosomal subunit protein uS4A

1

4

High-throughput

0.479

High

383540

RS17A
Small ribosomal subunit protein eS17A

1

2

High-throughput

0.479

High

392308

HSP82
ATP-dependent molecular chaperone HSP82

1

7

High-throughput

0.479

High

409958

RL25
Large ribosomal subunit protein uL23

1

4

High-throughput

0.479

High

433475

RL26A
Large ribosomal subunit protein uL24A

1

5

High-throughput

0.479

High

435800

RS13
Small ribosomal subunit protein uS15

1

4

High-throughput

0.479

High

441731

RS14A
Small ribosomal subunit protein uS11A

1

3

High-throughput

0.479

High

453905

IF4E
Eukaryotic translation initiation factor 4E

1

4

Small-scale

0.479

High

454904

RS19A
Small ribosomal subunit protein eS19A

1

6

High-throughput

0.479

High

502875

RS22A
Small ribosomal subunit protein uS8A

1

4

High-throughput

0.479

High

504060

RL31A
Large ribosomal subunit protein eL31A

1

7

High-throughput

0.479

High

512021

RS4A
Small ribosomal subunit protein eS4A

1

5

Small-scale

0.479

High

512283

RS6A
Small ribosomal subunit protein eS6A

1

5

High-throughput

0.479

High

512845

RS8A
Small ribosomal subunit protein eS8A

1

5

High-throughput

0.479

High

514481

RS18A
Small ribosomal subunit protein uS13A

1

4

High-throughput

0.479

High

535982

SEC7
ADP-ribosylation factor guanine nucleotide-exchange factor SEC7

1

2

High-throughput

0.479

High

594220

RPB3
DNA-directed RNA polymerase II subunit RPB3

1

1

High-throughput

0.479

High

646313

RAD53
Serine/threonine-protein kinase RAD53

1

2

High-throughput

0.479

High

676887

KRR1
KRR1 small subunit processome component

1

5

High-throughput

0.479

High

676888

CDC48
Cell division control protein 48

1

4

High-throughput

0.479

High

676889

RS7A
Small ribosomal subunit protein eS7A

1

3

High-throughput

0.479

High

676891

TF2B
Transcription initiation factor IIB

1

3

High-throughput

0.479

High

676892

TF3B
Transcription factor IIIB 70 kDa subunit

1

3

High-throughput

0.479

High

676895

HS104
Heat shock protein 104

1

2

High-throughput

0.479

High

676897

EIF3C
Eukaryotic translation initiation factor 3 subunit C

1

1

High-throughput

0.479

High

676899

RSSA1
Small ribosomal subunit protein uS2A

1

12

High-throughput

0.479

High

676903

RS3A1
Small ribosomal subunit protein eS1A

1

7

High-throughput

0.479

High

676909

RS27A
Small ribosomal subunit protein eS27A

1

4

High-throughput

0.479

High

676910

CENPA
Histone H3-like centromeric protein CSE4

1

6

High-throughput

0.479

High

676911

EAP1
Protein EAP1

1

1

High-throughput

0.479

High

676912

SDS22
Protein phosphatase 1 regulatory subunit SDS22

1

1

High-throughput

0.479

High

676931

LAA1
AP-1 accessory protein LAA1

1

3

High-throughput

0.479

High

676940

DSN1
Kinetochore-associated protein DSN1

1

1

High-throughput

0.479

High

676941

RLP7
Ribosome biogenesis protein RLP7

1

5

High-throughput

0.479

High

676948

ALY2
Arrestin-related trafficking adapter 3

1

7

High-throughput

0.479

High

676951

RS12
Small ribosomal subunit protein eS12

1

3

High-throughput

0.479

High

676957

PESC
Pescadillo homolog

1

4

High-throughput

0.479

High

676968

RS15
Small ribosomal subunit protein uS19

1

4

High-throughput

0.479

High

676969

XRN2
5'-3' exoribonuclease 2

1

1

High-throughput

0.479

High

676971

TOM1
E3 ubiquitin-protein ligase TOM1

1

9

High-throughput

0.479

High

676974

GIS1
Transcriptional activator/repressor GIS1

1

1

High-throughput

0.479

High

676977

DHR1
Probable ATP-dependent RNA helicase DHR1

1

14

High-throughput

0.479

High

676989

RS10A
Small ribosomal subunit protein eS10A

1

5

High-throughput

0.479

High

676995

RRP6
Exosome complex exonuclease RRP6

1

3

High-throughput

0.479

High

676999

SMT3
Ubiquitin-like protein SMT3

1

6

High-throughput

0.479

High

677000

DBP10
ATP-dependent RNA helicase DBP10

1

17

High-throughput

0.479

High

677001

RUVB2
RuvB-like protein 2

1

2

High-throughput

0.479

High

677006

MEX67
mRNA export factor MEX67

1

3

Small-scale

0.479

High

401905

RPB1
DNA-directed RNA polymerase II subunit RPB1

1

0

Small-scale

0.458

High

600657

SEC2
Rab guanine nucleotide exchange factor SEC2

1

0

High-throughput

0.458

High

672854

RRP43
Exosome complex component RRP43

1

0

High-throughput

0.458

High

676900

SMY2
Protein SMY2

1

0

High-throughput

0.458

High

676905

URB1
Nucleolar pre-ribosomal-associated protein 1

1

0

Small-scale

0.458

High

676906

SPT10
Protein SPT10

1

0

High-throughput

0.458

High

676907

SPT21
Protein SPT21

1

0

High-throughput

0.458

High

676913

LAS1
Protein LAS1

1

0

Small-scale

0.458

High

676921

RMD9L
RNA-binding protein RMD9-like, mitochondrial

1

0

High-throughput

0.458

High

676924

SAK1
SNF1-activating kinase 1

1

0

High-throughput

0.458

High

676925

UME6
Transcriptional regulatory protein UME6

1

0

High-throughput

0.458

High

676950

MOG1
Nuclear import protein MOG1

1

0

High-throughput

0.458

High

676954

NMA2
Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 2

1

0

High-throughput

0.458

High

676959

COAD
Phosphopantetheine adenylyltransferase

1

0

High-throughput

0.458

High

676976

PPN1
Endopolyphosphatase

1

0

High-throughput

0.458

High

676980

TFC6
Transcription factor tau 91 kDa subunit

1

0

High-throughput

0.458

High

676988

SGO1
Shugoshin

1

0

High-throughput

0.458

High

676993

TMA46
Translation machinery-associated protein 46

1

0

High-throughput

0.458

High

676934

UTP7
U3 small nucleolar RNA-associated protein 7

1

8

High-throughput

0.457

High

676978

KU80
ATP-dependent DNA helicase II subunit 2

1

3

High-throughput

0.457

High

509427

UBI4P
Polyubiquitin [Cleaved into: Ubiquitin]

1

12

High-throughput

0.445

High

526033

HSP72
Heat shock protein SSA2

1

11

High-throughput

0.445

High

676936

SSB2
Ribosome-associated molecular chaperone SSB2

1

11

High-throughput

0.445

High

676947

JJJ2
J protein JJJ2

1

3

High-throughput

0.445

High

676972

GCN5
Histone acetyltransferase GCN5

1

13

High-throughput

0.445

High

676998

RRP42
Exosome complex component RRP42

1

1

High-throughput

0.445

High

477520

MYO1
Myosin-1

1

3

Small-scale

0.437

High

510239

HSP77
Import motor subunit, mitochondrial

1

12

High-throughput

0.437

High

676898

SRP40
Suppressor protein SRP40

1

1

High-throughput

0.437

High

676944

UTP10
U3 small nucleolar RNA-associated protein 10

1

1

High-throughput

0.437

High

676958

YG3A
Uncharacterized protein YGR130C

1

10

High-throughput

0.437

High

676985

VAM6
Vacuolar morphogenesis protein 6

1

2

High-throughput

0.437

High

676991

AP3D
AP-3 complex subunit delta

1

1

High-throughput

0.437

High

653825

HSP12
12 kDa heat shock protein

1

0

High-throughput

0.426

High

676964

NAF1
H/ACA ribonucleoprotein complex non-core subunit NAF1

1

0

High-throughput

0.426

High

676970

LGE1
Transcriptional regulatory protein LGE1

1

0

High-throughput

0.426

High

676992

NIP7
60S ribosome subunit biogenesis protein NIP7

1

0

High-throughput

0.426

High

577044

SEC63
Protein translocation protein SEC63

1

2

High-throughput

0.407

High

676902

HSP78
Heat shock protein 78, mitochondrial

1

2

High-throughput

0.407

High

676927

TCPD
T-complex protein 1 subunit delta

1

7

High-throughput

0.407

High

676928

TCPZ
T-complex protein 1 subunit zeta

1

6

High-throughput

0.407

High

676943

TCPH
T-complex protein 1 subunit eta

1

6

High-throughput

0.407

High

676945

ERJ5
ER-localized J domain-containing protein 5

1

3

High-throughput

0.407

High

676949

TCPQ
T-complex protein 1 subunit theta

1

7

High-throughput

0.407

High

676942

MPG1
Mannose-1-phosphate guanyltransferase

1

0

High-throughput

0.282

High

571306

RED1
Protein RED1

1

0

High-throughput

0.261

Low

676920

CS111
F-box protein COS111

1

0

High-throughput

0.261

Low

676981

MAG2
E3 ubiquitin-protein ligase MAG2

1

0

High-throughput

0.261

Low

676986

NOP6
Nucleolar protein 6

1

0

High-throughput

0.261

Low

605874

HPR1
THO complex subunit HPR1

1

0

Small-scale

0.249

Low

676917

YBI6
Uncharacterized protein YBL086C

1

0

High-throughput

0.249

Low

676918

NU170
Nucleoporin NUP170

1

0

High-throughput

0.249

Low

676919

PHO88
SRP-independent targeting protein 3

1

0

High-throughput

0.249

Low

676933

SPF1
Endoplasmic reticulum transmembrane helix translocase

1

0

Small-scale

0.249

Low

676937

TM108
Protein TMA108

1

0

High-throughput

0.249

Low

676952

YG51
Uncharacterized protein YGR237C

1

0

High-throughput

0.249

Low

676973

TMA23
Protein TMA23

1

0

High-throughput

0.249

Low

676983

VAC14
Vacuole morphology and inheritance protein 14

1

0

High-throughput

0.249

Low

676997

NYV1
Vacuolar v-SNARE NYV1

1

0

High-throughput

0.249

Low

677005

EFG1P
rRNA-processing protein EFG1

1

0

Small-scale

0.249

Low

677007

ENV10
SRP-independent targeting protein 2

1

0

High-throughput

0.249

Low

676922

KPR3
Ribose-phosphate pyrophosphokinase 3

1

0

High-throughput

0.232

Low

676946

PFD1
Prefoldin subunit 1

1

0

High-throughput

0.232

Low


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Last updated: 11Aug2025